RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 GPRASP1Q5JY77 1395 aa18.2■□□□□ 0.5
DDX39A-213ENST00000590315 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
DDX39A-213ENST00000590315 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-213ENST00000590315 CDC42BPGQ6DT37 1551 aa18.18■□□□□ 0.5
DDX39A-213ENST00000590315 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
DDX39A-213ENST00000590315 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
DDX39A-213ENST00000590315 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-213ENST00000590315 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
DDX39A-213ENST00000590315 ATF3P18847 181 aa18.17■□□□□ 0.5
DDX39A-213ENST00000590315 HIRIP3Q9BW71 556 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-213ENST00000590315 USP47Q96K76 1375 aa18.16■□□□□ 0.5
DDX39A-213ENST00000590315 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
DDX39A-213ENST00000590315 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
DDX39A-213ENST00000590315 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
DDX39A-213ENST00000590315 C19orf44Q9H6X5 657 aa18.15■□□□□ 0.5
DDX39A-213ENST00000590315 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-213ENST00000590315 DCCP43146 1447 aa18.13■□□□□ 0.49
DDX39A-213ENST00000590315 ROBO1Q9Y6N7 1651 aa18.12■□□□□ 0.49
DDX39A-213ENST00000590315 TOM1O60784 492 aa18.12■□□□□ 0.49
DDX39A-213ENST00000590315 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
DDX39A-213ENST00000590315 CADPS2Q86UW7 1296 aa18.12■□□□□ 0.49
DDX39A-213ENST00000590315 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
DDX39A-213ENST00000590315 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
DDX39A-213ENST00000590315 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.49
DDX39A-213ENST00000590315 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.48
DDX39A-213ENST00000590315 MST1RQ04912 1400 aa18.07■□□□□ 0.48
DDX39A-213ENST00000590315 KIF1AQ12756 1690 aa18.07■□□□□ 0.48
DDX39A-213ENST00000590315 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.48
DDX39A-213ENST00000590315 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
DDX39A-213ENST00000590315 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
DDX39A-213ENST00000590315 TOPAZ1Q8N9V7 1692 aa18.06■□□□□ 0.48
DDX39A-213ENST00000590315 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
DDX39A-213ENST00000590315 WASLO00401 505 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-213ENST00000590315 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
DDX39A-213ENST00000590315 HSPA5P11021 654 aaKnown RBP18.04■□□□□ 0.48
DDX39A-213ENST00000590315 SLAIN2Q9P270 581 aa18.04■□□□□ 0.48
DDX39A-213ENST00000590315 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
DDX39A-213ENST00000590315 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.47
DDX39A-213ENST00000590315 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
DDX39A-213ENST00000590315 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
DDX39A-213ENST00000590315 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
DDX39A-213ENST00000590315 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
DDX39A-213ENST00000590315 ATP7BP35670 1465 aa18.01■□□□□ 0.47
DDX39A-213ENST00000590315 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
DDX39A-213ENST00000590315 TMF1P82094 1093 aa17.99■□□□□ 0.47
DDX39A-213ENST00000590315 FBXO41Q8TF61 875 aa17.99■□□□□ 0.47
DDX39A-213ENST00000590315 NUDT16Q96DE0 195 aaKnown RBP17.98■□□□□ 0.47
DDX39A-213ENST00000590315 ORAI2Q96SN7 254 aa17.98■□□□□ 0.47
DDX39A-213ENST00000590315 AKAP12Q02952 1782 aa17.97■□□□□ 0.47
DDX39A-213ENST00000590315 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
DDX39A-213ENST00000590315 PRR36Q9H6K5 1346 aa17.97■□□□□ 0.47
DDX39A-213ENST00000590315 SLC24A1O60721 1099 aa17.96■□□□□ 0.47
DDX39A-213ENST00000590315 BRINP3Q76B58 766 aa17.96■□□□□ 0.47
DDX39A-213ENST00000590315 TESK2Q96S53 571 aa17.96■□□□□ 0.47
DDX39A-213ENST00000590315 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
DDX39A-213ENST00000590315 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
DDX39A-213ENST00000590315 MYOM1P52179 1685 aa17.95■□□□□ 0.46
DDX39A-213ENST00000590315 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
DDX39A-213ENST00000590315 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
DDX39A-213ENST00000590315 PHF8Q9UPP1 1060 aa17.94■□□□□ 0.46
DDX39A-213ENST00000590315 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
DDX39A-213ENST00000590315 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
DDX39A-213ENST00000590315 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
DDX39A-213ENST00000590315 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
DDX39A-213ENST00000590315 MON2Q7Z3U7 1717 aa17.92■□□□□ 0.46
DDX39A-213ENST00000590315 COL16A1Q07092 1604 aaPredicted RBP17.91■□□□□ 0.46
DDX39A-213ENST00000590315 CCDC61Q9Y6R9 512 aa17.91■□□□□ 0.46
DDX39A-213ENST00000590315 FOXO3O43524 673 aa17.9■□□□□ 0.46
DDX39A-213ENST00000590315 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
DDX39A-213ENST00000590315 NPHP3Q7Z494 1330 aa17.9■□□□□ 0.46
DDX39A-213ENST00000590315 TRPM3Q9HCF6 1732 aaPredicted RBP17.89■□□□□ 0.45
DDX39A-213ENST00000590315 PSME1Q06323 249 aa17.88■□□□□ 0.45
DDX39A-213ENST00000590315 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
DDX39A-213ENST00000590315 HSPA1LP34931 641 aa17.87■□□□□ 0.45
DDX39A-213ENST00000590315 ACEP12821 1306 aa17.87■□□□□ 0.45
DDX39A-213ENST00000590315 PXDNQ92626 1479 aa17.86■□□□□ 0.45
DDX39A-213ENST00000590315 SHPRHQ149N8 1683 aa17.86■□□□□ 0.45
DDX39A-213ENST00000590315 NRKQ7Z2Y5 1582 aa17.85■□□□□ 0.45
DDX39A-213ENST00000590315 KRT28Q7Z3Y7 464 aa17.85■□□□□ 0.45
DDX39A-213ENST00000590315 KIF20BQ96Q89 1820 aa17.85■□□□□ 0.45
DDX39A-213ENST00000590315 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
DDX39A-213ENST00000590315 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-213ENST00000590315 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
DDX39A-213ENST00000590315 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-213ENST00000590315 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-213ENST00000590315 ALS2Q96Q42 1657 aa17.83■□□□□ 0.45
DDX39A-213ENST00000590315 PLEKHG5O94827 1062 aa17.83■□□□□ 0.44
DDX39A-213ENST00000590315 PUS7Q96PZ0 661 aaKnown RBP17.83■□□□□ 0.44
DDX39A-213ENST00000590315 SLC12A5Q9H2X9 1139 aa17.83■□□□□ 0.44
DDX39A-213ENST00000590315 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-213ENST00000590315 KTN1Q86UP2 1357 aaKnown RBP17.82■□□□□ 0.44
DDX39A-213ENST00000590315 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
DDX39A-213ENST00000590315 TERF2IPQ9NYB0 399 aa17.82■□□□□ 0.44
DDX39A-213ENST00000590315 KIF7Q2M1P5 1343 aa17.81■□□□□ 0.44
DDX39A-213ENST00000590315 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
DDX39A-213ENST00000590315 ABCA3Q99758 1704 aa17.81■□□□□ 0.44
DDX39A-213ENST00000590315 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
DDX39A-213ENST00000590315 USP6P35125 1406 aa17.8■□□□□ 0.44
DDX39A-213ENST00000590315 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
DDX39A-213ENST00000590315 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms