RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 SIRT1Q96EB6 747 aa32.57■■■□□ 2.8
GTF2F1-204ENST00000594965 STAC3Q96MF2 364 aa32.57■■■□□ 2.8
GTF2F1-204ENST00000594965 SHPRHQ149N8 1683 aa32.56■■■□□ 2.8
GTF2F1-204ENST00000594965 DLC1Q96QB1 1528 aa32.53■■■□□ 2.8
GTF2F1-204ENST00000594965 FMN2Q9NZ56 1722 aa32.52■■■□□ 2.8
GTF2F1-204ENST00000594965 DDX17Q92841 729 aaKnown RBP32.52■■■□□ 2.8
GTF2F1-204ENST00000594965 ORAI2Q96SN7 254 aa32.51■■■□□ 2.79
GTF2F1-204ENST00000594965 PHF23Q9BUL5 403 aaPredicted RBP32.49■■■□□ 2.79
GTF2F1-204ENST00000594965 TRIM26Q12899 539 aaPredicted RBP32.47■■■□□ 2.79
GTF2F1-204ENST00000594965 RGPD8O14715 1765 aaPredicted RBP32.46■■■□□ 2.79
GTF2F1-204ENST00000594965 KIAA1210Q9ULL0 1709 aa32.46■■■□□ 2.79
GTF2F1-204ENST00000594965 PRAM1Q96QH2 718 aa32.45■■■□□ 2.79
GTF2F1-204ENST00000594965 RGS17Q9UGC6 210 aaPredicted RBP32.45■■■□□ 2.79
GTF2F1-204ENST00000594965 LRP6O75581 1613 aa32.44■■■□□ 2.78
GTF2F1-204ENST00000594965 SIN3AQ96ST3 1273 aa32.43■■■□□ 2.78
GTF2F1-204ENST00000594965 TRAK1Q9UPV9 953 aa32.42■■■□□ 2.78
GTF2F1-204ENST00000594965 SPATA31A6Q5VVP1 1343 aa32.42■■■□□ 2.78
GTF2F1-204ENST00000594965 ARHGEF28Q8N1W1 1705 aaKnown RBP32.42■■■□□ 2.78
GTF2F1-204ENST00000594965 SAFB2Q14151 953 aaKnown RBP eCLIP32.4■■■□□ 2.78
GTF2F1-204ENST00000594965 NUTM2FA1L443 756 aa32.39■■■□□ 2.78
GTF2F1-204ENST00000594965 LRRC59Q96AG4 307 aaKnown RBP32.39■■■□□ 2.78
GTF2F1-204ENST00000594965 SOS2Q07890 1332 aaPredicted RBP32.39■■■□□ 2.78
GTF2F1-204ENST00000594965 ADGRB2O60241 1585 aa32.38■■■□□ 2.77
GTF2F1-204ENST00000594965 ESCO1Q5FWF5 840 aa32.38■■■□□ 2.77
GTF2F1-204ENST00000594965 POGKQ9P215 609 aa32.37■■■□□ 2.77
GTF2F1-204ENST00000594965 PNPLA6Q8IY17 1366 aa32.34■■■□□ 2.77
GTF2F1-204ENST00000594965 USP32Q8NFA0 1604 aa32.34■■■□□ 2.77
GTF2F1-204ENST00000594965 L3MBTL2Q969R5 705 aa32.34■■■□□ 2.77
GTF2F1-204ENST00000594965 KIF1AQ12756 1690 aa32.34■■■□□ 2.77
GTF2F1-204ENST00000594965 PXDNQ92626 1479 aa32.32■■■□□ 2.76
GTF2F1-204ENST00000594965 SOCS7O14512 581 aa32.3■■■□□ 2.76
GTF2F1-204ENST00000594965 NEUROD1Q13562 356 aa32.3■■■□□ 2.76
GTF2F1-204ENST00000594965 NBPF1Q3BBV0 1214 aa32.29■■■□□ 2.76
GTF2F1-204ENST00000594965 NPHP3Q7Z494 1330 aa32.28■■■□□ 2.76
GTF2F1-204ENST00000594965 FOXO3O43524 673 aa32.28■■■□□ 2.76
GTF2F1-204ENST00000594965 COL22A1Q8NFW1 1626 aaPredicted RBP32.26■■■□□ 2.76
GTF2F1-204ENST00000594965 NUTM2BA6NNL0 878 aaPredicted RBP32.26■■■□□ 2.75
GTF2F1-204ENST00000594965 NUTM2EB1AL46 878 aaPredicted RBP32.26■■■□□ 2.75
GTF2F1-204ENST00000594965 POTEAQ6S8J7 498 aa32.26■■■□□ 2.75
GTF2F1-204ENST00000594965 NUTM2AQ8IVF1 878 aaPredicted RBP32.26■■■□□ 2.75
GTF2F1-204ENST00000594965 HIRIP3Q9BW71 556 aaPredicted RBP32.26■■■□□ 2.75
GTF2F1-204ENST00000594965 MINK1Q8N4C8 1332 aaPredicted RBP32.26■■■□□ 2.75
GTF2F1-204ENST00000594965 XPCQ01831 940 aaPredicted RBP32.24■■■□□ 2.75
GTF2F1-204ENST00000594965 TRPM1Q7Z4N2 1603 aa32.24■■■□□ 2.75
GTF2F1-204ENST00000594965 MEX3CQ5U5Q3 659 aaKnown RBP32.22■■■□□ 2.75
GTF2F1-204ENST00000594965 ANKARQ7Z5J8 1434 aa32.22■■■□□ 2.75
GTF2F1-204ENST00000594965 PHF8Q9UPP1 1060 aa32.2■■■□□ 2.75
GTF2F1-204ENST00000594965 TULP4Q9NRJ4 1543 aa32.2■■■□□ 2.74
GTF2F1-204ENST00000594965 WASLO00401 505 aaPredicted RBP32.19■■■□□ 2.74
GTF2F1-204ENST00000594965 PRR36Q9H6K5 1346 aa32.18■■■□□ 2.74
GTF2F1-204ENST00000594965 EIF3AQ14152 1382 aaKnown RBP32.13■■■□□ 2.73
GTF2F1-204ENST00000594965 KRT28Q7Z3Y7 464 aa32.13■■■□□ 2.73
GTF2F1-204ENST00000594965 ITSN1Q15811 1721 aa32.12■■■□□ 2.73
GTF2F1-204ENST00000594965 MARF1Q9Y4F3 1742 aaKnown RBP32.12■■■□□ 2.73
GTF2F1-204ENST00000594965 SPATA31A3Q5VYP0 1347 aa32.11■■■□□ 2.73
GTF2F1-204ENST00000594965 PMFBP1Q8TBY8 1022 aa32.11■■■□□ 2.73
GTF2F1-204ENST00000594965 QRICH2Q9H0J4 1663 aa32.1■■■□□ 2.73
GTF2F1-204ENST00000594965 ATP7BP35670 1465 aa32.1■■■□□ 2.73
GTF2F1-204ENST00000594965 TRPM3Q9HCF6 1732 aaPredicted RBP32.09■■■□□ 2.73
GTF2F1-204ENST00000594965 NBPF8Q3BBV2 869 aa32.09■■■□□ 2.73
GTF2F1-204ENST00000594965 ZNF772Q68DY9 489 aaPredicted RBP32.09■■■□□ 2.73
GTF2F1-204ENST00000594965 AFF2P51816 1311 aa32.07■■■□□ 2.72
GTF2F1-204ENST00000594965 ADAMTS2O95450 1211 aa32.07■■■□□ 2.72
GTF2F1-204ENST00000594965 C8orf37Q96NL8 207 aa32.07■■■□□ 2.72
GTF2F1-204ENST00000594965 TOPAZ1Q8N9V7 1692 aa32.07■■■□□ 2.72
GTF2F1-204ENST00000594965 CDK19Q9BWU1 502 aa32.05■■■□□ 2.72
GTF2F1-204ENST00000594965 TNS3Q68CZ2 1445 aa32.05■■■□□ 2.72
GTF2F1-204ENST00000594965 SBNO1A3KN83 1393 aa32.05■■■□□ 2.72
GTF2F1-204ENST00000594965 CENPJQ9HC77 1338 aaPredicted RBP32.04■■■□□ 2.72
GTF2F1-204ENST00000594965 PSME1Q06323 249 aa32.04■■■□□ 2.72
GTF2F1-204ENST00000594965 NUDT16Q96DE0 195 aaKnown RBP32.03■■■□□ 2.72
GTF2F1-204ENST00000594965 ROCK2O75116 1388 aaKnown RBP32.02■■■□□ 2.72
GTF2F1-204ENST00000594965 ABCA3Q99758 1704 aa32.01■■■□□ 2.72
GTF2F1-204ENST00000594965 TONSLQ96HA7 1378 aa32.01■■■□□ 2.71
GTF2F1-204ENST00000594965 ALS2Q96Q42 1657 aa32.01■■■□□ 2.71
GTF2F1-204ENST00000594965 GPRASP1Q5JY77 1395 aa31.98■■■□□ 2.71
GTF2F1-204ENST00000594965 NGLY1Q96IV0 654 aa31.98■■■□□ 2.71
GTF2F1-204ENST00000594965 NGDNQ8NEJ9 315 aaKnown RBP31.94■■■□□ 2.7
GTF2F1-204ENST00000594965 FNBP4Q8N3X1 1017 aaPredicted RBP31.93■■■□□ 2.7
GTF2F1-204ENST00000594965 ARHGEF10O15013 1369 aa31.93■■■□□ 2.7
GTF2F1-204ENST00000594965 CCDC61Q9Y6R9 512 aa31.92■■■□□ 2.7
GTF2F1-204ENST00000594965 RALGAPBQ86X10 1494 aa31.91■■■□□ 2.7
GTF2F1-204ENST00000594965 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
GTF2F1-204ENST00000594965 QTRT2Q9H974 415 aaKnown RBP31.91■■■□□ 2.7
GTF2F1-204ENST00000594965 CRYBG1Q9Y4K1 1723 aa31.91■■■□□ 2.7
GTF2F1-204ENST00000594965 RXRBP28702 533 aa31.9■■■□□ 2.7
GTF2F1-204ENST00000594965 LMOD2Q6P5Q4 547 aa31.9■■■□□ 2.7
GTF2F1-204ENST00000594965 CABP2Q9NPB3 220 aa31.9■■■□□ 2.7
GTF2F1-204ENST00000594965 POLR3AO14802 1390 aaPredicted RBP31.9■■■□□ 2.7
GTF2F1-204ENST00000594965 PCGF6Q9BYE7 350 aa31.89■■■□□ 2.7
GTF2F1-204ENST00000594965 USP21Q9UK80 565 aa31.89■■■□□ 2.7
GTF2F1-204ENST00000594965 PLEKHG3A1L390 1219 aa31.88■■■□□ 2.69
GTF2F1-204ENST00000594965 SRPK2P78362 688 aaKnown RBP31.88■■■□□ 2.69
GTF2F1-204ENST00000594965 BCL9LQ86UU0 1499 aa31.87■■■□□ 2.69
GTF2F1-204ENST00000594965 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.86■■■□□ 2.69
GTF2F1-204ENST00000594965 ACEP12821 1306 aa31.86■■■□□ 2.69
GTF2F1-204ENST00000594965 CDK12Q9NYV4 1490 aaPredicted RBP31.85■■■□□ 2.69
GTF2F1-204ENST00000594965 PLEKHG5O94827 1062 aa31.85■■■□□ 2.69
GTF2F1-204ENST00000594965 PPIP5K1Q6PFW1 1433 aa31.84■■■□□ 2.69
GTF2F1-204ENST00000594965 SLIT2O94813 1529 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms