RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 PRAM1Q96QH2 718 aa26.84■■□□□ 1.89
MBD1-223ENST00000590215 SLAIN2Q9P270 581 aa26.84■■□□□ 1.89
MBD1-223ENST00000590215 PIP4K2BP78356 416 aa26.83■■□□□ 1.89
MBD1-223ENST00000590215 GPRASP1Q5JY77 1395 aa26.83■■□□□ 1.88
MBD1-223ENST00000590215 POGKQ9P215 609 aa26.79■■□□□ 1.88
MBD1-223ENST00000590215 ROCK2O75116 1388 aaKnown RBP26.79■■□□□ 1.88
MBD1-223ENST00000590215 MST1RQ04912 1400 aa26.79■■□□□ 1.88
MBD1-223ENST00000590215 RALGAPBQ86X10 1494 aa26.79■■□□□ 1.88
MBD1-223ENST00000590215 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
MBD1-223ENST00000590215 ARHGEF28Q8N1W1 1705 aaKnown RBP26.78■■□□□ 1.88
MBD1-223ENST00000590215 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
MBD1-223ENST00000590215 SAFB2Q14151 953 aaKnown RBP eCLIP26.73■■□□□ 1.87
MBD1-223ENST00000590215 ADGRB2O60241 1585 aa26.72■■□□□ 1.87
MBD1-223ENST00000590215 C1orf167Q5SNV9 1468 aa26.72■■□□□ 1.87
MBD1-223ENST00000590215 ROBO1Q9Y6N7 1651 aa26.71■■□□□ 1.87
MBD1-223ENST00000590215 BRINP3Q76B58 766 aa26.69■■□□□ 1.86
MBD1-223ENST00000590215 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
MBD1-223ENST00000590215 CENPJQ9HC77 1338 aaPredicted RBP26.67■■□□□ 1.86
MBD1-223ENST00000590215 HSPA1LP34931 641 aa26.67■■□□□ 1.86
MBD1-223ENST00000590215 MINK1Q8N4C8 1332 aaPredicted RBP26.66■■□□□ 1.86
MBD1-223ENST00000590215 FMN2Q9NZ56 1722 aa26.66■■□□□ 1.86
MBD1-223ENST00000590215 EIF3AQ14152 1382 aaKnown RBP26.65■■□□□ 1.86
MBD1-223ENST00000590215 WASLO00401 505 aaPredicted RBP26.64■■□□□ 1.86
MBD1-223ENST00000590215 HIRIP3Q9BW71 556 aaPredicted RBP26.64■■□□□ 1.86
MBD1-223ENST00000590215 ORAI2Q96SN7 254 aa26.61■■□□□ 1.85
MBD1-223ENST00000590215 ANKARQ7Z5J8 1434 aa26.61■■□□□ 1.85
MBD1-223ENST00000590215 AHDC1Q5TGY3 1603 aaPredicted RBP26.61■■□□□ 1.85
MBD1-223ENST00000590215 NUTM2FA1L443 756 aa26.58■■□□□ 1.85
MBD1-223ENST00000590215 SBNO2Q9Y2G9 1366 aa26.58■■□□□ 1.84
MBD1-223ENST00000590215 QRICH2Q9H0J4 1663 aa26.57■■□□□ 1.84
MBD1-223ENST00000590215 TULP4Q9NRJ4 1543 aa26.57■■□□□ 1.84
MBD1-223ENST00000590215 ESCO1Q5FWF5 840 aa26.57■■□□□ 1.84
MBD1-223ENST00000590215 USP32Q8NFA0 1604 aa26.55■■□□□ 1.84
MBD1-223ENST00000590215 CDK19Q9BWU1 502 aa26.55■■□□□ 1.84
MBD1-223ENST00000590215 PRR36Q9H6K5 1346 aa26.55■■□□□ 1.84
MBD1-223ENST00000590215 NHSL1Q5SYE7 1610 aa26.54■■□□□ 1.84
MBD1-223ENST00000590215 PHLPP1O60346 1717 aa26.52■■□□□ 1.84
MBD1-223ENST00000590215 COL16A1Q07092 1604 aaPredicted RBP26.52■■□□□ 1.84
MBD1-223ENST00000590215 ATP7BP35670 1465 aa26.51■■□□□ 1.83
MBD1-223ENST00000590215 SOS2Q07890 1332 aaPredicted RBP26.5■■□□□ 1.83
MBD1-223ENST00000590215 NUDT16Q96DE0 195 aaKnown RBP26.5■■□□□ 1.83
MBD1-223ENST00000590215 PHF8Q9UPP1 1060 aa26.5■■□□□ 1.83
MBD1-223ENST00000590215 RGPD8O14715 1765 aaPredicted RBP26.5■■□□□ 1.83
MBD1-223ENST00000590215 USP47Q96K76 1375 aa26.49■■□□□ 1.83
MBD1-223ENST00000590215 NPHP3Q7Z494 1330 aa26.49■■□□□ 1.83
MBD1-223ENST00000590215 EVC2Q86UK5 1308 aa26.49■■□□□ 1.83
MBD1-223ENST00000590215 DDX17Q92841 729 aaKnown RBP26.49■■□□□ 1.83
MBD1-223ENST00000590215 KIF1AQ12756 1690 aa26.49■■□□□ 1.83
MBD1-223ENST00000590215 ST20-MTHFSA0A0A6YYL1 179 aa26.48■■□□□ 1.83
MBD1-223ENST00000590215 FOXO3O43524 673 aa26.47■■□□□ 1.83
MBD1-223ENST00000590215 TESK2Q96S53 571 aa26.47■■□□□ 1.83
MBD1-223ENST00000590215 CCDC61Q9Y6R9 512 aa26.46■■□□□ 1.83
MBD1-223ENST00000590215 PXDNQ92626 1479 aa26.44■■□□□ 1.82
MBD1-223ENST00000590215 SLC24A1O60721 1099 aa26.44■■□□□ 1.82
MBD1-223ENST00000590215 SRPK2P78362 688 aaKnown RBP26.44■■□□□ 1.82
MBD1-223ENST00000590215 CABP2Q9NPB3 220 aa26.44■■□□□ 1.82
MBD1-223ENST00000590215 JCADQ9P266 1359 aa26.44■■□□□ 1.82
MBD1-223ENST00000590215 LRRC59Q96AG4 307 aaKnown RBP26.43■■□□□ 1.82
MBD1-223ENST00000590215 PLEKHG3A1L390 1219 aa26.42■■□□□ 1.82
MBD1-223ENST00000590215 TOPAZ1Q8N9V7 1692 aa26.41■■□□□ 1.82
MBD1-223ENST00000590215 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
MBD1-223ENST00000590215 ITSN1Q15811 1721 aa26.41■■□□□ 1.82
MBD1-223ENST00000590215 PUS7Q96PZ0 661 aaKnown RBP26.4■■□□□ 1.82
MBD1-223ENST00000590215 POLR3AO14802 1390 aaPredicted RBP26.38■■□□□ 1.81
MBD1-223ENST00000590215 KRT28Q7Z3Y7 464 aa26.37■■□□□ 1.81
MBD1-223ENST00000590215 ATAD2Q6PL18 1390 aa26.36■■□□□ 1.81
MBD1-223ENST00000590215 XPCQ01831 940 aaPredicted RBP26.36■■□□□ 1.81
MBD1-223ENST00000590215 SHPRHQ149N8 1683 aa26.35■■□□□ 1.81
MBD1-223ENST00000590215 PSME1Q06323 249 aa26.35■■□□□ 1.81
MBD1-223ENST00000590215 PPIP5K1Q6PFW1 1433 aa26.35■■□□□ 1.81
MBD1-223ENST00000590215 NGDNQ8NEJ9 315 aaKnown RBP26.35■■□□□ 1.81
MBD1-223ENST00000590215 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
MBD1-223ENST00000590215 PNPLA6Q8IY17 1366 aa26.34■■□□□ 1.81
MBD1-223ENST00000590215 EIF4G2P78344 907 aaKnown RBP eCLIP26.34■■□□□ 1.81
MBD1-223ENST00000590215 CABP1Q9NZU7 370 aa26.33■■□□□ 1.81
MBD1-223ENST00000590215 ACEP12821 1306 aa26.33■■□□□ 1.81
MBD1-223ENST00000590215 SPATA31A6Q5VVP1 1343 aa26.33■■□□□ 1.81
MBD1-223ENST00000590215 SPATA31A3Q5VYP0 1347 aa26.33■■□□□ 1.81
MBD1-223ENST00000590215 TMF1P82094 1093 aa26.31■■□□□ 1.8
MBD1-223ENST00000590215 HSPA5P11021 654 aaKnown RBP26.3■■□□□ 1.8
MBD1-223ENST00000590215 DISP3Q9P2K9 1392 aa26.3■■□□□ 1.8
MBD1-223ENST00000590215 TNS3Q68CZ2 1445 aa26.29■■□□□ 1.8
MBD1-223ENST00000590215 TRPM3Q9HCF6 1732 aaPredicted RBP26.28■■□□□ 1.8
MBD1-223ENST00000590215 COL22A1Q8NFW1 1626 aaPredicted RBP26.26■■□□□ 1.79
MBD1-223ENST00000590215 BRD4O60885 1362 aaPredicted RBP26.25■■□□□ 1.79
MBD1-223ENST00000590215 MED1Q15648 1581 aaPredicted RBP26.24■■□□□ 1.79
MBD1-223ENST00000590215 CDCA8Q53HL2 280 aa26.24■■□□□ 1.79
MBD1-223ENST00000590215 CPSF1Q10570 1443 aaKnown RBP26.23■■□□□ 1.79
MBD1-223ENST00000590215 ARHGEF10O15013 1369 aa26.23■■□□□ 1.79
MBD1-223ENST00000590215 ZNF692Q9BU19 519 aaPredicted RBP26.23■■□□□ 1.79
MBD1-223ENST00000590215 NINLQ9Y2I6 1382 aa26.22■■□□□ 1.79
MBD1-223ENST00000590215 LRP6O75581 1613 aa26.22■■□□□ 1.79
MBD1-223ENST00000590215 USP6P35125 1406 aa26.22■■□□□ 1.79
MBD1-223ENST00000590215 ALS2Q96Q42 1657 aa26.21■■□□□ 1.79
MBD1-223ENST00000590215 SSH2Q76I76 1423 aa26.21■■□□□ 1.79
MBD1-223ENST00000590215 CD163L1Q9NR16 1453 aa26.2■■□□□ 1.78
MBD1-223ENST00000590215 SLC12A5Q9H2X9 1139 aa26.2■■□□□ 1.78
MBD1-223ENST00000590215 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
MBD1-223ENST00000590215 PAK3O75914 559 aaPredicted RBP26.17■■□□□ 1.78
MBD1-223ENST00000590215 AKAP12Q02952 1782 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms