RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
AP3D1-208ENST00000590683 RPRD2Q5VT52 1461 aaKnown RBP13.87□□□□□ -0.19
AP3D1-208ENST00000590683 ABCC5O15440 1437 aa13.87□□□□□ -0.19
AP3D1-208ENST00000590683 TNS1Q9HBL0 1735 aaKnown RBP13.87□□□□□ -0.19
AP3D1-208ENST00000590683 ZNF784Q8NCA9 323 aaPredicted RBP13.86□□□□□ -0.19
AP3D1-208ENST00000590683 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
AP3D1-208ENST00000590683 METP08581 1390 aa13.85□□□□□ -0.19
AP3D1-208ENST00000590683 UTRNP46939 3433 aa13.85□□□□□ -0.19
AP3D1-208ENST00000590683 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
AP3D1-208ENST00000590683 PXDNQ92626 1479 aa13.83□□□□□ -0.2
AP3D1-208ENST00000590683 C1QTNF8P60827 252 aa13.82□□□□□ -0.2
AP3D1-208ENST00000590683 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
AP3D1-208ENST00000590683 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
AP3D1-208ENST00000590683 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
AP3D1-208ENST00000590683 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
AP3D1-208ENST00000590683 E9PCH4 1651 aa13.81□□□□□ -0.2
AP3D1-208ENST00000590683 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
AP3D1-208ENST00000590683 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
AP3D1-208ENST00000590683 NWD2Q9ULI1 1742 aa13.8□□□□□ -0.2
AP3D1-208ENST00000590683 DAPK1P53355 1430 aa13.8□□□□□ -0.2
AP3D1-208ENST00000590683 VPS72Q15906 364 aa13.79□□□□□ -0.2
AP3D1-208ENST00000590683 CCDC9Q9Y3X0 531 aaKnown RBP13.79□□□□□ -0.2
AP3D1-208ENST00000590683 A0A0G2JS52 829 aa13.78□□□□□ -0.2
AP3D1-208ENST00000590683 MYT1Q01538 1121 aa13.78□□□□□ -0.2
AP3D1-208ENST00000590683 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
AP3D1-208ENST00000590683 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
AP3D1-208ENST00000590683 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
AP3D1-208ENST00000590683 CHD4Q14839 1912 aa13.78□□□□□ -0.2
AP3D1-208ENST00000590683 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.21
AP3D1-208ENST00000590683 CEP350Q5VT06 3117 aa13.77□□□□□ -0.21
AP3D1-208ENST00000590683 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
AP3D1-208ENST00000590683 PPP1R1BQ9UD71 204 aaPredicted RBP13.77□□□□□ -0.21
AP3D1-208ENST00000590683 RREB1Q92766 1687 aa13.76□□□□□ -0.21
AP3D1-208ENST00000590683 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
AP3D1-208ENST00000590683 ADGRL2O95490 1459 aa13.75□□□□□ -0.21
AP3D1-208ENST00000590683 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
AP3D1-208ENST00000590683 FOXO3O43524 673 aa13.75□□□□□ -0.21
AP3D1-208ENST00000590683 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
AP3D1-208ENST00000590683 CAMKK2Q96RR4 588 aa13.74□□□□□ -0.21
AP3D1-208ENST00000590683 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
AP3D1-208ENST00000590683 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
AP3D1-208ENST00000590683 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
AP3D1-208ENST00000590683 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
AP3D1-208ENST00000590683 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
AP3D1-208ENST00000590683 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
AP3D1-208ENST00000590683 SPON1Q9HCB6 807 aa13.71□□□□□ -0.21
AP3D1-208ENST00000590683 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
AP3D1-208ENST00000590683 KCNQ2O43526 872 aa13.69□□□□□ -0.22
AP3D1-208ENST00000590683 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
AP3D1-208ENST00000590683 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
AP3D1-208ENST00000590683 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
AP3D1-208ENST00000590683 TRIM37O94972 964 aa13.68□□□□□ -0.22
AP3D1-208ENST00000590683 THSD7AQ9UPZ6 1657 aa13.68□□□□□ -0.22
AP3D1-208ENST00000590683 NRKQ7Z2Y5 1582 aa13.67□□□□□ -0.22
AP3D1-208ENST00000590683 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
AP3D1-208ENST00000590683 MYOM1P52179 1685 aa13.66□□□□□ -0.22
AP3D1-208ENST00000590683 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
AP3D1-208ENST00000590683 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
AP3D1-208ENST00000590683 APBA3O96018 575 aa13.66□□□□□ -0.22
AP3D1-208ENST00000590683 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
AP3D1-208ENST00000590683 LRPPRCP42704 1394 aaKnown RBP13.66□□□□□ -0.22
AP3D1-208ENST00000590683 NEXMIFQ5QGS0 1516 aa13.65□□□□□ -0.22
AP3D1-208ENST00000590683 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
AP3D1-208ENST00000590683 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
AP3D1-208ENST00000590683 CASZ1Q86V15 1759 aa13.63□□□□□ -0.23
AP3D1-208ENST00000590683 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
AP3D1-208ENST00000590683 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
AP3D1-208ENST00000590683 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
AP3D1-208ENST00000590683 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
AP3D1-208ENST00000590683 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
AP3D1-208ENST00000590683 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
AP3D1-208ENST00000590683 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
AP3D1-208ENST00000590683 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
AP3D1-208ENST00000590683 CCDC144AA2RUR9 1427 aa13.6□□□□□ -0.23
AP3D1-208ENST00000590683 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
AP3D1-208ENST00000590683 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
AP3D1-208ENST00000590683 BTG4Q9NY30 223 aa13.6□□□□□ -0.23
AP3D1-208ENST00000590683 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
AP3D1-208ENST00000590683 NAIPQ13075 1403 aa13.59□□□□□ -0.23
AP3D1-208ENST00000590683 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
AP3D1-208ENST00000590683 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
AP3D1-208ENST00000590683 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
AP3D1-208ENST00000590683 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
AP3D1-208ENST00000590683 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
AP3D1-208ENST00000590683 CLTCL1P53675 1640 aa13.57□□□□□ -0.24
AP3D1-208ENST00000590683 KIF1BO60333 1816 aa13.56□□□□□ -0.24
AP3D1-208ENST00000590683 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
AP3D1-208ENST00000590683 VPS8Q8N3P4 1428 aa13.55□□□□□ -0.24
AP3D1-208ENST00000590683 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
AP3D1-208ENST00000590683 ZBTB7AO95365 584 aa13.54□□□□□ -0.24
AP3D1-208ENST00000590683 PTGER2P43116 358 aa13.54□□□□□ -0.24
AP3D1-208ENST00000590683 SYT17Q9BSW7 474 aa13.54□□□□□ -0.24
AP3D1-208ENST00000590683 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
AP3D1-208ENST00000590683 IFT172Q9UG01 1749 aa13.53□□□□□ -0.24
AP3D1-208ENST00000590683 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
AP3D1-208ENST00000590683 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
AP3D1-208ENST00000590683 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
AP3D1-208ENST00000590683 DLC1Q96QB1 1528 aa13.5□□□□□ -0.25
AP3D1-208ENST00000590683 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
AP3D1-208ENST00000590683 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms