RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 C19orf44Q9H6X5 657 aa28.64■■■□□ 2.17
IRF3-221ENST00000598808 DLC1Q96QB1 1528 aa28.63■■■□□ 2.17
IRF3-221ENST00000598808 TIMELESSQ9UNS1 1208 aa28.62■■■□□ 2.17
IRF3-221ENST00000598808 FAM135BQ49AJ0 1406 aa28.62■■■□□ 2.17
IRF3-221ENST00000598808 HSPA1LP34931 641 aa28.61■■■□□ 2.17
IRF3-221ENST00000598808 ARHGEF28Q8N1W1 1705 aaKnown RBP28.6■■■□□ 2.17
IRF3-221ENST00000598808 RALGAPBQ86X10 1494 aa28.6■■■□□ 2.17
IRF3-221ENST00000598808 CADPS2Q86UW7 1296 aa28.59■■■□□ 2.17
IRF3-221ENST00000598808 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
IRF3-221ENST00000598808 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
IRF3-221ENST00000598808 DCCP43146 1447 aa28.56■■■□□ 2.16
IRF3-221ENST00000598808 MINK1Q8N4C8 1332 aaPredicted RBP28.54■■■□□ 2.16
IRF3-221ENST00000598808 HIRIP3Q9BW71 556 aaPredicted RBP28.53■■■□□ 2.16
IRF3-221ENST00000598808 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
IRF3-221ENST00000598808 CDC42BPGQ6DT37 1551 aa28.52■■■□□ 2.16
IRF3-221ENST00000598808 EIF3AQ14152 1382 aaKnown RBP28.51■■■□□ 2.15
IRF3-221ENST00000598808 ROBO1Q9Y6N7 1651 aa28.5■■■□□ 2.15
IRF3-221ENST00000598808 NUTM2FA1L443 756 aa28.49■■■□□ 2.15
IRF3-221ENST00000598808 GPRASP1Q5JY77 1395 aa28.49■■■□□ 2.15
IRF3-221ENST00000598808 CENPJQ9HC77 1338 aaPredicted RBP28.48■■■□□ 2.15
IRF3-221ENST00000598808 MST1RQ04912 1400 aa28.47■■■□□ 2.15
IRF3-221ENST00000598808 QRICH2Q9H0J4 1663 aa28.46■■■□□ 2.15
IRF3-221ENST00000598808 ADGRB2O60241 1585 aa28.43■■■□□ 2.14
IRF3-221ENST00000598808 FMN2Q9NZ56 1722 aa28.43■■■□□ 2.14
IRF3-221ENST00000598808 C1orf167Q5SNV9 1468 aa28.41■■■□□ 2.14
IRF3-221ENST00000598808 DISP3Q9P2K9 1392 aa28.38■■■□□ 2.13
IRF3-221ENST00000598808 ESCO1Q5FWF5 840 aa28.37■■■□□ 2.13
IRF3-221ENST00000598808 BRINP3Q76B58 766 aa28.37■■■□□ 2.13
IRF3-221ENST00000598808 WASLO00401 505 aaPredicted RBP28.36■■■□□ 2.13
IRF3-221ENST00000598808 MED1Q15648 1581 aaPredicted RBP28.36■■■□□ 2.13
IRF3-221ENST00000598808 ORAI2Q96SN7 254 aa28.34■■■□□ 2.13
IRF3-221ENST00000598808 USP47Q96K76 1375 aa28.34■■■□□ 2.13
IRF3-221ENST00000598808 TULP4Q9NRJ4 1543 aa28.32■■■□□ 2.12
IRF3-221ENST00000598808 SRPK2P78362 688 aaKnown RBP28.32■■■□□ 2.12
IRF3-221ENST00000598808 CDK19Q9BWU1 502 aa28.32■■■□□ 2.12
IRF3-221ENST00000598808 PHLPP1O60346 1717 aa28.32■■■□□ 2.12
IRF3-221ENST00000598808 RGPD8O14715 1765 aaPredicted RBP28.31■■■□□ 2.12
IRF3-221ENST00000598808 ANKARQ7Z5J8 1434 aa28.29■■■□□ 2.12
IRF3-221ENST00000598808 EVC2Q86UK5 1308 aa28.29■■■□□ 2.12
IRF3-221ENST00000598808 ST20-MTHFSA0A0A6YYL1 179 aa28.28■■■□□ 2.12
IRF3-221ENST00000598808 USP32Q8NFA0 1604 aa28.28■■■□□ 2.12
IRF3-221ENST00000598808 COL16A1Q07092 1604 aaPredicted RBP28.28■■■□□ 2.12
IRF3-221ENST00000598808 DDX17Q92841 729 aaKnown RBP28.27■■■□□ 2.12
IRF3-221ENST00000598808 AHDC1Q5TGY3 1603 aaPredicted RBP28.27■■■□□ 2.12
IRF3-221ENST00000598808 CABP2Q9NPB3 220 aa28.26■■■□□ 2.11
IRF3-221ENST00000598808 KIF1AQ12756 1690 aa28.25■■■□□ 2.11
IRF3-221ENST00000598808 PRR36Q9H6K5 1346 aa28.25■■■□□ 2.11
IRF3-221ENST00000598808 NHSL1Q5SYE7 1610 aa28.24■■■□□ 2.11
IRF3-221ENST00000598808 NUDT16Q96DE0 195 aaKnown RBP28.24■■■□□ 2.11
IRF3-221ENST00000598808 PHF8Q9UPP1 1060 aa28.24■■■□□ 2.11
IRF3-221ENST00000598808 ITSN1Q15811 1721 aa28.24■■■□□ 2.11
IRF3-221ENST00000598808 ATP7BP35670 1465 aa28.24■■■□□ 2.11
IRF3-221ENST00000598808 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
IRF3-221ENST00000598808 FOXO3O43524 673 aa28.21■■■□□ 2.11
IRF3-221ENST00000598808 SBNO2Q9Y2G9 1366 aa28.21■■■□□ 2.11
IRF3-221ENST00000598808 XPCQ01831 940 aaPredicted RBP28.21■■■□□ 2.11
IRF3-221ENST00000598808 NPHP3Q7Z494 1330 aa28.2■■■□□ 2.1
IRF3-221ENST00000598808 EIF4G2P78344 907 aaKnown RBP eCLIP28.19■■■□□ 2.12e-7■■■■■ 34.3
IRF3-221ENST00000598808 ILDR2Q71H61 639 aa28.19■■■□□ 2.1
IRF3-221ENST00000598808 NGDNQ8NEJ9 315 aaKnown RBP28.17■■■□□ 2.1
IRF3-221ENST00000598808 TOPAZ1Q8N9V7 1692 aa28.16■■■□□ 2.1
IRF3-221ENST00000598808 CCDC61Q9Y6R9 512 aa28.15■■■□□ 2.1
IRF3-221ENST00000598808 PPIP5K1Q6PFW1 1433 aa28.15■■■□□ 2.1
IRF3-221ENST00000598808 HSPA5P11021 654 aaKnown RBP28.15■■■□□ 2.1
IRF3-221ENST00000598808 TESK2Q96S53 571 aa28.15■■■□□ 2.1
IRF3-221ENST00000598808 PSME1Q06323 249 aa28.14■■■□□ 2.09
IRF3-221ENST00000598808 JCADQ9P266 1359 aa28.13■■■□□ 2.09
IRF3-221ENST00000598808 TMF1P82094 1093 aa28.13■■■□□ 2.09
IRF3-221ENST00000598808 SLC24A1O60721 1099 aa28.11■■■□□ 2.09
IRF3-221ENST00000598808 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
IRF3-221ENST00000598808 SHPRHQ149N8 1683 aa28.1■■■□□ 2.09
IRF3-221ENST00000598808 PXDNQ92626 1479 aa28.1■■■□□ 2.09
IRF3-221ENST00000598808 KRT28Q7Z3Y7 464 aa28.1■■■□□ 2.09
IRF3-221ENST00000598808 TMC1Q8TDI8 760 aa28.09■■■□□ 2.09
IRF3-221ENST00000598808 LRRC59Q96AG4 307 aaKnown RBP28.09■■■□□ 2.09
IRF3-221ENST00000598808 SOS2Q07890 1332 aaPredicted RBP28.09■■■□□ 2.09
IRF3-221ENST00000598808 CABP1Q9NZU7 370 aa28.08■■■□□ 2.09
IRF3-221ENST00000598808 ACEP12821 1306 aa28.07■■■□□ 2.08
IRF3-221ENST00000598808 LMOD2Q6P5Q4 547 aa28.07■■■□□ 2.08
IRF3-221ENST00000598808 POLR3GLQ9BT43 218 aa28.07■■■□□ 2.08
IRF3-221ENST00000598808 PAK3O75914 559 aaPredicted RBP28.05■■■□□ 2.08
IRF3-221ENST00000598808 PLEKHG3A1L390 1219 aa28.03■■■□□ 2.08
IRF3-221ENST00000598808 PLEKHG5O94827 1062 aa28.03■■■□□ 2.08
IRF3-221ENST00000598808 PHF23Q9BUL5 403 aaPredicted RBP28.03■■■□□ 2.08
IRF3-221ENST00000598808 LRP6O75581 1613 aa28.02■■■□□ 2.08
IRF3-221ENST00000598808 CDCA8Q53HL2 280 aa28.02■■■□□ 2.08
IRF3-221ENST00000598808 POLR3AO14802 1390 aaPredicted RBP28.01■■■□□ 2.08
IRF3-221ENST00000598808 TNS3Q68CZ2 1445 aa28.01■■■□□ 2.07
IRF3-221ENST00000598808 NUTM2BA6NNL0 878 aaPredicted RBP28■■■□□ 2.07
IRF3-221ENST00000598808 NUTM2EB1AL46 878 aaPredicted RBP28■■■□□ 2.07
IRF3-221ENST00000598808 NUTM2AQ8IVF1 878 aaPredicted RBP28■■■□□ 2.07
IRF3-221ENST00000598808 RGS17Q9UGC6 210 aaPredicted RBP28■■■□□ 2.07
IRF3-221ENST00000598808 PNPLA6Q8IY17 1366 aa28■■■□□ 2.07
IRF3-221ENST00000598808 SPATA31A6Q5VVP1 1343 aa27.99■■■□□ 2.07
IRF3-221ENST00000598808 SBNO1A3KN83 1393 aa27.97■■■□□ 2.07
IRF3-221ENST00000598808 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
IRF3-221ENST00000598808 TRPM3Q9HCF6 1732 aaPredicted RBP27.97■■■□□ 2.07
IRF3-221ENST00000598808 PUS7Q96PZ0 661 aaKnown RBP27.95■■■□□ 2.07
IRF3-221ENST00000598808 SLC12A5Q9H2X9 1139 aa27.95■■■□□ 2.07
IRF3-221ENST00000598808 HDGFL2Q7Z4V5 671 aaPredicted RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms