RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 COL16A1Q07092 1604 aaPredicted RBP20.85■□□□□ 0.93
TUBE1-208ENST00000604743 ADGRB1O14514 1584 aa20.85■□□□□ 0.93
TUBE1-208ENST00000604743 DDX17Q92841 729 aaKnown RBP20.84■□□□□ 0.93
TUBE1-208ENST00000604743 PRAM1Q96QH2 718 aa20.84■□□□□ 0.93
TUBE1-208ENST00000604743 POGKQ9P215 609 aa20.84■□□□□ 0.93
TUBE1-208ENST00000604743 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
TUBE1-208ENST00000604743 SIRT1Q96EB6 747 aa20.83■□□□□ 0.93
TUBE1-208ENST00000604743 ORAI2Q96SN7 254 aa20.83■□□□□ 0.93
TUBE1-208ENST00000604743 CDC42BPGQ6DT37 1551 aa20.83■□□□□ 0.92
TUBE1-208ENST00000604743 NHSL1Q5SYE7 1610 aa20.82■□□□□ 0.92
TUBE1-208ENST00000604743 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
TUBE1-208ENST00000604743 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
TUBE1-208ENST00000604743 JCADQ9P266 1359 aa20.81■□□□□ 0.92
TUBE1-208ENST00000604743 DLC1Q96QB1 1528 aa20.79■□□□□ 0.92
TUBE1-208ENST00000604743 ESCO1Q5FWF5 840 aa20.79■□□□□ 0.92
TUBE1-208ENST00000604743 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
TUBE1-208ENST00000604743 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.92
TUBE1-208ENST00000604743 ILDR2Q71H61 639 aa20.77■□□□□ 0.92
TUBE1-208ENST00000604743 KIAA1210Q9ULL0 1709 aa20.77■□□□□ 0.92
TUBE1-208ENST00000604743 NBPF1Q3BBV0 1214 aa20.76■□□□□ 0.91
TUBE1-208ENST00000604743 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
TUBE1-208ENST00000604743 MINK1Q8N4C8 1332 aaPredicted RBP20.76■□□□□ 0.91
TUBE1-208ENST00000604743 ARHGEF28Q8N1W1 1705 aaKnown RBP20.75■□□□□ 0.91
TUBE1-208ENST00000604743 LRRC59Q96AG4 307 aaKnown RBP20.74■□□□□ 0.91
TUBE1-208ENST00000604743 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
TUBE1-208ENST00000604743 SHPRHQ149N8 1683 aa20.73■□□□□ 0.91
TUBE1-208ENST00000604743 NUTM2BA6NNL0 878 aaPredicted RBP20.71■□□□□ 0.91
TUBE1-208ENST00000604743 NUTM2EB1AL46 878 aaPredicted RBP20.71■□□□□ 0.91
TUBE1-208ENST00000604743 FOXO3O43524 673 aa20.71■□□□□ 0.91
TUBE1-208ENST00000604743 XPCQ01831 940 aaPredicted RBP20.71■□□□□ 0.91
TUBE1-208ENST00000604743 NUTM2AQ8IVF1 878 aaPredicted RBP20.71■□□□□ 0.91
TUBE1-208ENST00000604743 SPATA31A6Q5VVP1 1343 aa20.7■□□□□ 0.9
TUBE1-208ENST00000604743 MEX3CQ5U5Q3 659 aaKnown RBP20.69■□□□□ 0.9
TUBE1-208ENST00000604743 NPHP3Q7Z494 1330 aa20.69■□□□□ 0.9
TUBE1-208ENST00000604743 SOS2Q07890 1332 aaPredicted RBP20.68■□□□□ 0.9
TUBE1-208ENST00000604743 ADGRB2O60241 1585 aa20.68■□□□□ 0.9
TUBE1-208ENST00000604743 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
TUBE1-208ENST00000604743 LRP6O75581 1613 aa20.67■□□□□ 0.9
TUBE1-208ENST00000604743 TRPM1Q7Z4N2 1603 aa20.67■□□□□ 0.9
TUBE1-208ENST00000604743 KIF1AQ12756 1690 aa20.66■□□□□ 0.9
TUBE1-208ENST00000604743 PNPLA6Q8IY17 1366 aa20.65■□□□□ 0.9
TUBE1-208ENST00000604743 WASLO00401 505 aaPredicted RBP20.65■□□□□ 0.9
TUBE1-208ENST00000604743 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
TUBE1-208ENST00000604743 PHF8Q9UPP1 1060 aa20.65■□□□□ 0.9
TUBE1-208ENST00000604743 USP32Q8NFA0 1604 aa20.64■□□□□ 0.9
TUBE1-208ENST00000604743 PMFBP1Q8TBY8 1022 aa20.64■□□□□ 0.89
TUBE1-208ENST00000604743 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
TUBE1-208ENST00000604743 PXDNQ92626 1479 aa20.62■□□□□ 0.89
TUBE1-208ENST00000604743 ROCK2O75116 1388 aaKnown RBP20.62■□□□□ 0.89
TUBE1-208ENST00000604743 KRT28Q7Z3Y7 464 aa20.62■□□□□ 0.89
TUBE1-208ENST00000604743 ANKARQ7Z5J8 1434 aa20.61■□□□□ 0.89
TUBE1-208ENST00000604743 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
TUBE1-208ENST00000604743 PRR36Q9H6K5 1346 aa20.6■□□□□ 0.89
TUBE1-208ENST00000604743 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
TUBE1-208ENST00000604743 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
TUBE1-208ENST00000604743 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
TUBE1-208ENST00000604743 QRICH2Q9H0J4 1663 aa20.59■□□□□ 0.89
TUBE1-208ENST00000604743 PSME1Q06323 249 aa20.59■□□□□ 0.89
TUBE1-208ENST00000604743 ADAMTS2O95450 1211 aa20.58■□□□□ 0.89
TUBE1-208ENST00000604743 POTEAQ6S8J7 498 aa20.58■□□□□ 0.89
TUBE1-208ENST00000604743 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
TUBE1-208ENST00000604743 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
TUBE1-208ENST00000604743 C8orf37Q96NL8 207 aa20.56■□□□□ 0.88
TUBE1-208ENST00000604743 ITSN1Q15811 1721 aa20.56■□□□□ 0.88
TUBE1-208ENST00000604743 LMOD2Q6P5Q4 547 aa20.55■□□□□ 0.88
TUBE1-208ENST00000604743 COL22A1Q8NFW1 1626 aaPredicted RBP20.55■□□□□ 0.88
TUBE1-208ENST00000604743 SPATA31A3Q5VYP0 1347 aa20.54■□□□□ 0.88
TUBE1-208ENST00000604743 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
TUBE1-208ENST00000604743 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
TUBE1-208ENST00000604743 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
TUBE1-208ENST00000604743 ATP7BP35670 1465 aa20.53■□□□□ 0.88
TUBE1-208ENST00000604743 CABP2Q9NPB3 220 aa20.52■□□□□ 0.88
TUBE1-208ENST00000604743 AFF2P51816 1311 aa20.52■□□□□ 0.87
TUBE1-208ENST00000604743 GPRASP1Q5JY77 1395 aa20.51■□□□□ 0.87
TUBE1-208ENST00000604743 SOCS7O14512 581 aa20.51■□□□□ 0.87
TUBE1-208ENST00000604743 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
TUBE1-208ENST00000604743 NGLY1Q96IV0 654 aa20.51■□□□□ 0.87
TUBE1-208ENST00000604743 TNS3Q68CZ2 1445 aa20.5■□□□□ 0.87
TUBE1-208ENST00000604743 RALGAPBQ86X10 1494 aa20.49■□□□□ 0.87
TUBE1-208ENST00000604743 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
TUBE1-208ENST00000604743 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
TUBE1-208ENST00000604743 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
TUBE1-208ENST00000604743 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
TUBE1-208ENST00000604743 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
TUBE1-208ENST00000604743 TRPM3Q9HCF6 1732 aaPredicted RBP20.47■□□□□ 0.87
TUBE1-208ENST00000604743 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
TUBE1-208ENST00000604743 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
TUBE1-208ENST00000604743 CABLES1Q8TDN4 633 aa20.47■□□□□ 0.87
TUBE1-208ENST00000604743 EVC2Q86UK5 1308 aa20.46■□□□□ 0.87
TUBE1-208ENST00000604743 ACEP12821 1306 aa20.45■□□□□ 0.86
TUBE1-208ENST00000604743 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
TUBE1-208ENST00000604743 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
TUBE1-208ENST00000604743 ALS2Q96Q42 1657 aa20.43■□□□□ 0.86
TUBE1-208ENST00000604743 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
TUBE1-208ENST00000604743 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
TUBE1-208ENST00000604743 QTRT2Q9H974 415 aaKnown RBP20.42■□□□□ 0.86
TUBE1-208ENST00000604743 USP21Q9UK80 565 aa20.42■□□□□ 0.86
TUBE1-208ENST00000604743 RXRBP28702 533 aa20.41■□□□□ 0.86
TUBE1-208ENST00000604743 CABP1Q9NZU7 370 aa20.41■□□□□ 0.86
TUBE1-208ENST00000604743 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms