RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 C1orf167Q5SNV9 1468 aa35.1■■■■□ 3.21
UBE2E3-213ENST00000602959 NHSL1Q5SYE7 1610 aa35.1■■■■□ 3.21
UBE2E3-213ENST00000602959 SIN3AQ96ST3 1273 aa35.08■■■■□ 3.21
UBE2E3-213ENST00000602959 DISP3Q9P2K9 1392 aa35.06■■■■□ 3.2
UBE2E3-213ENST00000602959 FMN2Q9NZ56 1722 aa35.03■■■■□ 3.2
UBE2E3-213ENST00000602959 L3MBTL2Q969R5 705 aa35.01■■■■□ 3.2
UBE2E3-213ENST00000602959 PRAM1Q96QH2 718 aa35■■■■□ 3.19
UBE2E3-213ENST00000602959 ARHGEF28Q8N1W1 1705 aaKnown RBP35■■■■□ 3.19
UBE2E3-213ENST00000602959 NEUROD1Q13562 356 aa34.98■■■■□ 3.19
UBE2E3-213ENST00000602959 ADGRB2O60241 1585 aa34.98■■■■□ 3.19
UBE2E3-213ENST00000602959 JCADQ9P266 1359 aa34.98■■■■□ 3.19
UBE2E3-213ENST00000602959 TRAK1Q9UPV9 953 aa34.96■■■■□ 3.19
UBE2E3-213ENST00000602959 SHPRHQ149N8 1683 aa34.95■■■■□ 3.19
UBE2E3-213ENST00000602959 POGKQ9P215 609 aa34.94■■■■□ 3.18
UBE2E3-213ENST00000602959 ORAI2Q96SN7 254 aa34.93■■■■□ 3.18
UBE2E3-213ENST00000602959 SAFB2Q14151 953 aaKnown RBP eCLIP34.9■■■■□ 3.18
UBE2E3-213ENST00000602959 TRPM1Q7Z4N2 1603 aa34.89■■■■□ 3.18
UBE2E3-213ENST00000602959 NBPF1Q3BBV0 1214 aa34.86■■■■□ 3.17
UBE2E3-213ENST00000602959 DDX17Q92841 729 aaKnown RBP34.86■■■■□ 3.17
UBE2E3-213ENST00000602959 KIF1AQ12756 1690 aa34.86■■■■□ 3.17
UBE2E3-213ENST00000602959 RGPD8O14715 1765 aaPredicted RBP34.85■■■■□ 3.17
UBE2E3-213ENST00000602959 ESCO1Q5FWF5 840 aa34.85■■■■□ 3.17
UBE2E3-213ENST00000602959 NUTM2FA1L443 756 aa34.83■■■■□ 3.17
UBE2E3-213ENST00000602959 SOS2Q07890 1332 aaPredicted RBP34.82■■■■□ 3.17
UBE2E3-213ENST00000602959 USP32Q8NFA0 1604 aa34.82■■■■□ 3.16
UBE2E3-213ENST00000602959 SPATA31A6Q5VVP1 1343 aa34.81■■■■□ 3.16
UBE2E3-213ENST00000602959 LRRC59Q96AG4 307 aaKnown RBP34.81■■■■□ 3.16
UBE2E3-213ENST00000602959 ANKARQ7Z5J8 1434 aa34.81■■■■□ 3.16
UBE2E3-213ENST00000602959 MINK1Q8N4C8 1332 aaPredicted RBP34.8■■■■□ 3.16
UBE2E3-213ENST00000602959 PCGF6Q9BYE7 350 aa34.79■■■■□ 3.16
UBE2E3-213ENST00000602959 TONSLQ96HA7 1378 aa34.78■■■■□ 3.16
UBE2E3-213ENST00000602959 NPHP3Q7Z494 1330 aa34.78■■■■□ 3.16
UBE2E3-213ENST00000602959 PXDNQ92626 1479 aa34.78■■■■□ 3.16
UBE2E3-213ENST00000602959 TULP4Q9NRJ4 1543 aa34.76■■■■□ 3.16
UBE2E3-213ENST00000602959 EIF3AQ14152 1382 aaKnown RBP34.76■■■■□ 3.16
UBE2E3-213ENST00000602959 PHF23Q9BUL5 403 aaPredicted RBP34.76■■■■□ 3.16
UBE2E3-213ENST00000602959 HIRIP3Q9BW71 556 aaPredicted RBP34.76■■■■□ 3.16
UBE2E3-213ENST00000602959 LRP6O75581 1613 aa34.76■■■■□ 3.15
UBE2E3-213ENST00000602959 PNPLA6Q8IY17 1366 aa34.74■■■■□ 3.15
UBE2E3-213ENST00000602959 WASLO00401 505 aaPredicted RBP34.72■■■■□ 3.15
UBE2E3-213ENST00000602959 FOXO3O43524 673 aa34.71■■■■□ 3.15
UBE2E3-213ENST00000602959 ILDR2Q71H61 639 aa34.7■■■■□ 3.15
UBE2E3-213ENST00000602959 ROCK2O75116 1388 aaKnown RBP34.7■■■■□ 3.15
UBE2E3-213ENST00000602959 NBPF8Q3BBV2 869 aa34.69■■■■□ 3.14
UBE2E3-213ENST00000602959 QRICH2Q9H0J4 1663 aa34.69■■■■□ 3.14
UBE2E3-213ENST00000602959 COL22A1Q8NFW1 1626 aaPredicted RBP34.68■■■■□ 3.14
UBE2E3-213ENST00000602959 PHF8Q9UPP1 1060 aa34.68■■■■□ 3.14
UBE2E3-213ENST00000602959 GPRASP1Q5JY77 1395 aa34.67■■■■□ 3.14
UBE2E3-213ENST00000602959 ITSN1Q15811 1721 aa34.67■■■■□ 3.14
UBE2E3-213ENST00000602959 PRR36Q9H6K5 1346 aa34.66■■■■□ 3.14
UBE2E3-213ENST00000602959 CENPJQ9HC77 1338 aaPredicted RBP34.65■■■■□ 3.14
UBE2E3-213ENST00000602959 ATP7BP35670 1465 aa34.65■■■■□ 3.14
UBE2E3-213ENST00000602959 RALGAPBQ86X10 1494 aa34.64■■■■□ 3.14
UBE2E3-213ENST00000602959 RGS17Q9UGC6 210 aaPredicted RBP34.63■■■■□ 3.13
UBE2E3-213ENST00000602959 CLSPNQ9HAW4 1339 aa34.62■■■■□ 3.13
UBE2E3-213ENST00000602959 XPCQ01831 940 aaPredicted RBP34.62■■■■□ 3.13
UBE2E3-213ENST00000602959 TOPAZ1Q8N9V7 1692 aa34.6■■■■□ 3.13
UBE2E3-213ENST00000602959 NUTM2BA6NNL0 878 aaPredicted RBP34.58■■■■□ 3.13
UBE2E3-213ENST00000602959 NUTM2EB1AL46 878 aaPredicted RBP34.58■■■■□ 3.13
UBE2E3-213ENST00000602959 NUTM2AQ8IVF1 878 aaPredicted RBP34.58■■■■□ 3.13
UBE2E3-213ENST00000602959 MEX3CQ5U5Q3 659 aaKnown RBP34.57■■■■□ 3.12
UBE2E3-213ENST00000602959 CDK19Q9BWU1 502 aa34.57■■■■□ 3.12
UBE2E3-213ENST00000602959 KRT28Q7Z3Y7 464 aa34.56■■■■□ 3.12
UBE2E3-213ENST00000602959 PMFBP1Q8TBY8 1022 aa34.55■■■■□ 3.12
UBE2E3-213ENST00000602959 SPATA31A3Q5VYP0 1347 aa34.55■■■■□ 3.12
UBE2E3-213ENST00000602959 NUDT16Q96DE0 195 aaKnown RBP34.54■■■■□ 3.12
UBE2E3-213ENST00000602959 TRPM3Q9HCF6 1732 aaPredicted RBP34.54■■■■□ 3.12
UBE2E3-213ENST00000602959 SBNO1A3KN83 1393 aa34.53■■■■□ 3.12
UBE2E3-213ENST00000602959 TNS3Q68CZ2 1445 aa34.53■■■■□ 3.12
UBE2E3-213ENST00000602959 PSME1Q06323 249 aa34.52■■■■□ 3.12
UBE2E3-213ENST00000602959 CARD11Q9BXL7 1154 aa34.49■■■■□ 3.11
UBE2E3-213ENST00000602959 MARF1Q9Y4F3 1742 aaKnown RBP34.47■■■■□ 3.11
UBE2E3-213ENST00000602959 ALS2Q96Q42 1657 aa34.46■■■■□ 3.11
UBE2E3-213ENST00000602959 POTEAQ6S8J7 498 aa34.45■■■■□ 3.11
UBE2E3-213ENST00000602959 CCDC61Q9Y6R9 512 aa34.45■■■■□ 3.11
UBE2E3-213ENST00000602959 NGDNQ8NEJ9 315 aaKnown RBP34.44■■■■□ 3.1
UBE2E3-213ENST00000602959 TIMELESSQ9UNS1 1208 aa34.44■■■■□ 3.1
UBE2E3-213ENST00000602959 SBNO2Q9Y2G9 1366 aa34.44■■■■□ 3.1
UBE2E3-213ENST00000602959 SRPK2P78362 688 aaKnown RBP34.43■■■■□ 3.1
UBE2E3-213ENST00000602959 POLR3AO14802 1390 aaPredicted RBP34.43■■■■□ 3.1
UBE2E3-213ENST00000602959 ARHGEF10O15013 1369 aa34.43■■■■□ 3.1
UBE2E3-213ENST00000602959 ABCA3Q99758 1704 aa34.42■■■■□ 3.1
UBE2E3-213ENST00000602959 ZNF772Q68DY9 489 aaPredicted RBP34.42■■■■□ 3.1
UBE2E3-213ENST00000602959 EVC2Q86UK5 1308 aa34.41■■■■□ 3.1
UBE2E3-213ENST00000602959 PLEKHG3A1L390 1219 aa34.4■■■■□ 3.1
UBE2E3-213ENST00000602959 ADAMTS2O95450 1211 aa34.4■■■■□ 3.1
UBE2E3-213ENST00000602959 CABP2Q9NPB3 220 aa34.4■■■■□ 3.1
UBE2E3-213ENST00000602959 AFF2P51816 1311 aa34.39■■■■□ 3.1
UBE2E3-213ENST00000602959 C8orf37Q96NL8 207 aa34.39■■■■□ 3.1
UBE2E3-213ENST00000602959 PPIP5K1Q6PFW1 1433 aa34.38■■■■□ 3.09
UBE2E3-213ENST00000602959 CCER1Q8TC90 406 aaPredicted RBP34.36■■■■□ 3.09
UBE2E3-213ENST00000602959 ACEP12821 1306 aa34.35■■■■□ 3.09
UBE2E3-213ENST00000602959 SOCS7O14512 581 aa34.35■■■■□ 3.09
UBE2E3-213ENST00000602959 LMOD2Q6P5Q4 547 aa34.32■■■■□ 3.08
UBE2E3-213ENST00000602959 NGLY1Q96IV0 654 aa34.32■■■■□ 3.08
UBE2E3-213ENST00000602959 CRYBG1Q9Y4K1 1723 aa34.32■■■■□ 3.08
UBE2E3-213ENST00000602959 FNBP4Q8N3X1 1017 aaPredicted RBP34.28■■■■□ 3.08
UBE2E3-213ENST00000602959 ATAD2Q6PL18 1390 aa34.26■■■■□ 3.08
UBE2E3-213ENST00000602959 PAK3O75914 559 aaPredicted RBP34.26■■■■□ 3.08
UBE2E3-213ENST00000602959 CABLES1Q8TDN4 633 aa34.26■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms