RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 FAM135BQ49AJ0 1406 aa30.68■■■□□ 2.5
LTBP4-224ENST00000599016 RGS17Q9UGC6 210 aaPredicted RBP30.67■■■□□ 2.5
LTBP4-224ENST00000599016 QRICH2Q9H0J4 1663 aa30.67■■■□□ 2.5
LTBP4-224ENST00000599016 PRAM1Q96QH2 718 aa30.66■■■□□ 2.5
LTBP4-224ENST00000599016 HIRIP3Q9BW71 556 aaPredicted RBP30.64■■■□□ 2.5
LTBP4-224ENST00000599016 ROBO2Q9HCK4 1378 aa30.64■■■□□ 2.5
LTBP4-224ENST00000599016 NKTRP30414 1462 aaKnown RBP30.63■■■□□ 2.49
LTBP4-224ENST00000599016 SLC24A1O60721 1099 aa30.63■■■□□ 2.49
LTBP4-224ENST00000599016 LRRC7Q96NW7 1537 aa30.62■■■□□ 2.49
LTBP4-224ENST00000599016 STRCP1A6NGW2 1772 aa30.61■■■□□ 2.49
LTBP4-224ENST00000599016 WAPLQ7Z5K2 1190 aa30.61■■■□□ 2.49
LTBP4-224ENST00000599016 SAFB2Q14151 953 aaKnown RBP eCLIP30.6■■■□□ 2.49
LTBP4-224ENST00000599016 PLEKHH1Q9ULM0 1364 aa30.58■■■□□ 2.49
LTBP4-224ENST00000599016 SBNO2Q9Y2G9 1366 aa30.58■■■□□ 2.49
LTBP4-224ENST00000599016 PROSER2Q86WR7 435 aaPredicted RBP30.56■■■□□ 2.48
LTBP4-224ENST00000599016 TESK2Q96S53 571 aa30.56■■■□□ 2.48
LTBP4-224ENST00000599016 ZNF316A6NFI3 1004 aaPredicted RBP30.55■■■□□ 2.48
LTBP4-224ENST00000599016 TMF1P82094 1093 aa30.54■■■□□ 2.48
LTBP4-224ENST00000599016 MINK1Q8N4C8 1332 aaPredicted RBP30.53■■■□□ 2.48
LTBP4-224ENST00000599016 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.51■■■□□ 2.47
LTBP4-224ENST00000599016 EVC2Q86UK5 1308 aa30.48■■■□□ 2.47
LTBP4-224ENST00000599016 ADGRB2O60241 1585 aa30.47■■■□□ 2.47
LTBP4-224ENST00000599016 CDCA8Q53HL2 280 aa30.47■■■□□ 2.47
LTBP4-224ENST00000599016 C14orf37Q86TY3 774 aa30.47■■■□□ 2.47
LTBP4-224ENST00000599016 NCOA3Q9Y6Q9 1424 aa30.47■■■□□ 2.47
LTBP4-224ENST00000599016 NALCNQ8IZF0 1738 aa30.45■■■□□ 2.47
LTBP4-224ENST00000599016 TMEM94Q12767 1356 aa30.44■■■□□ 2.46
LTBP4-224ENST00000599016 ADGRL3Q9HAR2 1447 aa30.44■■■□□ 2.46
LTBP4-224ENST00000599016 TULP4Q9NRJ4 1543 aa30.43■■■□□ 2.46
LTBP4-224ENST00000599016 POTEAQ6S8J7 498 aa30.42■■■□□ 2.46
LTBP4-224ENST00000599016 RBM33Q96EV2 1170 aaKnown RBP30.42■■■□□ 2.46
LTBP4-224ENST00000599016 XIRP1Q702N8 1843 aaKnown RBP30.41■■■□□ 2.46
LTBP4-224ENST00000599016 C11orf95C9JLR9 678 aaPredicted RBP30.4■■■□□ 2.46
LTBP4-224ENST00000599016 WASLO00401 505 aaPredicted RBP30.4■■■□□ 2.46
LTBP4-224ENST00000599016 CDK19Q9BWU1 502 aa30.39■■■□□ 2.46
LTBP4-224ENST00000599016 CCDC7Q96M83 1385 aa30.39■■■□□ 2.45
LTBP4-224ENST00000599016 CDC42BPGQ6DT37 1551 aa30.38■■■□□ 2.45
LTBP4-224ENST00000599016 SRPK2P78362 688 aaKnown RBP30.38■■■□□ 2.45
LTBP4-224ENST00000599016 PUS7Q96PZ0 661 aaKnown RBP30.38■■■□□ 2.45
LTBP4-224ENST00000599016 POLR3GLQ9BT43 218 aa30.38■■■□□ 2.45
LTBP4-224ENST00000599016 KIF7Q2M1P5 1343 aa30.38■■■□□ 2.45
LTBP4-224ENST00000599016 C19orf44Q9H6X5 657 aa30.36■■■□□ 2.45
LTBP4-224ENST00000599016 WASHC2AQ641Q2 1341 aa30.35■■■□□ 2.45
LTBP4-224ENST00000599016 MSH6P52701 1360 aa30.34■■■□□ 2.45
LTBP4-224ENST00000599016 FMN2Q9NZ56 1722 aa30.33■■■□□ 2.45
LTBP4-224ENST00000599016 CABP2Q9NPB3 220 aa30.33■■■□□ 2.45
LTBP4-224ENST00000599016 DCCP43146 1447 aa30.31■■■□□ 2.44
LTBP4-224ENST00000599016 ATAD2Q6PL18 1390 aa30.31■■■□□ 2.44
LTBP4-224ENST00000599016 ATF3P18847 181 aa30.29■■■□□ 2.44
LTBP4-224ENST00000599016 ITSN1Q15811 1721 aa30.26■■■□□ 2.43
LTBP4-224ENST00000599016 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
LTBP4-224ENST00000599016 NUDT16Q96DE0 195 aaKnown RBP30.26■■■□□ 2.43
LTBP4-224ENST00000599016 CADPS2Q86UW7 1296 aa30.25■■■□□ 2.43
LTBP4-224ENST00000599016 MYOM1P52179 1685 aa30.23■■■□□ 2.43
LTBP4-224ENST00000599016 RGPD8O14715 1765 aaPredicted RBP30.23■■■□□ 2.43
LTBP4-224ENST00000599016 NUTM2FA1L443 756 aa30.23■■■□□ 2.43
LTBP4-224ENST00000599016 ATP7BP35670 1465 aa30.23■■■□□ 2.43
LTBP4-224ENST00000599016 USP32Q8NFA0 1604 aa30.22■■■□□ 2.43
LTBP4-224ENST00000599016 TMC1Q8TDI8 760 aa30.22■■■□□ 2.43
LTBP4-224ENST00000599016 NINLQ9Y2I6 1382 aa30.22■■■□□ 2.43
LTBP4-224ENST00000599016 CCDC61Q9Y6R9 512 aa30.21■■■□□ 2.43
LTBP4-224ENST00000599016 TOPAZ1Q8N9V7 1692 aa30.2■■■□□ 2.43
LTBP4-224ENST00000599016 PRR36Q9H6K5 1346 aa30.2■■■□□ 2.42
LTBP4-224ENST00000599016 PPIP5K1Q6PFW1 1433 aa30.18■■■□□ 2.42
LTBP4-224ENST00000599016 DDX10Q13206 875 aaKnown RBP30.17■■■□□ 2.42
LTBP4-224ENST00000599016 MST1RQ04912 1400 aa30.15■■■□□ 2.42
LTBP4-224ENST00000599016 SLC12A5Q9H2X9 1139 aa30.15■■■□□ 2.42
LTBP4-224ENST00000599016 CABP1Q9NZU7 370 aa30.15■■■□□ 2.42
LTBP4-224ENST00000599016 C1orf167Q5SNV9 1468 aa30.14■■■□□ 2.42
LTBP4-224ENST00000599016 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
LTBP4-224ENST00000599016 TERF2IPQ9NYB0 399 aa30.11■■■□□ 2.41
LTBP4-224ENST00000599016 PLEKHG3A1L390 1219 aa30.1■■■□□ 2.41
LTBP4-224ENST00000599016 HDGFL2Q7Z4V5 671 aaPredicted RBP30.1■■■□□ 2.41
LTBP4-224ENST00000599016 KIF1AQ12756 1690 aa30.09■■■□□ 2.41
LTBP4-224ENST00000599016 PANK3Q9H999 370 aa30.09■■■□□ 2.41
LTBP4-224ENST00000599016 PHF8Q9UPP1 1060 aa30.09■■■□□ 2.41
LTBP4-224ENST00000599016 ROBO1Q9Y6N7 1651 aa30.08■■■□□ 2.41
LTBP4-224ENST00000599016 ANKRD36BQ8N2N9 1353 aa30.08■■■□□ 2.41
LTBP4-224ENST00000599016 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
LTBP4-224ENST00000599016 AKAP12Q02952 1782 aa30.07■■■□□ 2.4
LTBP4-224ENST00000599016 NGDNQ8NEJ9 315 aaKnown RBP30.06■■■□□ 2.4
LTBP4-224ENST00000599016 PMFBP1Q8TBY8 1022 aa30.06■■■□□ 2.4
LTBP4-224ENST00000599016 ORAI2Q96SN7 254 aa30.05■■■□□ 2.4
LTBP4-224ENST00000599016 ACEP12821 1306 aa30.04■■■□□ 2.4
LTBP4-224ENST00000599016 ZNF692Q9BU19 519 aaPredicted RBP30.04■■■□□ 2.4
LTBP4-224ENST00000599016 CD163L1Q9NR16 1453 aa30.03■■■□□ 2.4
LTBP4-224ENST00000599016 A0A1W2PP64 1363 aa30.03■■■□□ 2.4
LTBP4-224ENST00000599016 CPSF1Q10570 1443 aaKnown RBP30.02■■■□□ 2.4
LTBP4-224ENST00000599016 POLR3AO14802 1390 aaPredicted RBP30.02■■■□□ 2.4
LTBP4-224ENST00000599016 MON2Q7Z3U7 1717 aa30.01■■■□□ 2.39
LTBP4-224ENST00000599016 KTN1Q86UP2 1357 aaKnown RBP30.01■■■□□ 2.39
LTBP4-224ENST00000599016 KNSTRNQ9Y448 316 aa29.98■■■□□ 2.39
LTBP4-224ENST00000599016 BRINP3Q76B58 766 aa29.96■■■□□ 2.39
LTBP4-224ENST00000599016 NSD3Q9BZ95 1437 aa29.96■■■□□ 2.39
LTBP4-224ENST00000599016 PSME1Q06323 249 aa29.94■■■□□ 2.38
LTBP4-224ENST00000599016 CARD14Q9BXL6 1004 aa29.94■■■□□ 2.38
LTBP4-224ENST00000599016 USP6P35125 1406 aa29.94■■■□□ 2.38
LTBP4-224ENST00000599016 EDC4Q6P2E9 1401 aaKnown RBP29.94■■■□□ 2.38
LTBP4-224ENST00000599016 JCADQ9P266 1359 aa29.93■■■□□ 2.38
LTBP4-224ENST00000599016 PER1O15534 1290 aaPredicted RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms