RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 EIF4G2P78344 907 aaKnown RBP eCLIP27.01■■□□□ 1.91
C19orf48-207ENST00000596655 DDX10Q13206 875 aaKnown RBP27.01■■□□□ 1.91
C19orf48-207ENST00000596655 CFAP70Q5T0N1 1121 aa27.01■■□□□ 1.91
C19orf48-207ENST00000596655 COL16A1Q07092 1604 aaPredicted RBP27■■□□□ 1.91
C19orf48-207ENST00000596655 DCAF11Q8TEB1 546 aa27■■□□□ 1.91
C19orf48-207ENST00000596655 ABCC11Q96J66 1382 aa26.99■■□□□ 1.91
C19orf48-207ENST00000596655 HSPA5P11021 654 aaKnown RBP26.99■■□□□ 1.91
C19orf48-207ENST00000596655 KDM2AQ9Y2K7 1162 aa26.99■■□□□ 1.91
C19orf48-207ENST00000596655 AHDC1Q5TGY3 1603 aaPredicted RBP26.99■■□□□ 1.91
C19orf48-207ENST00000596655 HIRIP3Q9BW71 556 aaPredicted RBP26.98■■□□□ 1.91
C19orf48-207ENST00000596655 BRINP3Q76B58 766 aa26.98■■□□□ 1.91
C19orf48-207ENST00000596655 CDC42BPGQ6DT37 1551 aa26.95■■□□□ 1.9
C19orf48-207ENST00000596655 NHSL1Q5SYE7 1610 aa26.94■■□□□ 1.9
C19orf48-207ENST00000596655 WAPLQ7Z5K2 1190 aa26.94■■□□□ 1.9
C19orf48-207ENST00000596655 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
C19orf48-207ENST00000596655 RALGAPBQ86X10 1494 aa26.93■■□□□ 1.9
C19orf48-207ENST00000596655 ADGRB1O14514 1584 aa26.93■■□□□ 1.9
C19orf48-207ENST00000596655 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
C19orf48-207ENST00000596655 STAC3Q96MF2 364 aa26.92■■□□□ 1.9
C19orf48-207ENST00000596655 JCADQ9P266 1359 aa26.88■■□□□ 1.89
C19orf48-207ENST00000596655 WASHC2AQ641Q2 1341 aa26.88■■□□□ 1.89
C19orf48-207ENST00000596655 DLC1Q96QB1 1528 aa26.87■■□□□ 1.89
C19orf48-207ENST00000596655 ILDR2Q71H61 639 aa26.87■■□□□ 1.89
C19orf48-207ENST00000596655 SIRT1Q96EB6 747 aa26.87■■□□□ 1.89
C19orf48-207ENST00000596655 SHPRHQ149N8 1683 aa26.86■■□□□ 1.89
C19orf48-207ENST00000596655 FMN2Q9NZ56 1722 aa26.86■■□□□ 1.89
C19orf48-207ENST00000596655 YTHDC1Q96MU7 727 aaKnown RBP26.84■■□□□ 1.89
C19orf48-207ENST00000596655 KIAA1210Q9ULL0 1709 aa26.83■■□□□ 1.89
C19orf48-207ENST00000596655 CCER2I3L3R5 266 aa26.83■■□□□ 1.88
C19orf48-207ENST00000596655 DDX17Q92841 729 aaKnown RBP26.83■■□□□ 1.88
C19orf48-207ENST00000596655 ORAI2Q96SN7 254 aa26.83■■□□□ 1.88
C19orf48-207ENST00000596655 PHF23Q9BUL5 403 aaPredicted RBP26.83■■□□□ 1.88
C19orf48-207ENST00000596655 PRAM1Q96QH2 718 aa26.82■■□□□ 1.88
C19orf48-207ENST00000596655 CCDC7Q96M83 1385 aa26.82■■□□□ 1.88
C19orf48-207ENST00000596655 SAFB2Q14151 953 aaKnown RBP eCLIP26.79■■□□□ 1.88
C19orf48-207ENST00000596655 TRAK1Q9UPV9 953 aa26.79■■□□□ 1.88
C19orf48-207ENST00000596655 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
C19orf48-207ENST00000596655 NUTM2FA1L443 756 aa26.78■■□□□ 1.88
C19orf48-207ENST00000596655 RGPD8O14715 1765 aaPredicted RBP26.78■■□□□ 1.88
C19orf48-207ENST00000596655 ANP32CO43423 234 aa26.77■■□□□ 1.88
C19orf48-207ENST00000596655 POGKQ9P215 609 aa26.77■■□□□ 1.88
C19orf48-207ENST00000596655 TRPM1Q7Z4N2 1603 aa26.77■■□□□ 1.88
C19orf48-207ENST00000596655 USP47Q96K76 1375 aa26.77■■□□□ 1.88
C19orf48-207ENST00000596655 ADGRB2O60241 1585 aa26.75■■□□□ 1.87
C19orf48-207ENST00000596655 ESCO1Q5FWF5 840 aa26.75■■□□□ 1.87
C19orf48-207ENST00000596655 LRP6O75581 1613 aa26.74■■□□□ 1.87
C19orf48-207ENST00000596655 SPATA31A6Q5VVP1 1343 aa26.74■■□□□ 1.87
C19orf48-207ENST00000596655 C11orf95C9JLR9 678 aaPredicted RBP26.73■■□□□ 1.87
C19orf48-207ENST00000596655 LRRC59Q96AG4 307 aaKnown RBP26.73■■□□□ 1.87
C19orf48-207ENST00000596655 KIF1AQ12756 1690 aa26.71■■□□□ 1.87
C19orf48-207ENST00000596655 SOS2Q07890 1332 aaPredicted RBP26.7■■□□□ 1.87
C19orf48-207ENST00000596655 GPRASP1Q5JY77 1395 aa26.7■■□□□ 1.86
C19orf48-207ENST00000596655 RGS17Q9UGC6 210 aaPredicted RBP26.69■■□□□ 1.86
C19orf48-207ENST00000596655 KIF7Q2M1P5 1343 aa26.69■■□□□ 1.86
C19orf48-207ENST00000596655 USP32Q8NFA0 1604 aa26.69■■□□□ 1.86
C19orf48-207ENST00000596655 PNPLA6Q8IY17 1366 aa26.69■■□□□ 1.86
C19orf48-207ENST00000596655 NBPF1Q3BBV0 1214 aa26.68■■□□□ 1.86
C19orf48-207ENST00000596655 NPHP3Q7Z494 1330 aa26.67■■□□□ 1.86
C19orf48-207ENST00000596655 MINK1Q8N4C8 1332 aaPredicted RBP26.67■■□□□ 1.86
C19orf48-207ENST00000596655 PXDNQ92626 1479 aa26.67■■□□□ 1.86
C19orf48-207ENST00000596655 FOXO3O43524 673 aa26.65■■□□□ 1.86
C19orf48-207ENST00000596655 NUTM2BA6NNL0 878 aaPredicted RBP26.65■■□□□ 1.86
C19orf48-207ENST00000596655 NUTM2EB1AL46 878 aaPredicted RBP26.65■■□□□ 1.86
C19orf48-207ENST00000596655 NUTM2AQ8IVF1 878 aaPredicted RBP26.65■■□□□ 1.86
C19orf48-207ENST00000596655 MEX3CQ5U5Q3 659 aaKnown RBP26.63■■□□□ 1.85
C19orf48-207ENST00000596655 ANKARQ7Z5J8 1434 aa26.63■■□□□ 1.85
C19orf48-207ENST00000596655 XPCQ01831 940 aaPredicted RBP26.62■■□□□ 1.85
C19orf48-207ENST00000596655 CARD11Q9BXL7 1154 aa26.61■■□□□ 1.85
C19orf48-207ENST00000596655 COL22A1Q8NFW1 1626 aaPredicted RBP26.61■■□□□ 1.85
C19orf48-207ENST00000596655 TULP4Q9NRJ4 1543 aa26.61■■□□□ 1.85
C19orf48-207ENST00000596655 ROCK2O75116 1388 aaKnown RBP26.59■■□□□ 1.85
C19orf48-207ENST00000596655 PHF8Q9UPP1 1060 aa26.59■■□□□ 1.85
C19orf48-207ENST00000596655 EIF3AQ14152 1382 aaKnown RBP26.58■■□□□ 1.85
C19orf48-207ENST00000596655 WASLO00401 505 aaPredicted RBP26.58■■□□□ 1.85
C19orf48-207ENST00000596655 GTF3C3Q9Y5Q9 886 aa26.58■■□□□ 1.85
C19orf48-207ENST00000596655 SOCS7O14512 581 aa26.57■■□□□ 1.84
C19orf48-207ENST00000596655 POTEAQ6S8J7 498 aa26.56■■□□□ 1.84
C19orf48-207ENST00000596655 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
C19orf48-207ENST00000596655 PRR36Q9H6K5 1346 aa26.55■■□□□ 1.84
C19orf48-207ENST00000596655 QRICH2Q9H0J4 1663 aa26.55■■□□□ 1.84
C19orf48-207ENST00000596655 KRT28Q7Z3Y7 464 aa26.53■■□□□ 1.84
C19orf48-207ENST00000596655 PMFBP1Q8TBY8 1022 aa26.53■■□□□ 1.84
C19orf48-207ENST00000596655 ATP7BP35670 1465 aa26.52■■□□□ 1.84
C19orf48-207ENST00000596655 SPATA31A3Q5VYP0 1347 aa26.5■■□□□ 1.83
C19orf48-207ENST00000596655 CENPJQ9HC77 1338 aaPredicted RBP26.5■■□□□ 1.83
C19orf48-207ENST00000596655 TOPAZ1Q8N9V7 1692 aa26.49■■□□□ 1.83
C19orf48-207ENST00000596655 MARF1Q9Y4F3 1742 aaKnown RBP26.49■■□□□ 1.83
C19orf48-207ENST00000596655 ADAMTS2O95450 1211 aa26.48■■□□□ 1.83
C19orf48-207ENST00000596655 C8orf37Q96NL8 207 aa26.48■■□□□ 1.83
C19orf48-207ENST00000596655 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
C19orf48-207ENST00000596655 TRPM3Q9HCF6 1732 aaPredicted RBP26.48■■□□□ 1.83
C19orf48-207ENST00000596655 ST20-MTHFSA0A0A6YYL1 179 aa26.47■■□□□ 1.83
C19orf48-207ENST00000596655 PSME1Q06323 249 aa26.47■■□□□ 1.83
C19orf48-207ENST00000596655 ZNF772Q68DY9 489 aaPredicted RBP26.47■■□□□ 1.83
C19orf48-207ENST00000596655 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
C19orf48-207ENST00000596655 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
C19orf48-207ENST00000596655 AFF2P51816 1311 aa26.46■■□□□ 1.83
C19orf48-207ENST00000596655 NUDT16Q96DE0 195 aaKnown RBP26.46■■□□□ 1.83
C19orf48-207ENST00000596655 SBNO1A3KN83 1393 aa26.45■■□□□ 1.83
C19orf48-207ENST00000596655 ABCA3Q99758 1704 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms