RNA–Protein interactions for RNA: ENST00000590153.1

SSH2-211, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 4 BASIC

Gene SSH2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-211ENST00000590153 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
SSH2-211ENST00000590153 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
SSH2-211ENST00000590153 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
SSH2-211ENST00000590153 MST1RQ04912 1400 aa23.72■■□□□ 1.39
SSH2-211ENST00000590153 NBPF8Q3BBV2 869 aa23.71■■□□□ 1.39
SSH2-211ENST00000590153 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
SSH2-211ENST00000590153 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
SSH2-211ENST00000590153 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
SSH2-211ENST00000590153 BRINP3Q76B58 766 aa23.66■■□□□ 1.38
SSH2-211ENST00000590153 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
SSH2-211ENST00000590153 TRPM1Q7Z4N2 1603 aa23.65■■□□□ 1.38
SSH2-211ENST00000590153 CDC42BPGQ6DT37 1551 aa23.65■■□□□ 1.38
SSH2-211ENST00000590153 TONSLQ96HA7 1378 aa23.64■■□□□ 1.37
SSH2-211ENST00000590153 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
SSH2-211ENST00000590153 ARHGEF28Q8N1W1 1705 aaKnown RBP23.62■■□□□ 1.37
SSH2-211ENST00000590153 POGKQ9P215 609 aa23.62■■□□□ 1.37
SSH2-211ENST00000590153 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
SSH2-211ENST00000590153 NHSL1Q5SYE7 1610 aa23.61■■□□□ 1.37
SSH2-211ENST00000590153 GPRASP1Q5JY77 1395 aa23.6■■□□□ 1.37
SSH2-211ENST00000590153 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
SSH2-211ENST00000590153 ORAI2Q96SN7 254 aa23.59■■□□□ 1.37
SSH2-211ENST00000590153 FMN2Q9NZ56 1722 aa23.58■■□□□ 1.37
SSH2-211ENST00000590153 RGS17Q9UGC6 210 aaPredicted RBP23.57■■□□□ 1.36
SSH2-211ENST00000590153 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
SSH2-211ENST00000590153 SHPRHQ149N8 1683 aa23.56■■□□□ 1.36
SSH2-211ENST00000590153 SOCS7O14512 581 aa23.55■■□□□ 1.36
SSH2-211ENST00000590153 MINK1Q8N4C8 1332 aaPredicted RBP23.54■■□□□ 1.36
SSH2-211ENST00000590153 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
SSH2-211ENST00000590153 CCER1Q8TC90 406 aaPredicted RBP23.53■■□□□ 1.36
SSH2-211ENST00000590153 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
SSH2-211ENST00000590153 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
SSH2-211ENST00000590153 ROCK2O75116 1388 aaKnown RBP23.52■■□□□ 1.36
SSH2-211ENST00000590153 RALGAPBQ86X10 1494 aa23.51■■□□□ 1.35
SSH2-211ENST00000590153 NUTM2FA1L443 756 aa23.51■■□□□ 1.35
SSH2-211ENST00000590153 DDX17Q92841 729 aaKnown RBP23.51■■□□□ 1.35
SSH2-211ENST00000590153 LRP6O75581 1613 aa23.51■■□□□ 1.35
SSH2-211ENST00000590153 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
SSH2-211ENST00000590153 USP32Q8NFA0 1604 aa23.49■■□□□ 1.35
SSH2-211ENST00000590153 CENPJQ9HC77 1338 aaPredicted RBP23.49■■□□□ 1.35
SSH2-211ENST00000590153 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
SSH2-211ENST00000590153 PRR36Q9H6K5 1346 aa23.48■■□□□ 1.35
SSH2-211ENST00000590153 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
SSH2-211ENST00000590153 JCADQ9P266 1359 aa23.46■■□□□ 1.35
SSH2-211ENST00000590153 CDK19Q9BWU1 502 aa23.45■■□□□ 1.34
SSH2-211ENST00000590153 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
SSH2-211ENST00000590153 FOXO3O43524 673 aa23.43■■□□□ 1.34
SSH2-211ENST00000590153 LRRC59Q96AG4 307 aaKnown RBP23.43■■□□□ 1.34
SSH2-211ENST00000590153 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
SSH2-211ENST00000590153 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
SSH2-211ENST00000590153 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
SSH2-211ENST00000590153 NPHP3Q7Z494 1330 aa23.41■■□□□ 1.34
SSH2-211ENST00000590153 NUDT16Q96DE0 195 aaKnown RBP23.41■■□□□ 1.34
SSH2-211ENST00000590153 PXDNQ92626 1479 aa23.41■■□□□ 1.34
SSH2-211ENST00000590153 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
SSH2-211ENST00000590153 EIF3AQ14152 1382 aaKnown RBP23.4■■□□□ 1.34
SSH2-211ENST00000590153 KIF1AQ12756 1690 aa23.39■■□□□ 1.34
SSH2-211ENST00000590153 ATP7BP35670 1465 aa23.38■■□□□ 1.33
SSH2-211ENST00000590153 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
SSH2-211ENST00000590153 SBNO2Q9Y2G9 1366 aa23.38■■□□□ 1.33
SSH2-211ENST00000590153 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
SSH2-211ENST00000590153 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
SSH2-211ENST00000590153 PLEKHG3A1L390 1219 aa23.35■■□□□ 1.33
SSH2-211ENST00000590153 CCDC61Q9Y6R9 512 aa23.35■■□□□ 1.33
SSH2-211ENST00000590153 SPATA31A6Q5VVP1 1343 aa23.34■■□□□ 1.33
SSH2-211ENST00000590153 PNPLA6Q8IY17 1366 aa23.34■■□□□ 1.33
SSH2-211ENST00000590153 XPCQ01831 940 aaPredicted RBP23.33■■□□□ 1.33
SSH2-211ENST00000590153 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
SSH2-211ENST00000590153 TESK2Q96S53 571 aa23.32■■□□□ 1.32
SSH2-211ENST00000590153 SPATA31A3Q5VYP0 1347 aa23.32■■□□□ 1.32
SSH2-211ENST00000590153 EVC2Q86UK5 1308 aa23.32■■□□□ 1.32
SSH2-211ENST00000590153 TOPAZ1Q8N9V7 1692 aa23.32■■□□□ 1.32
SSH2-211ENST00000590153 ST20-MTHFSA0A0A6YYL1 179 aa23.31■■□□□ 1.32
SSH2-211ENST00000590153 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
SSH2-211ENST00000590153 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
SSH2-211ENST00000590153 POLR3AO14802 1390 aaPredicted RBP23.29■■□□□ 1.32
SSH2-211ENST00000590153 SRPK2P78362 688 aaKnown RBP23.29■■□□□ 1.32
SSH2-211ENST00000590153 PSME1Q06323 249 aa23.29■■□□□ 1.32
SSH2-211ENST00000590153 SBNO1A3KN83 1393 aa23.28■■□□□ 1.32
SSH2-211ENST00000590153 PUS7Q96PZ0 661 aaKnown RBP23.27■■□□□ 1.32
SSH2-211ENST00000590153 TRPM3Q9HCF6 1732 aaPredicted RBP23.27■■□□□ 1.32
SSH2-211ENST00000590153 ACEP12821 1306 aa23.26■■□□□ 1.31
SSH2-211ENST00000590153 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
SSH2-211ENST00000590153 CABP1Q9NZU7 370 aa23.25■■□□□ 1.31
SSH2-211ENST00000590153 USP47Q96K76 1375 aa23.24■■□□□ 1.31
SSH2-211ENST00000590153 MARF1Q9Y4F3 1742 aaKnown RBP23.23■■□□□ 1.31
SSH2-211ENST00000590153 PPIP5K1Q6PFW1 1433 aa23.23■■□□□ 1.31
SSH2-211ENST00000590153 SLC24A1O60721 1099 aa23.22■■□□□ 1.31
SSH2-211ENST00000590153 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
SSH2-211ENST00000590153 ALS2Q96Q42 1657 aa23.21■■□□□ 1.31
SSH2-211ENST00000590153 NUTM2BA6NNL0 878 aaPredicted RBP23.2■■□□□ 1.3
SSH2-211ENST00000590153 NUTM2EB1AL46 878 aaPredicted RBP23.2■■□□□ 1.3
SSH2-211ENST00000590153 NUTM2AQ8IVF1 878 aaPredicted RBP23.2■■□□□ 1.3
SSH2-211ENST00000590153 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
SSH2-211ENST00000590153 SSH2Q76I76 1423 aa23.16■■□□□ 1.3
SSH2-211ENST00000590153 CPSF1Q10570 1443 aaKnown RBP23.16■■□□□ 1.3
SSH2-211ENST00000590153 ARHGEF10O15013 1369 aa23.15■■□□□ 1.3
SSH2-211ENST00000590153 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
SSH2-211ENST00000590153 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
SSH2-211ENST00000590153 ABCA3Q99758 1704 aa23.15■■□□□ 1.3
SSH2-211ENST00000590153 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms