RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 TRAK1Q9UPV9 953 aa21.05■□□□□ 0.96
CXXC1-213ENST00000590234 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
CXXC1-213ENST00000590234 POGKQ9P215 609 aa21.02■□□□□ 0.96
CXXC1-213ENST00000590234 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
CXXC1-213ENST00000590234 ARHGEF28Q8N1W1 1705 aaKnown RBP21.01■□□□□ 0.95
CXXC1-213ENST00000590234 TRPM1Q7Z4N2 1603 aa21■□□□□ 0.95
CXXC1-213ENST00000590234 SAFB2Q14151 953 aaKnown RBP eCLIP21■□□□□ 0.95
CXXC1-213ENST00000590234 NBPF1Q3BBV0 1214 aa21■□□□□ 0.95
CXXC1-213ENST00000590234 BRINP3Q76B58 766 aa21■□□□□ 0.95
CXXC1-213ENST00000590234 PHLPP1O60346 1717 aa21■□□□□ 0.95
CXXC1-213ENST00000590234 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
CXXC1-213ENST00000590234 AHDC1Q5TGY3 1603 aaPredicted RBP20.98■□□□□ 0.95
CXXC1-213ENST00000590234 FMN2Q9NZ56 1722 aa20.97■□□□□ 0.95
CXXC1-213ENST00000590234 ADGRB2O60241 1585 aa20.97■□□□□ 0.95
CXXC1-213ENST00000590234 COL16A1Q07092 1604 aaPredicted RBP20.95■□□□□ 0.94
CXXC1-213ENST00000590234 NHSL1Q5SYE7 1610 aa20.94■□□□□ 0.94
CXXC1-213ENST00000590234 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
CXXC1-213ENST00000590234 ROCK2O75116 1388 aaKnown RBP20.94■□□□□ 0.94
CXXC1-213ENST00000590234 ORAI2Q96SN7 254 aa20.93■□□□□ 0.94
CXXC1-213ENST00000590234 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
CXXC1-213ENST00000590234 CCER1Q8TC90 406 aaPredicted RBP20.92■□□□□ 0.94
CXXC1-213ENST00000590234 MINK1Q8N4C8 1332 aaPredicted RBP20.92■□□□□ 0.94
CXXC1-213ENST00000590234 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
CXXC1-213ENST00000590234 ESCO1Q5FWF5 840 aa20.9■□□□□ 0.94
CXXC1-213ENST00000590234 RALGAPBQ86X10 1494 aa20.88■□□□□ 0.93
CXXC1-213ENST00000590234 GPRASP1Q5JY77 1395 aa20.88■□□□□ 0.93
CXXC1-213ENST00000590234 EIF3AQ14152 1382 aaKnown RBP20.87■□□□□ 0.93
CXXC1-213ENST00000590234 DDX17Q92841 729 aaKnown RBP20.87■□□□□ 0.93
CXXC1-213ENST00000590234 ANKARQ7Z5J8 1434 aa20.87■□□□□ 0.93
CXXC1-213ENST00000590234 KIF1AQ12756 1690 aa20.86■□□□□ 0.93
CXXC1-213ENST00000590234 JCADQ9P266 1359 aa20.86■□□□□ 0.93
CXXC1-213ENST00000590234 CENPJQ9HC77 1338 aaPredicted RBP20.86■□□□□ 0.93
CXXC1-213ENST00000590234 MED1Q15648 1581 aaPredicted RBP20.86■□□□□ 0.93
CXXC1-213ENST00000590234 WASLO00401 505 aaPredicted RBP20.86■□□□□ 0.93
CXXC1-213ENST00000590234 TULP4Q9NRJ4 1543 aa20.86■□□□□ 0.93
CXXC1-213ENST00000590234 RGPD8O14715 1765 aaPredicted RBP20.86■□□□□ 0.93
CXXC1-213ENST00000590234 QRICH2Q9H0J4 1663 aa20.86■□□□□ 0.93
CXXC1-213ENST00000590234 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
CXXC1-213ENST00000590234 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
CXXC1-213ENST00000590234 SHPRHQ149N8 1683 aa20.83■□□□□ 0.93
CXXC1-213ENST00000590234 NPHP3Q7Z494 1330 aa20.83■□□□□ 0.93
CXXC1-213ENST00000590234 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.93
CXXC1-213ENST00000590234 LRRC59Q96AG4 307 aaKnown RBP20.82■□□□□ 0.92
CXXC1-213ENST00000590234 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
CXXC1-213ENST00000590234 FOXO3O43524 673 aa20.81■□□□□ 0.92
CXXC1-213ENST00000590234 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
CXXC1-213ENST00000590234 PHF8Q9UPP1 1060 aa20.8■□□□□ 0.92
CXXC1-213ENST00000590234 PXDNQ92626 1479 aa20.8■□□□□ 0.92
CXXC1-213ENST00000590234 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
CXXC1-213ENST00000590234 CDK19Q9BWU1 502 aa20.79■□□□□ 0.92
CXXC1-213ENST00000590234 ATP7BP35670 1465 aa20.79■□□□□ 0.92
CXXC1-213ENST00000590234 ITSN1Q15811 1721 aa20.78■□□□□ 0.92
CXXC1-213ENST00000590234 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
CXXC1-213ENST00000590234 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
CXXC1-213ENST00000590234 PMFBP1Q8TBY8 1022 aa20.76■□□□□ 0.91
CXXC1-213ENST00000590234 NUDT16Q96DE0 195 aaKnown RBP20.76■□□□□ 0.91
CXXC1-213ENST00000590234 PNPLA6Q8IY17 1366 aa20.75■□□□□ 0.91
CXXC1-213ENST00000590234 TOPAZ1Q8N9V7 1692 aa20.74■□□□□ 0.91
CXXC1-213ENST00000590234 SRPK2P78362 688 aaKnown RBP20.74■□□□□ 0.91
CXXC1-213ENST00000590234 EVC2Q86UK5 1308 aa20.73■□□□□ 0.91
CXXC1-213ENST00000590234 LRP6O75581 1613 aa20.72■□□□□ 0.91
CXXC1-213ENST00000590234 KRT28Q7Z3Y7 464 aa20.72■□□□□ 0.91
CXXC1-213ENST00000590234 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
CXXC1-213ENST00000590234 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
CXXC1-213ENST00000590234 PSME1Q06323 249 aa20.71■□□□□ 0.91
CXXC1-213ENST00000590234 CABP2Q9NPB3 220 aa20.71■□□□□ 0.91
CXXC1-213ENST00000590234 CCDC61Q9Y6R9 512 aa20.7■□□□□ 0.9
CXXC1-213ENST00000590234 COL22A1Q8NFW1 1626 aaPredicted RBP20.7■□□□□ 0.9
CXXC1-213ENST00000590234 NUTM2BA6NNL0 878 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-213ENST00000590234 NUTM2EB1AL46 878 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-213ENST00000590234 NUTM2AQ8IVF1 878 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-213ENST00000590234 NGDNQ8NEJ9 315 aaKnown RBP20.69■□□□□ 0.9
CXXC1-213ENST00000590234 SPATA31A3Q5VYP0 1347 aa20.68■□□□□ 0.9
CXXC1-213ENST00000590234 TNS3Q68CZ2 1445 aa20.68■□□□□ 0.9
CXXC1-213ENST00000590234 MEX3CQ5U5Q3 659 aaKnown RBP20.67■□□□□ 0.9
CXXC1-213ENST00000590234 SBNO1A3KN83 1393 aa20.67■□□□□ 0.9
CXXC1-213ENST00000590234 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
CXXC1-213ENST00000590234 USP47Q96K76 1375 aa20.66■□□□□ 0.9
CXXC1-213ENST00000590234 TRPM3Q9HCF6 1732 aaPredicted RBP20.66■□□□□ 0.9
CXXC1-213ENST00000590234 POLR3AO14802 1390 aaPredicted RBP20.65■□□□□ 0.9
CXXC1-213ENST00000590234 PLEKHG3A1L390 1219 aa20.65■□□□□ 0.9
CXXC1-213ENST00000590234 ACEP12821 1306 aa20.64■□□□□ 0.89
CXXC1-213ENST00000590234 ST20-MTHFSA0A0A6YYL1 179 aa20.64■□□□□ 0.89
CXXC1-213ENST00000590234 ARHGEF10O15013 1369 aa20.63■□□□□ 0.89
CXXC1-213ENST00000590234 ATAD2Q6PL18 1390 aa20.62■□□□□ 0.89
CXXC1-213ENST00000590234 ALS2Q96Q42 1657 aa20.61■□□□□ 0.89
CXXC1-213ENST00000590234 LMOD2Q6P5Q4 547 aa20.61■□□□□ 0.89
CXXC1-213ENST00000590234 CABP1Q9NZU7 370 aa20.61■□□□□ 0.89
CXXC1-213ENST00000590234 TESK2Q96S53 571 aa20.6■□□□□ 0.89
CXXC1-213ENST00000590234 SLC24A1O60721 1099 aa20.59■□□□□ 0.89
CXXC1-213ENST00000590234 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
CXXC1-213ENST00000590234 ADAMTS2O95450 1211 aa20.59■□□□□ 0.89
CXXC1-213ENST00000590234 RGS17Q9UGC6 210 aaPredicted RBP20.59■□□□□ 0.89
CXXC1-213ENST00000590234 C8orf37Q96NL8 207 aa20.57■□□□□ 0.88
CXXC1-213ENST00000590234 ABCA3Q99758 1704 aa20.56■□□□□ 0.88
CXXC1-213ENST00000590234 MARF1Q9Y4F3 1742 aaKnown RBP20.56■□□□□ 0.88
CXXC1-213ENST00000590234 HAP1P54257 671 aaPredicted RBP20.55■□□□□ 0.88
CXXC1-213ENST00000590234 USP6P35125 1406 aa20.54■□□□□ 0.88
CXXC1-213ENST00000590234 PLEKHG5O94827 1062 aa20.54■□□□□ 0.88
CXXC1-213ENST00000590234 ILDR2Q71H61 639 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms