RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 PRAM1Q96QH2 718 aa31.57■■■□□ 2.64
HOMER3-206ENST00000594439 C1orf167Q5SNV9 1468 aa31.55■■■□□ 2.64
HOMER3-206ENST00000594439 NBPF1Q3BBV0 1214 aa31.55■■■□□ 2.64
HOMER3-206ENST00000594439 BRINP3Q76B58 766 aa31.55■■■□□ 2.64
HOMER3-206ENST00000594439 ARHGEF28Q8N1W1 1705 aaKnown RBP31.55■■■□□ 2.64
HOMER3-206ENST00000594439 PHLPP1O60346 1717 aa31.53■■■□□ 2.64
HOMER3-206ENST00000594439 TONSLQ96HA7 1378 aa31.53■■■□□ 2.64
HOMER3-206ENST00000594439 TRPM1Q7Z4N2 1603 aa31.53■■■□□ 2.64
HOMER3-206ENST00000594439 POGKQ9P215 609 aa31.52■■■□□ 2.64
HOMER3-206ENST00000594439 AHDC1Q5TGY3 1603 aaPredicted RBP31.51■■■□□ 2.63
HOMER3-206ENST00000594439 SAFB2Q14151 953 aaKnown RBP eCLIP31.51■■■□□ 2.63
HOMER3-206ENST00000594439 FMN2Q9NZ56 1722 aa31.5■■■□□ 2.63
HOMER3-206ENST00000594439 COL16A1Q07092 1604 aaPredicted RBP31.47■■■□□ 2.63
HOMER3-206ENST00000594439 ADGRB2O60241 1585 aa31.47■■■□□ 2.63
HOMER3-206ENST00000594439 NHSL1Q5SYE7 1610 aa31.46■■■□□ 2.63
HOMER3-206ENST00000594439 NBPF8Q3BBV2 869 aa31.46■■■□□ 2.63
HOMER3-206ENST00000594439 ORAI2Q96SN7 254 aa31.44■■■□□ 2.62
HOMER3-206ENST00000594439 CLSPNQ9HAW4 1339 aa31.44■■■□□ 2.62
HOMER3-206ENST00000594439 NUTM2FA1L443 756 aa31.4■■■□□ 2.62
HOMER3-206ENST00000594439 MINK1Q8N4C8 1332 aaPredicted RBP31.4■■■□□ 2.62
HOMER3-206ENST00000594439 RGPD8O14715 1765 aaPredicted RBP31.38■■■□□ 2.61
HOMER3-206ENST00000594439 HIRIP3Q9BW71 556 aaPredicted RBP31.37■■■□□ 2.61
HOMER3-206ENST00000594439 ROCK2O75116 1388 aaKnown RBP31.37■■■□□ 2.61
HOMER3-206ENST00000594439 ESCO1Q5FWF5 840 aa31.36■■■□□ 2.61
HOMER3-206ENST00000594439 DDX17Q92841 729 aaKnown RBP31.36■■■□□ 2.61
HOMER3-206ENST00000594439 GPRASP1Q5JY77 1395 aa31.35■■■□□ 2.61
HOMER3-206ENST00000594439 USP32Q8NFA0 1604 aa31.34■■■□□ 2.61
HOMER3-206ENST00000594439 MED1Q15648 1581 aaPredicted RBP31.34■■■□□ 2.61
HOMER3-206ENST00000594439 RALGAPBQ86X10 1494 aa31.33■■■□□ 2.61
HOMER3-206ENST00000594439 JCADQ9P266 1359 aa31.33■■■□□ 2.61
HOMER3-206ENST00000594439 ANKARQ7Z5J8 1434 aa31.32■■■□□ 2.6
HOMER3-206ENST00000594439 WASLO00401 505 aaPredicted RBP31.31■■■□□ 2.6
HOMER3-206ENST00000594439 CCER1Q8TC90 406 aaPredicted RBP31.31■■■□□ 2.6
HOMER3-206ENST00000594439 KIF1AQ12756 1690 aa31.3■■■□□ 2.6
HOMER3-206ENST00000594439 CENPJQ9HC77 1338 aaPredicted RBP31.29■■■□□ 2.6
HOMER3-206ENST00000594439 SHPRHQ149N8 1683 aa31.29■■■□□ 2.6
HOMER3-206ENST00000594439 TULP4Q9NRJ4 1543 aa31.29■■■□□ 2.6
HOMER3-206ENST00000594439 QRICH2Q9H0J4 1663 aa31.29■■■□□ 2.6
HOMER3-206ENST00000594439 SOS2Q07890 1332 aaPredicted RBP31.27■■■□□ 2.6
HOMER3-206ENST00000594439 EIF3AQ14152 1382 aaKnown RBP31.27■■■□□ 2.6
HOMER3-206ENST00000594439 TIMELESSQ9UNS1 1208 aa31.26■■■□□ 2.59
HOMER3-206ENST00000594439 PRR36Q9H6K5 1346 aa31.25■■■□□ 2.59
HOMER3-206ENST00000594439 NPHP3Q7Z494 1330 aa31.24■■■□□ 2.59
HOMER3-206ENST00000594439 LRRC59Q96AG4 307 aaKnown RBP31.24■■■□□ 2.59
HOMER3-206ENST00000594439 DISP3Q9P2K9 1392 aa31.24■■■□□ 2.59
HOMER3-206ENST00000594439 PXDNQ92626 1479 aa31.23■■■□□ 2.59
HOMER3-206ENST00000594439 FOXO3O43524 673 aa31.23■■■□□ 2.59
HOMER3-206ENST00000594439 PHF8Q9UPP1 1060 aa31.23■■■□□ 2.59
HOMER3-206ENST00000594439 CARD11Q9BXL7 1154 aa31.22■■■□□ 2.59
HOMER3-206ENST00000594439 CDK19Q9BWU1 502 aa31.21■■■□□ 2.59
HOMER3-206ENST00000594439 ATP7BP35670 1465 aa31.2■■■□□ 2.58
HOMER3-206ENST00000594439 SPATA31A6Q5VVP1 1343 aa31.18■■■□□ 2.58
HOMER3-206ENST00000594439 ITSN1Q15811 1721 aa31.18■■■□□ 2.58
HOMER3-206ENST00000594439 PNPLA6Q8IY17 1366 aa31.17■■■□□ 2.58
HOMER3-206ENST00000594439 XPCQ01831 940 aaPredicted RBP31.17■■■□□ 2.58
HOMER3-206ENST00000594439 NUDT16Q96DE0 195 aaKnown RBP31.16■■■□□ 2.58
HOMER3-206ENST00000594439 PMFBP1Q8TBY8 1022 aa31.15■■■□□ 2.58
HOMER3-206ENST00000594439 LRP6O75581 1613 aa31.14■■■□□ 2.58
HOMER3-206ENST00000594439 TOPAZ1Q8N9V7 1692 aa31.14■■■□□ 2.58
HOMER3-206ENST00000594439 KRT28Q7Z3Y7 464 aa31.12■■■□□ 2.57
HOMER3-206ENST00000594439 COL22A1Q8NFW1 1626 aaPredicted RBP31.09■■■□□ 2.57
HOMER3-206ENST00000594439 SBNO2Q9Y2G9 1366 aa31.08■■■□□ 2.57
HOMER3-206ENST00000594439 SRPK2P78362 688 aaKnown RBP31.08■■■□□ 2.57
HOMER3-206ENST00000594439 CABP2Q9NPB3 220 aa31.07■■■□□ 2.56
HOMER3-206ENST00000594439 CCDC61Q9Y6R9 512 aa31.07■■■□□ 2.56
HOMER3-206ENST00000594439 SPATA31A3Q5VYP0 1347 aa31.06■■■□□ 2.56
HOMER3-206ENST00000594439 EVC2Q86UK5 1308 aa31.06■■■□□ 2.56
HOMER3-206ENST00000594439 PSME1Q06323 249 aa31.06■■■□□ 2.56
HOMER3-206ENST00000594439 PHF23Q9BUL5 403 aaPredicted RBP31.06■■■□□ 2.56
HOMER3-206ENST00000594439 TRPM3Q9HCF6 1732 aaPredicted RBP31.05■■■□□ 2.56
HOMER3-206ENST00000594439 NUTM2BA6NNL0 878 aaPredicted RBP31.05■■■□□ 2.56
HOMER3-206ENST00000594439 NUTM2EB1AL46 878 aaPredicted RBP31.05■■■□□ 2.56
HOMER3-206ENST00000594439 NUTM2AQ8IVF1 878 aaPredicted RBP31.05■■■□□ 2.56
HOMER3-206ENST00000594439 SBNO1A3KN83 1393 aa31.05■■■□□ 2.56
HOMER3-206ENST00000594439 NGDNQ8NEJ9 315 aaKnown RBP31.03■■■□□ 2.56
HOMER3-206ENST00000594439 TNS3Q68CZ2 1445 aa31.03■■■□□ 2.56
HOMER3-206ENST00000594439 PLEKHG3A1L390 1219 aa31.02■■■□□ 2.56
HOMER3-206ENST00000594439 POLR3AO14802 1390 aaPredicted RBP31.01■■■□□ 2.55
HOMER3-206ENST00000594439 RGS17Q9UGC6 210 aaPredicted RBP31■■■□□ 2.55
HOMER3-206ENST00000594439 PPIP5K1Q6PFW1 1433 aa30.99■■■□□ 2.55
HOMER3-206ENST00000594439 MEX3CQ5U5Q3 659 aaKnown RBP30.98■■■□□ 2.55
HOMER3-206ENST00000594439 ACEP12821 1306 aa30.98■■■□□ 2.55
HOMER3-206ENST00000594439 ST20-MTHFSA0A0A6YYL1 179 aa30.97■■■□□ 2.55
HOMER3-206ENST00000594439 ALS2Q96Q42 1657 aa30.97■■■□□ 2.55
HOMER3-206ENST00000594439 USP47Q96K76 1375 aa30.96■■■□□ 2.55
HOMER3-206ENST00000594439 TESK2Q96S53 571 aa30.95■■■□□ 2.55
HOMER3-206ENST00000594439 ARHGEF10O15013 1369 aa30.93■■■□□ 2.54
HOMER3-206ENST00000594439 CABP1Q9NZU7 370 aa30.93■■■□□ 2.54
HOMER3-206ENST00000594439 ILDR2Q71H61 639 aa30.92■■■□□ 2.54
HOMER3-206ENST00000594439 ATAD2Q6PL18 1390 aa30.91■■■□□ 2.54
HOMER3-206ENST00000594439 ADAMTS2O95450 1211 aa30.9■■■□□ 2.54
HOMER3-206ENST00000594439 LMOD2Q6P5Q4 547 aa30.9■■■□□ 2.54
HOMER3-206ENST00000594439 MARF1Q9Y4F3 1742 aaKnown RBP30.9■■■□□ 2.54
HOMER3-206ENST00000594439 ABCA3Q99758 1704 aa30.89■■■□□ 2.54
HOMER3-206ENST00000594439 PAK3O75914 559 aaPredicted RBP30.86■■■□□ 2.53
HOMER3-206ENST00000594439 CABLES1Q8TDN4 633 aa30.85■■■□□ 2.53
HOMER3-206ENST00000594439 C8orf37Q96NL8 207 aa30.85■■■□□ 2.53
HOMER3-206ENST00000594439 AKAP12Q02952 1782 aa30.84■■■□□ 2.53
HOMER3-206ENST00000594439 POTEAQ6S8J7 498 aa30.84■■■□□ 2.53
HOMER3-206ENST00000594439 PUS7Q96PZ0 661 aaKnown RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms