RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 RXRBP28702 533 aa18.45■□□□□ 0.54
LDLRAD4-219ENST00000593236 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
LDLRAD4-219ENST00000593236 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
LDLRAD4-219ENST00000593236 VGFO15240 615 aaPredicted RBP18.44■□□□□ 0.54
LDLRAD4-219ENST00000593236 AFF2P51816 1311 aa18.43■□□□□ 0.54
LDLRAD4-219ENST00000593236 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
LDLRAD4-219ENST00000593236 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
LDLRAD4-219ENST00000593236 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
LDLRAD4-219ENST00000593236 PNPLA6Q8IY17 1366 aa18.4■□□□□ 0.54
LDLRAD4-219ENST00000593236 C1orf167Q5SNV9 1468 aa18.39■□□□□ 0.54
LDLRAD4-219ENST00000593236 C8orf37Q96NL8 207 aa18.38■□□□□ 0.53
LDLRAD4-219ENST00000593236 ROBO2Q9HCK4 1378 aa18.38■□□□□ 0.53
LDLRAD4-219ENST00000593236 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
LDLRAD4-219ENST00000593236 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
LDLRAD4-219ENST00000593236 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
LDLRAD4-219ENST00000593236 PTCH1Q13635 1447 aa18.36■□□□□ 0.53
LDLRAD4-219ENST00000593236 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
LDLRAD4-219ENST00000593236 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
LDLRAD4-219ENST00000593236 LAMC1P11047 1609 aa18.34■□□□□ 0.53
LDLRAD4-219ENST00000593236 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
LDLRAD4-219ENST00000593236 CFAP70Q5T0N1 1121 aa18.34■□□□□ 0.53
LDLRAD4-219ENST00000593236 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
LDLRAD4-219ENST00000593236 ADAMTS2O95450 1211 aa18.33■□□□□ 0.52
LDLRAD4-219ENST00000593236 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.52
LDLRAD4-219ENST00000593236 NBPF8Q3BBV2 869 aa18.33■□□□□ 0.52
LDLRAD4-219ENST00000593236 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
LDLRAD4-219ENST00000593236 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
LDLRAD4-219ENST00000593236 RGS12O14924 1447 aa18.31■□□□□ 0.52
LDLRAD4-219ENST00000593236 TMEM132EQ6IEE7 984 aa18.29■□□□□ 0.52
LDLRAD4-219ENST00000593236 TRPM1Q7Z4N2 1603 aa18.27■□□□□ 0.52
LDLRAD4-219ENST00000593236 NBPF1Q3BBV0 1214 aa18.27■□□□□ 0.52
LDLRAD4-219ENST00000593236 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
LDLRAD4-219ENST00000593236 USP21Q9UK80 565 aa18.26■□□□□ 0.51
LDLRAD4-219ENST00000593236 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
LDLRAD4-219ENST00000593236 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
LDLRAD4-219ENST00000593236 ESCO1Q5FWF5 840 aa18.25■□□□□ 0.51
LDLRAD4-219ENST00000593236 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
LDLRAD4-219ENST00000593236 STK26Q9P289 416 aa18.25■□□□□ 0.51
LDLRAD4-219ENST00000593236 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
LDLRAD4-219ENST00000593236 YTHDC2Q9H6S0 1430 aaKnown RBP18.23■□□□□ 0.51
LDLRAD4-219ENST00000593236 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
LDLRAD4-219ENST00000593236 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
LDLRAD4-219ENST00000593236 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
LDLRAD4-219ENST00000593236 LRPPRCP42704 1394 aaKnown RBP18.22■□□□□ 0.51
LDLRAD4-219ENST00000593236 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
LDLRAD4-219ENST00000593236 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
LDLRAD4-219ENST00000593236 FOXO3O43524 673 aa18.21■□□□□ 0.51
LDLRAD4-219ENST00000593236 PXDNQ92626 1479 aa18.2■□□□□ 0.5
LDLRAD4-219ENST00000593236 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
LDLRAD4-219ENST00000593236 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
LDLRAD4-219ENST00000593236 TECPR2O15040 1411 aa18.19■□□□□ 0.5
LDLRAD4-219ENST00000593236 ATRNO75882 1429 aa18.19■□□□□ 0.5
LDLRAD4-219ENST00000593236 TRAK1Q9UPV9 953 aa18.19■□□□□ 0.5
LDLRAD4-219ENST00000593236 GPRASP1Q5JY77 1395 aa18.18■□□□□ 0.5
LDLRAD4-219ENST00000593236 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
LDLRAD4-219ENST00000593236 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
LDLRAD4-219ENST00000593236 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
LDLRAD4-219ENST00000593236 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
LDLRAD4-219ENST00000593236 BCL9LQ86UU0 1499 aa18.17■□□□□ 0.5
LDLRAD4-219ENST00000593236 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
LDLRAD4-219ENST00000593236 MARF1Q9Y4F3 1742 aaKnown RBP18.15■□□□□ 0.5
LDLRAD4-219ENST00000593236 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
LDLRAD4-219ENST00000593236 ARHGEF28Q8N1W1 1705 aaKnown RBP18.13■□□□□ 0.49
LDLRAD4-219ENST00000593236 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
LDLRAD4-219ENST00000593236 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
LDLRAD4-219ENST00000593236 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
LDLRAD4-219ENST00000593236 SIRT1Q96EB6 747 aa18.12■□□□□ 0.49
LDLRAD4-219ENST00000593236 GJD4Q96KN9 370 aaPredicted RBP18.12■□□□□ 0.49
LDLRAD4-219ENST00000593236 POGKQ9P215 609 aa18.11■□□□□ 0.49
LDLRAD4-219ENST00000593236 SPATA31A3Q5VYP0 1347 aa18.11■□□□□ 0.49
LDLRAD4-219ENST00000593236 USP47Q96K76 1375 aa18.1■□□□□ 0.49
LDLRAD4-219ENST00000593236 KRT28Q7Z3Y7 464 aa18.1■□□□□ 0.49
LDLRAD4-219ENST00000593236 EIF3AQ14152 1382 aaKnown RBP18.09■□□□□ 0.49
LDLRAD4-219ENST00000593236 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
LDLRAD4-219ENST00000593236 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.48
LDLRAD4-219ENST00000593236 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
LDLRAD4-219ENST00000593236 KIF1AQ12756 1690 aa18.07■□□□□ 0.48
LDLRAD4-219ENST00000593236 SLIT2O94813 1529 aa18.07■□□□□ 0.48
LDLRAD4-219ENST00000593236 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
LDLRAD4-219ENST00000593236 PHF8Q9UPP1 1060 aa18.06■□□□□ 0.48
LDLRAD4-219ENST00000593236 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
LDLRAD4-219ENST00000593236 CCDC125Q86Z20 511 aa18.05■□□□□ 0.48
LDLRAD4-219ENST00000593236 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
LDLRAD4-219ENST00000593236 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
LDLRAD4-219ENST00000593236 GLI3P10071 1580 aa18.04■□□□□ 0.48
LDLRAD4-219ENST00000593236 CABLES1Q8TDN4 633 aa18.04■□□□□ 0.48
LDLRAD4-219ENST00000593236 ST20-MTHFSA0A0A6YYL1 179 aa18.03■□□□□ 0.48
LDLRAD4-219ENST00000593236 PSME1Q06323 249 aa18.03■□□□□ 0.48
LDLRAD4-219ENST00000593236 USP32Q8NFA0 1604 aa18.02■□□□□ 0.48
LDLRAD4-219ENST00000593236 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
LDLRAD4-219ENST00000593236 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
LDLRAD4-219ENST00000593236 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
LDLRAD4-219ENST00000593236 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
LDLRAD4-219ENST00000593236 PLEKHG5O94827 1062 aa18■□□□□ 0.47
LDLRAD4-219ENST00000593236 SBNO1A3KN83 1393 aa18■□□□□ 0.47
LDLRAD4-219ENST00000593236 BRWD3Q6RI45 1802 aa18■□□□□ 0.47
LDLRAD4-219ENST00000593236 ADGRB2O60241 1585 aa18■□□□□ 0.47
LDLRAD4-219ENST00000593236 EP400Q96L91 3159 aa17.99■□□□□ 0.47
LDLRAD4-219ENST00000593236 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
LDLRAD4-219ENST00000593236 VPS72Q15906 364 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms