RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.26
PPFIA4-213ENST00000601609 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
PPFIA4-213ENST00000601609 POGKQ9P215 609 aa22.94■■□□□ 1.26
PPFIA4-213ENST00000601609 JCADQ9P266 1359 aa22.93■■□□□ 1.26
PPFIA4-213ENST00000601609 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
PPFIA4-213ENST00000601609 ADGRB1O14514 1584 aa22.93■■□□□ 1.26
PPFIA4-213ENST00000601609 NUTM2FA1L443 756 aa22.92■■□□□ 1.26
PPFIA4-213ENST00000601609 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
PPFIA4-213ENST00000601609 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
PPFIA4-213ENST00000601609 SIRT1Q96EB6 747 aa22.9■■□□□ 1.26
PPFIA4-213ENST00000601609 DLC1Q96QB1 1528 aa22.9■■□□□ 1.26
PPFIA4-213ENST00000601609 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
PPFIA4-213ENST00000601609 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
PPFIA4-213ENST00000601609 ESCO1Q5FWF5 840 aa22.88■■□□□ 1.25
PPFIA4-213ENST00000601609 FMN2Q9NZ56 1722 aa22.86■■□□□ 1.25
PPFIA4-213ENST00000601609 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
PPFIA4-213ENST00000601609 KIAA1210Q9ULL0 1709 aa22.85■■□□□ 1.25
PPFIA4-213ENST00000601609 SHPRHQ149N8 1683 aa22.83■■□□□ 1.24
PPFIA4-213ENST00000601609 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
PPFIA4-213ENST00000601609 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
PPFIA4-213ENST00000601609 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
PPFIA4-213ENST00000601609 HIRIP3Q9BW71 556 aaPredicted RBP22.82■■□□□ 1.24
PPFIA4-213ENST00000601609 ILDR2Q71H61 639 aa22.81■■□□□ 1.24
PPFIA4-213ENST00000601609 ARHGEF28Q8N1W1 1705 aaKnown RBP22.81■■□□□ 1.24
PPFIA4-213ENST00000601609 SPATA31A6Q5VVP1 1343 aa22.81■■□□□ 1.24
PPFIA4-213ENST00000601609 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
PPFIA4-213ENST00000601609 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
PPFIA4-213ENST00000601609 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
PPFIA4-213ENST00000601609 NPHP3Q7Z494 1330 aa22.79■■□□□ 1.24
PPFIA4-213ENST00000601609 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
PPFIA4-213ENST00000601609 ADGRB2O60241 1585 aa22.78■■□□□ 1.24
PPFIA4-213ENST00000601609 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
PPFIA4-213ENST00000601609 KIF1AQ12756 1690 aa22.77■■□□□ 1.24
PPFIA4-213ENST00000601609 FOXO3O43524 673 aa22.76■■□□□ 1.23
PPFIA4-213ENST00000601609 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
PPFIA4-213ENST00000601609 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
PPFIA4-213ENST00000601609 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
PPFIA4-213ENST00000601609 RGPD8O14715 1765 aaPredicted RBP22.75■■□□□ 1.23
PPFIA4-213ENST00000601609 LRP6O75581 1613 aa22.75■■□□□ 1.23
PPFIA4-213ENST00000601609 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
PPFIA4-213ENST00000601609 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
PPFIA4-213ENST00000601609 PHF8Q9UPP1 1060 aa22.73■■□□□ 1.23
PPFIA4-213ENST00000601609 TRPM1Q7Z4N2 1603 aa22.72■■□□□ 1.23
PPFIA4-213ENST00000601609 ROCK2O75116 1388 aaKnown RBP22.72■■□□□ 1.23
PPFIA4-213ENST00000601609 ANKARQ7Z5J8 1434 aa22.72■■□□□ 1.23
PPFIA4-213ENST00000601609 WASLO00401 505 aaPredicted RBP22.71■■□□□ 1.23
PPFIA4-213ENST00000601609 PXDNQ92626 1479 aa22.7■■□□□ 1.22
PPFIA4-213ENST00000601609 TULP4Q9NRJ4 1543 aa22.7■■□□□ 1.22
PPFIA4-213ENST00000601609 USP32Q8NFA0 1604 aa22.68■■□□□ 1.22
PPFIA4-213ENST00000601609 PMFBP1Q8TBY8 1022 aa22.68■■□□□ 1.22
PPFIA4-213ENST00000601609 CENPJQ9HC77 1338 aaPredicted RBP22.67■■□□□ 1.22
PPFIA4-213ENST00000601609 RGS17Q9UGC6 210 aaPredicted RBP22.67■■□□□ 1.22
PPFIA4-213ENST00000601609 KRT28Q7Z3Y7 464 aa22.66■■□□□ 1.22
PPFIA4-213ENST00000601609 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
PPFIA4-213ENST00000601609 ADAMTS2O95450 1211 aa22.65■■□□□ 1.22
PPFIA4-213ENST00000601609 PSME1Q06323 249 aa22.65■■□□□ 1.22
PPFIA4-213ENST00000601609 PRR36Q9H6K5 1346 aa22.64■■□□□ 1.22
PPFIA4-213ENST00000601609 ITSN1Q15811 1721 aa22.63■■□□□ 1.21
PPFIA4-213ENST00000601609 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
PPFIA4-213ENST00000601609 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
PPFIA4-213ENST00000601609 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
PPFIA4-213ENST00000601609 CDK19Q9BWU1 502 aa22.63■■□□□ 1.21
PPFIA4-213ENST00000601609 COL22A1Q8NFW1 1626 aaPredicted RBP22.61■■□□□ 1.21
PPFIA4-213ENST00000601609 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
PPFIA4-213ENST00000601609 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
PPFIA4-213ENST00000601609 NGDNQ8NEJ9 315 aaKnown RBP22.61■■□□□ 1.21
PPFIA4-213ENST00000601609 GPRASP1Q5JY77 1395 aa22.61■■□□□ 1.21
PPFIA4-213ENST00000601609 ATP7BP35670 1465 aa22.6■■□□□ 1.21
PPFIA4-213ENST00000601609 TNS3Q68CZ2 1445 aa22.6■■□□□ 1.21
PPFIA4-213ENST00000601609 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
PPFIA4-213ENST00000601609 POTEAQ6S8J7 498 aa22.6■■□□□ 1.21
PPFIA4-213ENST00000601609 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
PPFIA4-213ENST00000601609 SPATA31A3Q5VYP0 1347 aa22.59■■□□□ 1.21
PPFIA4-213ENST00000601609 HAP1P54257 671 aaPredicted RBP22.59■■□□□ 1.21
PPFIA4-213ENST00000601609 AFF2P51816 1311 aa22.58■■□□□ 1.21
PPFIA4-213ENST00000601609 SOCS7O14512 581 aa22.58■■□□□ 1.21
PPFIA4-213ENST00000601609 CARD11Q9BXL7 1154 aa22.58■■□□□ 1.21
PPFIA4-213ENST00000601609 NGLY1Q96IV0 654 aa22.57■■□□□ 1.2
PPFIA4-213ENST00000601609 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
PPFIA4-213ENST00000601609 SBNO1A3KN83 1393 aa22.56■■□□□ 1.2
PPFIA4-213ENST00000601609 CABP2Q9NPB3 220 aa22.55■■□□□ 1.2
PPFIA4-213ENST00000601609 ARHGEF10O15013 1369 aa22.54■■□□□ 1.2
PPFIA4-213ENST00000601609 PAK3O75914 559 aaPredicted RBP22.54■■□□□ 1.2
PPFIA4-213ENST00000601609 TOPAZ1Q8N9V7 1692 aa22.54■■□□□ 1.2
PPFIA4-213ENST00000601609 CCDC61Q9Y6R9 512 aa22.53■■□□□ 1.2
PPFIA4-213ENST00000601609 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
PPFIA4-213ENST00000601609 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
PPFIA4-213ENST00000601609 TRPM3Q9HCF6 1732 aaPredicted RBP22.51■■□□□ 1.19
PPFIA4-213ENST00000601609 PPIP5K1Q6PFW1 1433 aa22.5■■□□□ 1.19
PPFIA4-213ENST00000601609 MARF1Q9Y4F3 1742 aaKnown RBP22.49■■□□□ 1.19
PPFIA4-213ENST00000601609 CABLES1Q8TDN4 633 aa22.49■■□□□ 1.19
PPFIA4-213ENST00000601609 ACEP12821 1306 aa22.49■■□□□ 1.19
PPFIA4-213ENST00000601609 CLSPNQ9HAW4 1339 aa22.49■■□□□ 1.19
PPFIA4-213ENST00000601609 USP21Q9UK80 565 aa22.48■■□□□ 1.19
PPFIA4-213ENST00000601609 RXRBP28702 533 aa22.46■■□□□ 1.19
PPFIA4-213ENST00000601609 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
PPFIA4-213ENST00000601609 ABCA3Q99758 1704 aa22.45■■□□□ 1.19
PPFIA4-213ENST00000601609 QTRT2Q9H974 415 aaKnown RBP22.45■■□□□ 1.18
PPFIA4-213ENST00000601609 POLR3AO14802 1390 aaPredicted RBP22.45■■□□□ 1.18
PPFIA4-213ENST00000601609 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms