RNA–Protein interactions for RNA: ENST00000592202.5

RBM42-206, Transcript of RNA binding motif protein 42, human

TSL 5 BASIC

Gene RBM42, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM42-206	ENST00000592202	DLC1	Q96QB1	1528 aa		33.31	■■■□□ 2.92
RBM42-206	ENST00000592202	CDC42BPG	Q6DT37	1551 aa		33.3	■■■□□ 2.92
RBM42-206	ENST00000592202	POGK	Q9P215	609 aa		33.3	■■■□□ 2.92
RBM42-206	ENST00000592202	DISP3	Q9P2K9	1392 aa		33.3	■■■□□ 2.92
RBM42-206	ENST00000592202	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.29	■■■□□ 2.92
RBM42-206	ENST00000592202	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.27	■■■□□ 2.92
RBM42-206	ENST00000592202	PCGF6	Q9BYE7	350 aa		33.27	■■■□□ 2.92
RBM42-206	ENST00000592202	KIAA1210	Q9ULL0	1709 aa		33.27	■■■□□ 2.92
RBM42-206	ENST00000592202	ORAI2	Q96SN7	254 aa		33.26	■■■□□ 2.92
RBM42-206	ENST00000592202	COL16A1	Q07092	1604 aa	Predicted RBP	33.25	■■■□□ 2.91
RBM42-206	ENST00000592202	NBPF1	Q3BBV0	1214 aa		33.23	■■■□□ 2.91
RBM42-206	ENST00000592202	MED1	Q15648	1581 aa	Predicted RBP	33.22	■■■□□ 2.91
RBM42-206	ENST00000592202	NUTM2F	A1L443	756 aa		33.21	■■■□□ 2.91
RBM42-206	ENST00000592202	NHSL1	Q5SYE7	1610 aa		33.21	■■■□□ 2.91
RBM42-206	ENST00000592202	JCAD	Q9P266	1359 aa		33.2	■■■□□ 2.91
RBM42-206	ENST00000592202	ESCO1	Q5FWF5	840 aa		33.19	■■■□□ 2.9
RBM42-206	ENST00000592202	DDX17	Q92841	729 aa	Known RBP	33.19	■■■□□ 2.9
RBM42-206	ENST00000592202	FMN2	Q9NZ56	1722 aa		33.17	■■■□□ 2.9
RBM42-206	ENST00000592202	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.14	■■■□□ 2.9
RBM42-206	ENST00000592202	LRRC59	Q96AG4	307 aa	Known RBP	33.13	■■■□□ 2.89
RBM42-206	ENST00000592202	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.13	■■■□□ 2.89
RBM42-206	ENST00000592202	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.12	■■■□□ 2.89
RBM42-206	ENST00000592202	TONSL	Q96HA7	1378 aa		33.11	■■■□□ 2.89
RBM42-206	ENST00000592202	ADGRB2	O60241	1585 aa		33.09	■■■□□ 2.89
RBM42-206	ENST00000592202	SOS2	Q07890	1332 aa	Predicted RBP	33.08	■■■□□ 2.89
RBM42-206	ENST00000592202	TRPM1	Q7Z4N2	1603 aa		33.08	■■■□□ 2.89
RBM42-206	ENST00000592202	RGPD8	O14715	1765 aa	Predicted RBP	33.08	■■■□□ 2.89
RBM42-206	ENST00000592202	SHPRH	Q149N8	1683 aa		33.07	■■■□□ 2.88
RBM42-206	ENST00000592202	FOXO3	O43524	673 aa		33.06	■■■□□ 2.88
RBM42-206	ENST00000592202	NBPF8	Q3BBV2	869 aa		33.06	■■■□□ 2.88
RBM42-206	ENST00000592202	SPATA31A6	Q5VVP1	1343 aa		33.06	■■■□□ 2.88
RBM42-206	ENST00000592202	NPHP3	Q7Z494	1330 aa		33.06	■■■□□ 2.88
RBM42-206	ENST00000592202	PHF23	Q9BUL5	403 aa	Predicted RBP	33.06	■■■□□ 2.88
RBM42-206	ENST00000592202	WASL	O00401	505 aa	Predicted RBP	33.05	■■■□□ 2.88
RBM42-206	ENST00000592202	PHF8	Q9UPP1	1060 aa		33.01	■■■□□ 2.88
RBM42-206	ENST00000592202	ANKAR	Q7Z5J8	1434 aa		33.01	■■■□□ 2.87
RBM42-206	ENST00000592202	ROCK2	O75116	1388 aa	Known RBP	33.01	■■■□□ 2.87
RBM42-206	ENST00000592202	KIF1A	Q12756	1690 aa		32.99	■■■□□ 2.87
RBM42-206	ENST00000592202	EIF3A	Q14152	1382 aa	Known RBP	32.98	■■■□□ 2.87
RBM42-206	ENST00000592202	USP32	Q8NFA0	1604 aa		32.98	■■■□□ 2.87
RBM42-206	ENST00000592202	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.97	■■■□□ 2.87
RBM42-206	ENST00000592202	XPC	Q01831	940 aa	Predicted RBP	32.97	■■■□□ 2.87
RBM42-206	ENST00000592202	ILDR2	Q71H61	639 aa		32.97	■■■□□ 2.87
RBM42-206	ENST00000592202	PNPLA6	Q8IY17	1366 aa		32.97	■■■□□ 2.87
RBM42-206	ENST00000592202	PXDN	Q92626	1479 aa		32.97	■■■□□ 2.87
RBM42-206	ENST00000592202	TULP4	Q9NRJ4	1543 aa		32.95	■■■□□ 2.86
RBM42-206	ENST00000592202	PRR36	Q9H6K5	1346 aa		32.95	■■■□□ 2.86
RBM42-206	ENST00000592202	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.94	■■■□□ 2.86
RBM42-206	ENST00000592202	NUTM2E	B1AL46	878 aa	Predicted RBP	32.94	■■■□□ 2.86
RBM42-206	ENST00000592202	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.94	■■■□□ 2.86
RBM42-206	ENST00000592202	CLSPN	Q9HAW4	1339 aa		32.94	■■■□□ 2.86
RBM42-206	ENST00000592202	LRP6	O75581	1613 aa		32.93	■■■□□ 2.86
RBM42-206	ENST00000592202	CDK19	Q9BWU1	502 aa		32.93	■■■□□ 2.86
RBM42-206	ENST00000592202	KRT28	Q7Z3Y7	464 aa		32.93	■■■□□ 2.86
RBM42-206	ENST00000592202	PMFBP1	Q8TBY8	1022 aa		32.93	■■■□□ 2.86
RBM42-206	ENST00000592202	RGS17	Q9UGC6	210 aa	Predicted RBP	32.92	■■■□□ 2.86
RBM42-206	ENST00000592202	GPRASP1	Q5JY77	1395 aa		32.91	■■■□□ 2.86
RBM42-206	ENST00000592202	MEX3C	Q5U5Q3	659 aa	Known RBP	32.9	■■■□□ 2.86
RBM42-206	ENST00000592202	NUDT16	Q96DE0	195 aa	Known RBP	32.89	■■■□□ 2.86
RBM42-206	ENST00000592202	PSME1	Q06323	249 aa		32.88	■■■□□ 2.85
RBM42-206	ENST00000592202	CARD11	Q9BXL7	1154 aa		32.87	■■■□□ 2.85
RBM42-206	ENST00000592202	QRICH2	Q9H0J4	1663 aa		32.87	■■■□□ 2.85
RBM42-206	ENST00000592202	RALGAPB	Q86X10	1494 aa		32.85	■■■□□ 2.85
RBM42-206	ENST00000592202	ATP7B	P35670	1465 aa		32.84	■■■□□ 2.85
RBM42-206	ENST00000592202	SPATA31A3	Q5VYP0	1347 aa		32.84	■■■□□ 2.85
RBM42-206	ENST00000592202	CCER1	Q8TC90	406 aa	Predicted RBP	32.82	■■■□□ 2.84
RBM42-206	ENST00000592202	TIMELESS	Q9UNS1	1208 aa		32.82	■■■□□ 2.84
RBM42-206	ENST00000592202	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.81	■■■□□ 2.84
RBM42-206	ENST00000592202	ITSN1	Q15811	1721 aa		32.81	■■■□□ 2.84
RBM42-206	ENST00000592202	SRPK2	P78362	688 aa	Known RBP	32.8	■■■□□ 2.84
RBM42-206	ENST00000592202	NGDN	Q8NEJ9	315 aa	Known RBP	32.8	■■■□□ 2.84
RBM42-206	ENST00000592202	CCDC61	Q9Y6R9	512 aa		32.8	■■■□□ 2.84
RBM42-206	ENST00000592202	CABP2	Q9NPB3	220 aa		32.78	■■■□□ 2.84
RBM42-206	ENST00000592202	SBNO1	A3KN83	1393 aa		32.78	■■■□□ 2.84
RBM42-206	ENST00000592202	ADAMTS2	O95450	1211 aa		32.76	■■■□□ 2.84
RBM42-206	ENST00000592202	POTEA	Q6S8J7	498 aa		32.76	■■■□□ 2.84
RBM42-206	ENST00000592202	EVC2	Q86UK5	1308 aa		32.76	■■■□□ 2.83
RBM42-206	ENST00000592202	TNS3	Q68CZ2	1445 aa		32.75	■■■□□ 2.83
RBM42-206	ENST00000592202	PLEKHG3	A1L390	1219 aa		32.74	■■■□□ 2.83
RBM42-206	ENST00000592202	TOPAZ1	Q8N9V7	1692 aa		32.73	■■■□□ 2.83
RBM42-206	ENST00000592202	LMOD2	Q6P5Q4	547 aa		32.73	■■■□□ 2.83
RBM42-206	ENST00000592202	C8orf37	Q96NL8	207 aa		32.73	■■■□□ 2.83
RBM42-206	ENST00000592202	ZNF772	Q68DY9	489 aa	Predicted RBP	32.72	■■■□□ 2.83
RBM42-206	ENST00000592202	ACE	P12821	1306 aa		32.71	■■■□□ 2.83
RBM42-206	ENST00000592202	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.7	■■■□□ 2.83
RBM42-206	ENST00000592202	AFF2	P51816	1311 aa		32.69	■■■□□ 2.82
RBM42-206	ENST00000592202	POLR3A	O14802	1390 aa	Predicted RBP	32.69	■■■□□ 2.82
RBM42-206	ENST00000592202	ARHGEF10	O15013	1369 aa		32.69	■■■□□ 2.82
RBM42-206	ENST00000592202	NGLY1	Q96IV0	654 aa		32.68	■■■□□ 2.82
RBM42-206	ENST00000592202	SBNO2	Q9Y2G9	1366 aa		32.67	■■■□□ 2.82
RBM42-206	ENST00000592202	PPIP5K1	Q6PFW1	1433 aa		32.67	■■■□□ 2.82
RBM42-206	ENST00000592202	PAK3	O75914	559 aa	Predicted RBP	32.66	■■■□□ 2.82
RBM42-206	ENST00000592202	CABP1	Q9NZU7	370 aa		32.64	■■■□□ 2.82
RBM42-206	ENST00000592202	CABLES1	Q8TDN4	633 aa		32.63	■■■□□ 2.81
RBM42-206	ENST00000592202	ALS2	Q96Q42	1657 aa		32.63	■■■□□ 2.81
RBM42-206	ENST00000592202	PLEKHG5	O94827	1062 aa		32.62	■■■□□ 2.81
RBM42-206	ENST00000592202	MARF1	Q9Y4F3	1742 aa	Known RBP	32.62	■■■□□ 2.81
RBM42-206	ENST00000592202	HAP1	P54257	671 aa	Predicted RBP	32.61	■■■□□ 2.81
RBM42-206	ENST00000592202	SOCS7	O14512	581 aa		32.61	■■■□□ 2.81
RBM42-206	ENST00000592202	ST20-MTHFS	A0A0A6YYL1	179 aa		32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms