RNA–Protein interactions for RNA: ENST00000597816.5

LTBP4-218, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-218ENST00000597816 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-218ENST00000597816 PRAM1Q96QH2 718 aa23.3■■□□□ 1.32
LTBP4-218ENST00000597816 ORAI2Q96SN7 254 aa23.3■■□□□ 1.32
LTBP4-218ENST00000597816 POGKQ9P215 609 aa23.3■■□□□ 1.32
LTBP4-218ENST00000597816 TRAK1Q9UPV9 953 aa23.3■■□□□ 1.32
LTBP4-218ENST00000597816 NEUROD1Q13562 356 aa23.29■■□□□ 1.32
LTBP4-218ENST00000597816 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
LTBP4-218ENST00000597816 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
LTBP4-218ENST00000597816 COL16A1Q07092 1604 aaPredicted RBP23.27■■□□□ 1.32
LTBP4-218ENST00000597816 L3MBTL2Q969R5 705 aa23.27■■□□□ 1.32
LTBP4-218ENST00000597816 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
LTBP4-218ENST00000597816 ESCO1Q5FWF5 840 aa23.26■■□□□ 1.31
LTBP4-218ENST00000597816 LRRC59Q96AG4 307 aaKnown RBP23.26■■□□□ 1.31
LTBP4-218ENST00000597816 DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
LTBP4-218ENST00000597816 CDC42BPGQ6DT37 1551 aa23.26■■□□□ 1.31
LTBP4-218ENST00000597816 DDX17Q92841 729 aaKnown RBP23.25■■□□□ 1.31
LTBP4-218ENST00000597816 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
LTBP4-218ENST00000597816 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
LTBP4-218ENST00000597816 NHSL1Q5SYE7 1610 aa23.21■■□□□ 1.31
LTBP4-218ENST00000597816 NBPF1Q3BBV0 1214 aa23.19■■□□□ 1.3
LTBP4-218ENST00000597816 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-218ENST00000597816 KIAA1210Q9ULL0 1709 aa23.17■■□□□ 1.3
LTBP4-218ENST00000597816 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
LTBP4-218ENST00000597816 FOXO3O43524 673 aa23.17■■□□□ 1.3
LTBP4-218ENST00000597816 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-218ENST00000597816 FMN2Q9NZ56 1722 aa23.16■■□□□ 1.3
LTBP4-218ENST00000597816 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
LTBP4-218ENST00000597816 SHPRHQ149N8 1683 aa23.15■■□□□ 1.3
LTBP4-218ENST00000597816 RGS17Q9UGC6 210 aaPredicted RBP23.14■■□□□ 1.29
LTBP4-218ENST00000597816 NUTM2BA6NNL0 878 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-218ENST00000597816 NUTM2EB1AL46 878 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-218ENST00000597816 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
LTBP4-218ENST00000597816 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-218ENST00000597816 WASLO00401 505 aaPredicted RBP23.12■■□□□ 1.29
LTBP4-218ENST00000597816 PHF8Q9UPP1 1060 aa23.12■■□□□ 1.29
LTBP4-218ENST00000597816 PNPLA6Q8IY17 1366 aa23.11■■□□□ 1.29
LTBP4-218ENST00000597816 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
LTBP4-218ENST00000597816 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.29
LTBP4-218ENST00000597816 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.29
LTBP4-218ENST00000597816 KRT28Q7Z3Y7 464 aa23.08■■□□□ 1.29
LTBP4-218ENST00000597816 EIF3AQ14152 1382 aaKnown RBP23.08■■□□□ 1.29
LTBP4-218ENST00000597816 ADGRB2O60241 1585 aa23.08■■□□□ 1.29
LTBP4-218ENST00000597816 LRP6O75581 1613 aa23.08■■□□□ 1.28
LTBP4-218ENST00000597816 RGPD8O14715 1765 aaPredicted RBP23.07■■□□□ 1.28
LTBP4-218ENST00000597816 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
LTBP4-218ENST00000597816 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
LTBP4-218ENST00000597816 PSME1Q06323 249 aa23.06■■□□□ 1.28
LTBP4-218ENST00000597816 PXDNQ92626 1479 aa23.05■■□□□ 1.28
LTBP4-218ENST00000597816 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
LTBP4-218ENST00000597816 KIF1AQ12756 1690 aa23.05■■□□□ 1.28
LTBP4-218ENST00000597816 NBPF8Q3BBV2 869 aa23.04■■□□□ 1.28
LTBP4-218ENST00000597816 POTEAQ6S8J7 498 aa23.04■■□□□ 1.28
LTBP4-218ENST00000597816 CDK19Q9BWU1 502 aa23.04■■□□□ 1.28
LTBP4-218ENST00000597816 CENPJQ9HC77 1338 aaPredicted RBP23.04■■□□□ 1.28
LTBP4-218ENST00000597816 PRR36Q9H6K5 1346 aa23.03■■□□□ 1.28
LTBP4-218ENST00000597816 ROCK2O75116 1388 aaKnown RBP23.02■■□□□ 1.28
LTBP4-218ENST00000597816 ZNF772Q68DY9 489 aaPredicted RBP23.02■■□□□ 1.28
LTBP4-218ENST00000597816 NUDT16Q96DE0 195 aaKnown RBP23.02■■□□□ 1.28
LTBP4-218ENST00000597816 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
LTBP4-218ENST00000597816 TULP4Q9NRJ4 1543 aa23.01■■□□□ 1.27
LTBP4-218ENST00000597816 TRPM1Q7Z4N2 1603 aa23■■□□□ 1.27
LTBP4-218ENST00000597816 USP32Q8NFA0 1604 aa23■■□□□ 1.27
LTBP4-218ENST00000597816 ADAMTS2O95450 1211 aa22.98■■□□□ 1.27
LTBP4-218ENST00000597816 NGDNQ8NEJ9 315 aaKnown RBP22.97■■□□□ 1.27
LTBP4-218ENST00000597816 C8orf37Q96NL8 207 aa22.97■■□□□ 1.27
LTBP4-218ENST00000597816 NGLY1Q96IV0 654 aa22.96■■□□□ 1.27
LTBP4-218ENST00000597816 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
LTBP4-218ENST00000597816 AFF2P51816 1311 aa22.96■■□□□ 1.27
LTBP4-218ENST00000597816 SBNO1A3KN83 1393 aa22.96■■□□□ 1.27
LTBP4-218ENST00000597816 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
LTBP4-218ENST00000597816 COL22A1Q8NFW1 1626 aaPredicted RBP22.95■■□□□ 1.26
LTBP4-218ENST00000597816 SRPK2P78362 688 aaKnown RBP22.94■■□□□ 1.26
LTBP4-218ENST00000597816 LMOD2Q6P5Q4 547 aa22.93■■□□□ 1.26
LTBP4-218ENST00000597816 CARD11Q9BXL7 1154 aa22.93■■□□□ 1.26
LTBP4-218ENST00000597816 ATP7BP35670 1465 aa22.92■■□□□ 1.26
LTBP4-218ENST00000597816 TNS3Q68CZ2 1445 aa22.92■■□□□ 1.26
LTBP4-218ENST00000597816 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
LTBP4-218ENST00000597816 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
LTBP4-218ENST00000597816 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
LTBP4-218ENST00000597816 CABP2Q9NPB3 220 aa22.9■■□□□ 1.26
LTBP4-218ENST00000597816 EVC2Q86UK5 1308 aa22.89■■□□□ 1.26
LTBP4-218ENST00000597816 QTRT2Q9H974 415 aaKnown RBP22.89■■□□□ 1.25
LTBP4-218ENST00000597816 ITSN1Q15811 1721 aa22.88■■□□□ 1.25
LTBP4-218ENST00000597816 QRICH2Q9H0J4 1663 aa22.88■■□□□ 1.25
LTBP4-218ENST00000597816 RXRBP28702 533 aa22.88■■□□□ 1.25
LTBP4-218ENST00000597816 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
LTBP4-218ENST00000597816 TIMELESSQ9UNS1 1208 aa22.88■■□□□ 1.25
LTBP4-218ENST00000597816 ACEP12821 1306 aa22.87■■□□□ 1.25
LTBP4-218ENST00000597816 PAK3O75914 559 aaPredicted RBP22.87■■□□□ 1.25
LTBP4-218ENST00000597816 HAP1P54257 671 aaPredicted RBP22.87■■□□□ 1.25
LTBP4-218ENST00000597816 RALGAPBQ86X10 1494 aa22.86■■□□□ 1.25
LTBP4-218ENST00000597816 CABLES1Q8TDN4 633 aa22.86■■□□□ 1.25
LTBP4-218ENST00000597816 USP21Q9UK80 565 aa22.86■■□□□ 1.25
LTBP4-218ENST00000597816 PLEKHG5O94827 1062 aa22.85■■□□□ 1.25
LTBP4-218ENST00000597816 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
LTBP4-218ENST00000597816 CABP1Q9NZU7 370 aa22.83■■□□□ 1.25
LTBP4-218ENST00000597816 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
LTBP4-218ENST00000597816 TRPM3Q9HCF6 1732 aaPredicted RBP22.82■■□□□ 1.24
LTBP4-218ENST00000597816 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
LTBP4-218ENST00000597816 CCER1Q8TC90 406 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms