RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 RABEP1Q15276 862 aa25.49■■□□□ 1.67
SH3D19-211ENST00000604030 TRAK2O60296 914 aa25.48■■□□□ 1.67
SH3D19-211ENST00000604030 HFM1A2PYH4 1435 aa25.48■■□□□ 1.67
SH3D19-211ENST00000604030 G3V3G9 751 aa25.47■■□□□ 1.67
SH3D19-211ENST00000604030 DCAF8Q5TAQ9 597 aa25.47■■□□□ 1.67
SH3D19-211ENST00000604030 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
SH3D19-211ENST00000604030 HMGN5P82970 282 aaKnown RBP25.46■■□□□ 1.67
SH3D19-211ENST00000604030 CDR1P51861 262 aa25.46■■□□□ 1.67
SH3D19-211ENST00000604030 CCDC173Q0VFZ6 552 aa25.46■■□□□ 1.67
SH3D19-211ENST00000604030 SAFBQ15424 915 aaKnown RBP eCLIP25.46■■□□□ 1.674e-7■■□□□ 12.3
SH3D19-211ENST00000604030 MNS1Q8NEH6 495 aa25.45■■□□□ 1.67
SH3D19-211ENST00000604030 GNAI3P08754 354 aa25.45■■□□□ 1.66
SH3D19-211ENST00000604030 PANK1Q8TE04 598 aa25.44■■□□□ 1.66
SH3D19-211ENST00000604030 PDCP20941 246 aa25.44■■□□□ 1.66
SH3D19-211ENST00000604030 IFT57Q9NWB7 429 aa25.44■■□□□ 1.66
SH3D19-211ENST00000604030 NOL10Q9BSC4 688 aaKnown RBP25.44■■□□□ 1.66
SH3D19-211ENST00000604030 SMG6Q86US8 1419 aaKnown RBP25.44■■□□□ 1.66
SH3D19-211ENST00000604030 ADAMTS8Q9UP79 889 aa25.43■■□□□ 1.66
SH3D19-211ENST00000604030 TSPYL4Q9UJ04 414 aa25.43■■□□□ 1.66
SH3D19-211ENST00000604030 CWC22Q9HCG8 908 aaKnown RBP25.42■■□□□ 1.66
SH3D19-211ENST00000604030 EIF2S2P20042 333 aaKnown RBP25.42■■□□□ 1.66
SH3D19-211ENST00000604030 NOM1Q5C9Z4 860 aaKnown RBP25.42■■□□□ 1.66
SH3D19-211ENST00000604030 CCP110O43303 1012 aa25.42■■□□□ 1.66
SH3D19-211ENST00000604030 HIP1O00291 1037 aa25.41■■□□□ 1.66
SH3D19-211ENST00000604030 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
SH3D19-211ENST00000604030 ERICH2A1L162 156 aa25.4■■□□□ 1.66
SH3D19-211ENST00000604030 AK7Q96M32 723 aa25.4■■□□□ 1.66
SH3D19-211ENST00000604030 PCMTD1Q96MG8 357 aaPredicted RBP25.39■■□□□ 1.66
SH3D19-211ENST00000604030 PPP2R1AP30153 589 aa25.39■■□□□ 1.66
SH3D19-211ENST00000604030 UBTFL1P0CB47 393 aaPredicted RBP25.38■■□□□ 1.65
SH3D19-211ENST00000604030 HSP90B2PQ58FF3 399 aa25.38■■□□□ 1.65
SH3D19-211ENST00000604030 BACH2Q9BYV9 841 aa25.38■■□□□ 1.65
SH3D19-211ENST00000604030 VPS53Q5VIR6 699 aa25.38■■□□□ 1.65
SH3D19-211ENST00000604030 TCP11L2Q8N4U5 519 aa25.38■■□□□ 1.65
SH3D19-211ENST00000604030 NUTM2FA1L443 756 aa25.37■■□□□ 1.65
SH3D19-211ENST00000604030 OLFM4Q6UX06 510 aa25.37■■□□□ 1.65
SH3D19-211ENST00000604030 EFCAB5A4FU69 1503 aa25.37■■□□□ 1.65
SH3D19-211ENST00000604030 ERCC4Q92889 916 aaPredicted RBP25.37■■□□□ 1.65
SH3D19-211ENST00000604030 RALYLQ86SE5 291 aaKnown RBP25.37■■□□□ 1.65
SH3D19-211ENST00000604030 TSPY26PQ9H489 355 aa25.36■■□□□ 1.65
SH3D19-211ENST00000604030 CIZ1Q9ULV3 898 aaPredicted RBP25.36■■□□□ 1.65
SH3D19-211ENST00000604030 PDZRN3Q9UPQ7 1066 aa25.36■■□□□ 1.65
SH3D19-211ENST00000604030 APPP05067 770 aa25.35■■□□□ 1.65
SH3D19-211ENST00000604030 RUFY1Q96T51 708 aa25.35■■□□□ 1.65
SH3D19-211ENST00000604030 R3HCC1Q9Y3T6 440 aaKnown RBP25.35■■□□□ 1.65
SH3D19-211ENST00000604030 NFXL1Q6ZNB6 911 aa25.34■■□□□ 1.65
SH3D19-211ENST00000604030 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
SH3D19-211ENST00000604030 WDR63Q8IWG1 891 aa25.33■■□□□ 1.65
SH3D19-211ENST00000604030 CLASRPQ8N2M8 674 aaKnown RBP25.33■■□□□ 1.65
SH3D19-211ENST00000604030 CWC15Q9P013 229 aaKnown RBP25.32■■□□□ 1.64
SH3D19-211ENST00000604030 XBP1P17861 261 aa25.32■■□□□ 1.64
SH3D19-211ENST00000604030 KIAA1107Q9UPP5 1409 aa25.32■■□□□ 1.64
SH3D19-211ENST00000604030 CCDC30Q5VVM6 783 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 EHBP1L1Q8N3D4 1523 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 CCDC66A2RUB6 948 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 PDIA4P13667 645 aaKnown RBP25.31■■□□□ 1.64
SH3D19-211ENST00000604030 MTHFSP49914 203 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 GAS2L2Q8NHY3 880 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 BRMS1Q9HCU9 246 aa25.31■■□□□ 1.64
SH3D19-211ENST00000604030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.3■■□□□ 1.64
SH3D19-211ENST00000604030 SDF4Q9BRK5 362 aa25.3■■□□□ 1.64
SH3D19-211ENST00000604030 CAVIN1Q6NZI2 390 aaKnown RBP25.3■■□□□ 1.64
SH3D19-211ENST00000604030 PNISRQ8TF01 805 aaKnown RBP25.29■■□□□ 1.64
SH3D19-211ENST00000604030 ZNF428Q96B54 188 aa25.29■■□□□ 1.64
SH3D19-211ENST00000604030 AEBP1Q8IUX7 1158 aa25.28■■□□□ 1.64
SH3D19-211ENST00000604030 KINO60870 393 aaKnown RBP25.27■■□□□ 1.64
SH3D19-211ENST00000604030 CDCA7LQ96GN5 454 aa25.27■■□□□ 1.64
SH3D19-211ENST00000604030 ZNF396Q96N95 335 aaPredicted RBP25.27■■□□□ 1.64
SH3D19-211ENST00000604030 ZNF644Q9H582 1327 aaPredicted RBP25.27■■□□□ 1.64
SH3D19-211ENST00000604030 DHX16O60231 1041 aaKnown RBP25.27■■□□□ 1.64
SH3D19-211ENST00000604030 NEK4P51957 841 aa25.26■■□□□ 1.63
SH3D19-211ENST00000604030 PIP4K2AP48426 406 aaPredicted RBP25.26■■□□□ 1.63
SH3D19-211ENST00000604030 TRIM5Q9C035 493 aa25.26■■□□□ 1.63
SH3D19-211ENST00000604030 GGNBP2Q9H3C7 697 aa25.26■■□□□ 1.63
SH3D19-211ENST00000604030 NCBP3Q53F19 620 aaKnown RBP25.25■■□□□ 1.63
SH3D19-211ENST00000604030 PLEKHH2Q8IVE3 1493 aa25.25■■□□□ 1.63
SH3D19-211ENST00000604030 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
SH3D19-211ENST00000604030 HMOX1P09601 288 aa25.24■■□□□ 1.63
SH3D19-211ENST00000604030 ANKRD1Q15327 319 aa25.24■■□□□ 1.63
SH3D19-211ENST00000604030 RIC3Q7Z5B4 369 aa25.24■■□□□ 1.63
SH3D19-211ENST00000604030 WDR33Q9C0J8 1336 aaKnown RBP25.24■■□□□ 1.63
SH3D19-211ENST00000604030 PDE4CQ08493 712 aa25.24■■□□□ 1.63
SH3D19-211ENST00000604030 EXOSC9Q06265 439 aaKnown RBP25.23■■□□□ 1.63
SH3D19-211ENST00000604030 K7ELQ4 463 aaPredicted RBP25.23■■□□□ 1.63
SH3D19-211ENST00000604030 FSD1Q9BTV5 496 aa25.23■■□□□ 1.63
SH3D19-211ENST00000604030 EVA1CP58658 441 aa25.23■■□□□ 1.63
SH3D19-211ENST00000604030 RAPGEF4Q8WZA2 1011 aa25.22■■□□□ 1.63
SH3D19-211ENST00000604030 GNAI2P04899 355 aa25.22■■□□□ 1.63
SH3D19-211ENST00000604030 NECTIN2Q92692 538 aa25.22■■□□□ 1.63
SH3D19-211ENST00000604030 PRPF40AO75400 957 aaKnown RBP25.22■■□□□ 1.63
SH3D19-211ENST00000604030 CCT4P50991 539 aaKnown RBP25.22■■□□□ 1.63
SH3D19-211ENST00000604030 VPS37DQ86XT2 251 aa25.22■■□□□ 1.63
SH3D19-211ENST00000604030 PSME1Q06323 249 aa25.21■■□□□ 1.63
SH3D19-211ENST00000604030 TWISTNBQ3B726 338 aaPredicted RBP25.21■■□□□ 1.63
SH3D19-211ENST00000604030 RNF214Q8ND24 703 aa25.21■■□□□ 1.63
SH3D19-211ENST00000604030 TCEAL9Q9UHQ7 104 aa25.21■■□□□ 1.63
SH3D19-211ENST00000604030 SART3Q15020 963 aaKnown RBP25.21■■□□□ 1.63
SH3D19-211ENST00000604030 TRIM34Q9BYJ4 488 aa25.21■■□□□ 1.63
SH3D19-211ENST00000604030 SRCIN1Q9C0H9 1055 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms