RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, human

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC27A1-209	ENST00000600297	SPATA31A6	Q5VVP1	1343 aa		33.58	■■■□□ 2.97
SLC27A1-209	ENST00000600297	STK26	Q9P289	416 aa		33.55	■■■□□ 2.96
SLC27A1-209	ENST00000600297	C1orf167	Q5SNV9	1468 aa		33.55	■■■□□ 2.96
SLC27A1-209	ENST00000600297	LRP6	O75581	1613 aa		33.54	■■■□□ 2.96
SLC27A1-209	ENST00000600297	SIRT1	Q96EB6	747 aa		33.54	■■■□□ 2.96
SLC27A1-209	ENST00000600297	SIN3A	Q96ST3	1273 aa		33.54	■■■□□ 2.96
SLC27A1-209	ENST00000600297	CDC42BPG	Q6DT37	1551 aa		33.52	■■■□□ 2.96
SLC27A1-209	ENST00000600297	MEX3C	Q5U5Q3	659 aa	Known RBP	33.52	■■■□□ 2.96
SLC27A1-209	ENST00000600297	ADGRB1	O14514	1584 aa		33.5	■■■□□ 2.95
SLC27A1-209	ENST00000600297	KIAA1210	Q9ULL0	1709 aa		33.48	■■■□□ 2.95
SLC27A1-209	ENST00000600297	NEUROD1	Q13562	356 aa		33.48	■■■□□ 2.95
SLC27A1-209	ENST00000600297	POTEA	Q6S8J7	498 aa		33.48	■■■□□ 2.95
SLC27A1-209	ENST00000600297	PCGF6	Q9BYE7	350 aa		33.47	■■■□□ 2.95
SLC27A1-209	ENST00000600297	DDX17	Q92841	729 aa	Known RBP	33.46	■■■□□ 2.95
SLC27A1-209	ENST00000600297	L3MBTL2	Q969R5	705 aa		33.46	■■■□□ 2.95
SLC27A1-209	ENST00000600297	DLC1	Q96QB1	1528 aa		33.45	■■■□□ 2.95
SLC27A1-209	ENST00000600297	LRRC59	Q96AG4	307 aa	Known RBP	33.45	■■■□□ 2.95
SLC27A1-209	ENST00000600297	WAPL	Q7Z5K2	1190 aa		33.44	■■■□□ 2.94
SLC27A1-209	ENST00000600297	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.43	■■■□□ 2.94
SLC27A1-209	ENST00000600297	NUTM2E	B1AL46	878 aa	Predicted RBP	33.43	■■■□□ 2.94
SLC27A1-209	ENST00000600297	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.43	■■■□□ 2.94
SLC27A1-209	ENST00000600297	ORAI2	Q96SN7	254 aa		33.42	■■■□□ 2.94
SLC27A1-209	ENST00000600297	FMN2	Q9NZ56	1722 aa		33.39	■■■□□ 2.94
SLC27A1-209	ENST00000600297	PLEKHH1	Q9ULM0	1364 aa		33.38	■■■□□ 2.93
SLC27A1-209	ENST00000600297	PNPLA6	Q8IY17	1366 aa		33.37	■■■□□ 2.93
SLC27A1-209	ENST00000600297	TRAK1	Q9UPV9	953 aa		33.35	■■■□□ 2.93
SLC27A1-209	ENST00000600297	ZNF772	Q68DY9	489 aa	Predicted RBP	33.34	■■■□□ 2.93
SLC27A1-209	ENST00000600297	PRAM1	Q96QH2	718 aa		33.34	■■■□□ 2.93
SLC27A1-209	ENST00000600297	ESCO1	Q5FWF5	840 aa		33.33	■■■□□ 2.93
SLC27A1-209	ENST00000600297	POGK	Q9P215	609 aa		33.33	■■■□□ 2.93
SLC27A1-209	ENST00000600297	SOS2	Q07890	1332 aa	Predicted RBP	33.31	■■■□□ 2.92
SLC27A1-209	ENST00000600297	RGPD8	O14715	1765 aa	Predicted RBP	33.31	■■■□□ 2.92
SLC27A1-209	ENST00000600297	NUTM2F	A1L443	756 aa		33.3	■■■□□ 2.92
SLC27A1-209	ENST00000600297	TONSL	Q96HA7	1378 aa		33.3	■■■□□ 2.92
SLC27A1-209	ENST00000600297	KIF1A	Q12756	1690 aa		33.29	■■■□□ 2.92
SLC27A1-209	ENST00000600297	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.28	■■■□□ 2.92
SLC27A1-209	ENST00000600297	NPHP3	Q7Z494	1330 aa		33.28	■■■□□ 2.92
SLC27A1-209	ENST00000600297	CLSPN	Q9HAW4	1339 aa		33.27	■■■□□ 2.92
SLC27A1-209	ENST00000600297	NBPF1	Q3BBV0	1214 aa		33.26	■■■□□ 2.91
SLC27A1-209	ENST00000600297	TRPM1	Q7Z4N2	1603 aa		33.25	■■■□□ 2.91
SLC27A1-209	ENST00000600297	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.25	■■■□□ 2.91
SLC27A1-209	ENST00000600297	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.24	■■■□□ 2.91
SLC27A1-209	ENST00000600297	AFF2	P51816	1311 aa		33.24	■■■□□ 2.91
SLC27A1-209	ENST00000600297	ADGRB2	O60241	1585 aa		33.23	■■■□□ 2.91
SLC27A1-209	ENST00000600297	C8orf37	Q96NL8	207 aa		33.22	■■■□□ 2.91
SLC27A1-209	ENST00000600297	PXDN	Q92626	1479 aa		33.22	■■■□□ 2.91
SLC27A1-209	ENST00000600297	FOXO3	O43524	673 aa		33.19	■■■□□ 2.9
SLC27A1-209	ENST00000600297	MARF1	Q9Y4F3	1742 aa	Known RBP	33.18	■■■□□ 2.9
SLC27A1-209	ENST00000600297	ADAMTS2	O95450	1211 aa		33.17	■■■□□ 2.9
SLC27A1-209	ENST00000600297	XPC	Q01831	940 aa	Predicted RBP	33.17	■■■□□ 2.9
SLC27A1-209	ENST00000600297	ROCK2	O75116	1388 aa	Known RBP	33.14	■■■□□ 2.9
SLC27A1-209	ENST00000600297	EIF3A	Q14152	1382 aa	Known RBP	33.14	■■■□□ 2.9
SLC27A1-209	ENST00000600297	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.14	■■■□□ 2.9
SLC27A1-209	ENST00000600297	RXRB	P28702	533 aa		33.14	■■■□□ 2.9
SLC27A1-209	ENST00000600297	NBPF8	Q3BBV2	869 aa		33.13	■■■□□ 2.89
SLC27A1-209	ENST00000600297	NGLY1	Q96IV0	654 aa		33.13	■■■□□ 2.89
SLC27A1-209	ENST00000600297	ANKAR	Q7Z5J8	1434 aa		33.11	■■■□□ 2.89
SLC27A1-209	ENST00000600297	WASL	O00401	505 aa	Predicted RBP	33.1	■■■□□ 2.89
SLC27A1-209	ENST00000600297	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.1	■■■□□ 2.89
SLC27A1-209	ENST00000600297	TIMELESS	Q9UNS1	1208 aa		33.1	■■■□□ 2.89
SLC27A1-209	ENST00000600297	USP32	Q8NFA0	1604 aa		33.09	■■■□□ 2.89
SLC27A1-209	ENST00000600297	GPRASP1	Q5JY77	1395 aa		33.09	■■■□□ 2.89
SLC27A1-209	ENST00000600297	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.07	■■■□□ 2.88
SLC27A1-209	ENST00000600297	PHF8	Q9UPP1	1060 aa		33.07	■■■□□ 2.88
SLC27A1-209	ENST00000600297	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.06	■■■□□ 2.88
SLC27A1-209	ENST00000600297	QTRT2	Q9H974	415 aa	Known RBP	33.05	■■■□□ 2.88
SLC27A1-209	ENST00000600297	TULP4	Q9NRJ4	1543 aa		33.05	■■■□□ 2.88
SLC27A1-209	ENST00000600297	RALGAPB	Q86X10	1494 aa		33.05	■■■□□ 2.88
SLC27A1-209	ENST00000600297	KRT28	Q7Z3Y7	464 aa		33.03	■■■□□ 2.88
SLC27A1-209	ENST00000600297	CCER1	Q8TC90	406 aa	Predicted RBP	33.02	■■■□□ 2.88
SLC27A1-209	ENST00000600297	QRICH2	Q9H0J4	1663 aa		33.01	■■■□□ 2.88
SLC27A1-209	ENST00000600297	SPATA31A3	Q5VYP0	1347 aa		33.01	■■■□□ 2.87
SLC27A1-209	ENST00000600297	RBM6	P78332	1123 aa	Known RBP	33	■■■□□ 2.87
SLC27A1-209	ENST00000600297	USP21	Q9UK80	565 aa		33	■■■□□ 2.87
SLC27A1-209	ENST00000600297	PSME1	Q06323	249 aa		32.99	■■■□□ 2.87
SLC27A1-209	ENST00000600297	TNS3	Q68CZ2	1445 aa		32.99	■■■□□ 2.87
SLC27A1-209	ENST00000600297	ITSN1	Q15811	1721 aa		32.99	■■■□□ 2.87
SLC27A1-209	ENST00000600297	CARD11	Q9BXL7	1154 aa		32.98	■■■□□ 2.87
SLC27A1-209	ENST00000600297	CDK19	Q9BWU1	502 aa		32.97	■■■□□ 2.87
SLC27A1-209	ENST00000600297	ABCA3	Q99758	1704 aa		32.96	■■■□□ 2.87
SLC27A1-209	ENST00000600297	PRR36	Q9H6K5	1346 aa		32.96	■■■□□ 2.87
SLC27A1-209	ENST00000600297	RGS12	O14924	1447 aa		32.95	■■■□□ 2.87
SLC27A1-209	ENST00000600297	PMFBP1	Q8TBY8	1022 aa		32.95	■■■□□ 2.87
SLC27A1-209	ENST00000600297	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.94	■■■□□ 2.86
SLC27A1-209	ENST00000600297	ATP7B	P35670	1465 aa		32.93	■■■□□ 2.86
SLC27A1-209	ENST00000600297	NUDT16	Q96DE0	195 aa	Known RBP	32.93	■■■□□ 2.86
SLC27A1-209	ENST00000600297	TRPC5	Q9UL62	973 aa	Predicted RBP	32.93	■■■□□ 2.86
SLC27A1-209	ENST00000600297	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.93	■■■□□ 2.86
SLC27A1-209	ENST00000600297	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.92	■■■□□ 2.86
SLC27A1-209	ENST00000600297	SBNO1	A3KN83	1393 aa		32.92	■■■□□ 2.86
SLC27A1-209	ENST00000600297	HAP1	P54257	671 aa	Predicted RBP	32.91	■■■□□ 2.86
SLC27A1-209	ENST00000600297	LMOD2	Q6P5Q4	547 aa		32.91	■■■□□ 2.86
SLC27A1-209	ENST00000600297	ATRN	O75882	1429 aa		32.89	■■■□□ 2.86
SLC27A1-209	ENST00000600297	ARHGEF10	O15013	1369 aa		32.88	■■■□□ 2.85
SLC27A1-209	ENST00000600297	CCDC61	Q9Y6R9	512 aa		32.88	■■■□□ 2.85
SLC27A1-209	ENST00000600297	PLEKHG5	O94827	1062 aa		32.87	■■■□□ 2.85
SLC27A1-209	ENST00000600297	SBNO2	Q9Y2G9	1366 aa		32.86	■■■□□ 2.85
SLC27A1-209	ENST00000600297	EVC2	Q86UK5	1308 aa		32.86	■■■□□ 2.85
SLC27A1-209	ENST00000600297	SRPK2	P78362	688 aa	Known RBP	32.86	■■■□□ 2.85
SLC27A1-209	ENST00000600297	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.86	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms