RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
SYMPK-215ENST00000600237 MCTP1Q6DN14 999 aa17.66■□□□□ 0.42
SYMPK-215ENST00000600237 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
SYMPK-215ENST00000600237 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
SYMPK-215ENST00000600237 CDC45O75419 566 aa17.65■□□□□ 0.42
SYMPK-215ENST00000600237 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
SYMPK-215ENST00000600237 ERC2O15083 957 aa17.64■□□□□ 0.41
SYMPK-215ENST00000600237 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
SYMPK-215ENST00000600237 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
SYMPK-215ENST00000600237 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
SYMPK-215ENST00000600237 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
SYMPK-215ENST00000600237 MARCH6O60337 910 aa17.64■□□□□ 0.41
SYMPK-215ENST00000600237 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
SYMPK-215ENST00000600237 NLRP6P59044 892 aa17.63■□□□□ 0.41
SYMPK-215ENST00000600237 CPLX1O14810 134 aa17.63■□□□□ 0.41
SYMPK-215ENST00000600237 TRIM29Q14134 588 aa17.63■□□□□ 0.41
SYMPK-215ENST00000600237 PDE3AQ14432 1141 aa17.63■□□□□ 0.41
SYMPK-215ENST00000600237 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
SYMPK-215ENST00000600237 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.62■□□□□ 0.41
SYMPK-215ENST00000600237 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
SYMPK-215ENST00000600237 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
SYMPK-215ENST00000600237 PROSER2Q86WR7 435 aaPredicted RBP17.62■□□□□ 0.41
SYMPK-215ENST00000600237 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
SYMPK-215ENST00000600237 MRE11P49959 708 aa17.62■□□□□ 0.41
SYMPK-215ENST00000600237 PES1O00541 588 aaKnown RBP17.61■□□□□ 0.41
SYMPK-215ENST00000600237 MTHFSP49914 203 aa17.61■□□□□ 0.41
SYMPK-215ENST00000600237 CEP89Q96ST8 783 aa17.61■□□□□ 0.41
SYMPK-215ENST00000600237 A0A0U1RQG5 324 aaPredicted RBP17.61■□□□□ 0.41
SYMPK-215ENST00000600237 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
SYMPK-215ENST00000600237 GPS2Q13227 327 aa17.61■□□□□ 0.41
SYMPK-215ENST00000600237 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
SYMPK-215ENST00000600237 KIAA1107Q9UPP5 1409 aa17.6■□□□□ 0.41
SYMPK-215ENST00000600237 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
SYMPK-215ENST00000600237 TPM2P07951 284 aa17.6■□□□□ 0.41
SYMPK-215ENST00000600237 TRDNQ13061 729 aa17.6■□□□□ 0.41
SYMPK-215ENST00000600237 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
SYMPK-215ENST00000600237 POGZQ7Z3K3 1410 aa17.6■□□□□ 0.41
SYMPK-215ENST00000600237 VPS37CA5D8V6 355 aaPredicted RBP17.59■□□□□ 0.41
SYMPK-215ENST00000600237 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
SYMPK-215ENST00000600237 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
SYMPK-215ENST00000600237 HOOK1Q9UJC3 728 aaKnown RBP17.59■□□□□ 0.41
SYMPK-215ENST00000600237 HMOX1P09601 288 aa17.58■□□□□ 0.41
SYMPK-215ENST00000600237 PRAM1Q96QH2 718 aa17.58■□□□□ 0.41
SYMPK-215ENST00000600237 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
SYMPK-215ENST00000600237 ANKRD20A12PQ8NF67 263 aa17.58■□□□□ 0.4
SYMPK-215ENST00000600237 MSH5O43196 834 aa17.57■□□□□ 0.4
SYMPK-215ENST00000600237 IPO7O95373 1038 aaKnown RBP17.57■□□□□ 0.4
SYMPK-215ENST00000600237 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
SYMPK-215ENST00000600237 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
SYMPK-215ENST00000600237 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
SYMPK-215ENST00000600237 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
SYMPK-215ENST00000600237 GNAI3P08754 354 aa17.56■□□□□ 0.4
SYMPK-215ENST00000600237 TIAM1Q13009 1591 aa17.56■□□□□ 0.4
SYMPK-215ENST00000600237 SASS6Q6UVJ0 657 aa17.56■□□□□ 0.4
SYMPK-215ENST00000600237 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
SYMPK-215ENST00000600237 CCDC73Q6ZRK6 1079 aa17.56■□□□□ 0.4
SYMPK-215ENST00000600237 CCAR2Q8N163 923 aaKnown RBP17.56■□□□□ 0.4
SYMPK-215ENST00000600237 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
SYMPK-215ENST00000600237 DAPK1P53355 1430 aa17.56■□□□□ 0.4
SYMPK-215ENST00000600237 NINLQ9Y2I6 1382 aa17.55■□□□□ 0.4
SYMPK-215ENST00000600237 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
SYMPK-215ENST00000600237 CCDC47Q96A33 483 aaKnown RBP17.55■□□□□ 0.4
SYMPK-215ENST00000600237 MCM2P49736 904 aa17.55■□□□□ 0.4
SYMPK-215ENST00000600237 PNISRQ8TF01 805 aaKnown RBP17.55■□□□□ 0.4
SYMPK-215ENST00000600237 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
SYMPK-215ENST00000600237 RPGRIP1LQ68CZ1 1315 aa17.55■□□□□ 0.4
SYMPK-215ENST00000600237 AMOTL1Q8IY63 956 aa17.54■□□□□ 0.4
SYMPK-215ENST00000600237 MBD3O95983 291 aa17.54■□□□□ 0.4
SYMPK-215ENST00000600237 ANKLE2Q86XL3 938 aa17.54■□□□□ 0.4
SYMPK-215ENST00000600237 APPP05067 770 aa17.54■□□□□ 0.4
SYMPK-215ENST00000600237 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
SYMPK-215ENST00000600237 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
SYMPK-215ENST00000600237 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
SYMPK-215ENST00000600237 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
SYMPK-215ENST00000600237 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
SYMPK-215ENST00000600237 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
SYMPK-215ENST00000600237 NASPP49321 788 aaPredicted RBP17.52■□□□□ 0.4
SYMPK-215ENST00000600237 TRAK2O60296 914 aa17.52■□□□□ 0.4
SYMPK-215ENST00000600237 RABEP1Q15276 862 aa17.52■□□□□ 0.39
SYMPK-215ENST00000600237 NOL10Q9BSC4 688 aaKnown RBP17.52■□□□□ 0.39
SYMPK-215ENST00000600237 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.39
SYMPK-215ENST00000600237 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 PSMA5P28066 241 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 SUPT6HQ7KZ85 1726 aaKnown RBP17.51■□□□□ 0.39
SYMPK-215ENST00000600237 GRIN2AQ12879 1464 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 CLASRPQ8N2M8 674 aaKnown RBP17.51■□□□□ 0.39
SYMPK-215ENST00000600237 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
SYMPK-215ENST00000600237 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
SYMPK-215ENST00000600237 NBPF8Q3BBV2 869 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
SYMPK-215ENST00000600237 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
SYMPK-215ENST00000600237 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
SYMPK-215ENST00000600237 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYMPK-215ENST00000600237 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
SYMPK-215ENST00000600237 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
SYMPK-215ENST00000600237 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
SYMPK-215ENST00000600237 ANKRD30BQ9BXX2 1392 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms