RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 YEATS2Q9ULM3 1422 aa25.66■■□□□ 1.7
GRAMD1A-207ENST00000598118 VGFO15240 615 aaPredicted RBP25.66■■□□□ 1.7
GRAMD1A-207ENST00000598118 IDI1Q13907 227 aa25.66■■□□□ 1.7
GRAMD1A-207ENST00000598118 TULP4Q9NRJ4 1543 aa25.65■■□□□ 1.7
GRAMD1A-207ENST00000598118 MYO5BQ9ULV0 1848 aa25.65■■□□□ 1.7
GRAMD1A-207ENST00000598118 ARHGAP31Q2M1Z3 1444 aa25.65■■□□□ 1.7
GRAMD1A-207ENST00000598118 E9PSI1 815 aa25.65■■□□□ 1.7
GRAMD1A-207ENST00000598118 USP32Q8NFA0 1604 aa25.64■■□□□ 1.7
GRAMD1A-207ENST00000598118 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.64■■□□□ 1.7
GRAMD1A-207ENST00000598118 BCAR3O75815 825 aa25.63■■□□□ 1.69
GRAMD1A-207ENST00000598118 NPM2Q86SE8 214 aaKnown RBP25.62■■□□□ 1.69
GRAMD1A-207ENST00000598118 WWC1Q8IX03 1113 aa25.61■■□□□ 1.69
GRAMD1A-207ENST00000598118 SENP3Q9H4L4 574 aaPredicted RBP25.61■■□□□ 1.69
GRAMD1A-207ENST00000598118 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
GRAMD1A-207ENST00000598118 EVC2Q86UK5 1308 aa25.61■■□□□ 1.69
GRAMD1A-207ENST00000598118 ZBTB47Q9UFB7 747 aaPredicted RBP25.6■■□□□ 1.69
GRAMD1A-207ENST00000598118 CGNL1Q0VF96 1302 aa25.59■■□□□ 1.69
GRAMD1A-207ENST00000598118 SAFB2Q14151 953 aaKnown RBP eCLIP25.58■■□□□ 1.69
GRAMD1A-207ENST00000598118 CABP2Q9NPB3 220 aa25.58■■□□□ 1.69
GRAMD1A-207ENST00000598118 MTHFSP49914 203 aa25.58■■□□□ 1.69
GRAMD1A-207ENST00000598118 CENPQQ7L2Z9 268 aaPredicted RBP25.58■■□□□ 1.69
GRAMD1A-207ENST00000598118 PUS7Q96PZ0 661 aaKnown RBP25.57■■□□□ 1.68
GRAMD1A-207ENST00000598118 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
GRAMD1A-207ENST00000598118 PREX1Q8TCU6 1659 aa25.56■■□□□ 1.68
GRAMD1A-207ENST00000598118 SLC52A1Q9NWF4 448 aa25.56■■□□□ 1.68
GRAMD1A-207ENST00000598118 RRP7AQ9Y3A4 280 aaKnown RBP25.56■■□□□ 1.68
GRAMD1A-207ENST00000598118 NEUROD2Q15784 382 aa25.55■■□□□ 1.68
GRAMD1A-207ENST00000598118 ZFYVE9O95405 1425 aa25.55■■□□□ 1.68
GRAMD1A-207ENST00000598118 RUNDC1Q96C34 613 aa25.54■■□□□ 1.68
GRAMD1A-207ENST00000598118 IQSEC2Q5JU85 1478 aa25.54■■□□□ 1.68
GRAMD1A-207ENST00000598118 TMEM131LA2VDJ0 1609 aa25.54■■□□□ 1.68
GRAMD1A-207ENST00000598118 STK26Q9P289 416 aa25.54■■□□□ 1.68
GRAMD1A-207ENST00000598118 TCP11L2Q8N4U5 519 aa25.53■■□□□ 1.68
GRAMD1A-207ENST00000598118 NBR1Q14596 966 aa25.52■■□□□ 1.68
GRAMD1A-207ENST00000598118 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
GRAMD1A-207ENST00000598118 FBXO31Q5XUX0 539 aaPredicted RBP25.49■■□□□ 1.67
GRAMD1A-207ENST00000598118 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
GRAMD1A-207ENST00000598118 A0A1W2PP64 1363 aa25.47■■□□□ 1.67
GRAMD1A-207ENST00000598118 NSD2O96028 1365 aa25.47■■□□□ 1.67
GRAMD1A-207ENST00000598118 PTPRMP28827 1452 aa25.47■■□□□ 1.67
GRAMD1A-207ENST00000598118 CFAP53Q96M91 514 aa25.47■■□□□ 1.67
GRAMD1A-207ENST00000598118 SRPK2P78362 688 aaKnown RBP25.45■■□□□ 1.66
GRAMD1A-207ENST00000598118 ABCC11Q96J66 1382 aa25.43■■□□□ 1.66
GRAMD1A-207ENST00000598118 PDE3AQ14432 1141 aa25.43■■□□□ 1.66
GRAMD1A-207ENST00000598118 MINK1Q8N4C8 1332 aaPredicted RBP25.43■■□□□ 1.66
GRAMD1A-207ENST00000598118 WDR63Q8IWG1 891 aa25.42■■□□□ 1.66
GRAMD1A-207ENST00000598118 PANK1Q8TE04 598 aa25.42■■□□□ 1.66
GRAMD1A-207ENST00000598118 PRAM1Q96QH2 718 aa25.42■■□□□ 1.66
GRAMD1A-207ENST00000598118 YTHDC2Q9H6S0 1430 aaKnown RBP25.41■■□□□ 1.66
GRAMD1A-207ENST00000598118 IGHDP01880 384 aa25.41■■□□□ 1.66
GRAMD1A-207ENST00000598118 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
GRAMD1A-207ENST00000598118 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
GRAMD1A-207ENST00000598118 GGNBP2Q9H3C7 697 aa25.4■■□□□ 1.66
GRAMD1A-207ENST00000598118 RARSP54136 660 aaKnown RBP25.4■■□□□ 1.66
GRAMD1A-207ENST00000598118 CCDC27Q2M243 656 aa25.4■■□□□ 1.66
GRAMD1A-207ENST00000598118 COG6Q9Y2V7 657 aa25.4■■□□□ 1.66
GRAMD1A-207ENST00000598118 C8orf34Q49A92 452 aa25.39■■□□□ 1.66
GRAMD1A-207ENST00000598118 NINLQ9Y2I6 1382 aa25.39■■□□□ 1.66
GRAMD1A-207ENST00000598118 CD163L1Q9NR16 1453 aa25.39■■□□□ 1.66
GRAMD1A-207ENST00000598118 RGS3P49796 1198 aa25.39■■□□□ 1.65
GRAMD1A-207ENST00000598118 FAM69CQ0P6D2 419 aa25.38■■□□□ 1.65
GRAMD1A-207ENST00000598118 FRAT1Q92837 279 aaPredicted RBP25.38■■□□□ 1.65
GRAMD1A-207ENST00000598118 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
GRAMD1A-207ENST00000598118 CLTCQ00610 1675 aaKnown RBP25.38■■□□□ 1.65
GRAMD1A-207ENST00000598118 ALKQ9UM73 1620 aa25.38■■□□□ 1.65
GRAMD1A-207ENST00000598118 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
GRAMD1A-207ENST00000598118 POGKQ9P215 609 aa25.37■■□□□ 1.65
GRAMD1A-207ENST00000598118 ADGRB2O60241 1585 aa25.37■■□□□ 1.65
GRAMD1A-207ENST00000598118 FAM161AQ3B820 660 aa25.37■■□□□ 1.65
GRAMD1A-207ENST00000598118 ATAD2Q6PL18 1390 aa25.36■■□□□ 1.65
GRAMD1A-207ENST00000598118 FYB1O15117 783 aa25.35■■□□□ 1.65
GRAMD1A-207ENST00000598118 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
GRAMD1A-207ENST00000598118 TNNQ9UQP3 1299 aa25.35■■□□□ 1.65
GRAMD1A-207ENST00000598118 ANKRD26Q9UPS8 1709 aa25.35■■□□□ 1.65
GRAMD1A-207ENST00000598118 DIP2BQ9P265 1576 aa25.34■■□□□ 1.65
GRAMD1A-207ENST00000598118 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
GRAMD1A-207ENST00000598118 COL3A1P02461 1466 aaPredicted RBP25.34■■□□□ 1.65
GRAMD1A-207ENST00000598118 NLRP1Q9C000 1473 aa25.34■■□□□ 1.65
GRAMD1A-207ENST00000598118 RLBP1P12271 317 aa25.32■■□□□ 1.64
GRAMD1A-207ENST00000598118 TERF2IPQ9NYB0 399 aa25.32■■□□□ 1.64
GRAMD1A-207ENST00000598118 DEKP35659 375 aaKnown RBP25.32■■□□□ 1.64
GRAMD1A-207ENST00000598118 NCBP3Q53F19 620 aaKnown RBP25.32■■□□□ 1.64
GRAMD1A-207ENST00000598118 PLEKHF1Q96S99 279 aa25.32■■□□□ 1.64
GRAMD1A-207ENST00000598118 CDK19Q9BWU1 502 aa25.31■■□□□ 1.64
GRAMD1A-207ENST00000598118 STAG3Q9UJ98 1225 aa25.31■■□□□ 1.64
GRAMD1A-207ENST00000598118 ARHGEF40Q8TER5 1519 aa25.3■■□□□ 1.64
GRAMD1A-207ENST00000598118 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
GRAMD1A-207ENST00000598118 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
GRAMD1A-207ENST00000598118 MYH16Q9H6N6 1097 aa25.28■■□□□ 1.64
GRAMD1A-207ENST00000598118 MED14O60244 1454 aa25.28■■□□□ 1.64
GRAMD1A-207ENST00000598118 CABP1Q9NZU7 370 aa25.28■■□□□ 1.64
GRAMD1A-207ENST00000598118 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
GRAMD1A-207ENST00000598118 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
GRAMD1A-207ENST00000598118 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
GRAMD1A-207ENST00000598118 DDRGK1Q96HY6 314 aa25.27■■□□□ 1.64
GRAMD1A-207ENST00000598118 REREQ9P2R6 1566 aa25.26■■□□□ 1.63
GRAMD1A-207ENST00000598118 A2ML1A8K2U0 1454 aa25.25■■□□□ 1.63
GRAMD1A-207ENST00000598118 TMPOP42166 694 aaKnown RBP25.25■■□□□ 1.63
GRAMD1A-207ENST00000598118 TSR2Q969E8 191 aaKnown RBP25.25■■□□□ 1.63
GRAMD1A-207ENST00000598118 AGLP35573 1532 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms