RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 ATF3P18847 181 aa30.19■■■□□ 2.42
R3HDM4-204ENST00000589428 PRAM1Q96QH2 718 aa30.19■■■□□ 2.42
R3HDM4-204ENST00000589428 POGKQ9P215 609 aa30.19■■■□□ 2.42
R3HDM4-204ENST00000589428 ARHGEF28Q8N1W1 1705 aaKnown RBP30.18■■■□□ 2.42
R3HDM4-204ENST00000589428 CADPS2Q86UW7 1296 aa30.18■■■□□ 2.42
R3HDM4-204ENST00000589428 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
R3HDM4-204ENST00000589428 PIP4K2BP78356 416 aa30.15■■■□□ 2.42
R3HDM4-204ENST00000589428 GPRASP1Q5JY77 1395 aa30.14■■■□□ 2.42
R3HDM4-204ENST00000589428 SAFB2Q14151 953 aaKnown RBP eCLIP30.14■■■□□ 2.42
R3HDM4-204ENST00000589428 CDC42BPGQ6DT37 1551 aa30.13■■■□□ 2.41
R3HDM4-204ENST00000589428 CARD11Q9BXL7 1154 aa30.09■■■□□ 2.41
R3HDM4-204ENST00000589428 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
R3HDM4-204ENST00000589428 EIF3AQ14152 1382 aaKnown RBP30.07■■■□□ 2.4
R3HDM4-204ENST00000589428 ILDR1Q86SU0 546 aaPredicted RBP30.07■■■□□ 2.4
R3HDM4-204ENST00000589428 MST1RQ04912 1400 aa30.06■■■□□ 2.4
R3HDM4-204ENST00000589428 ADGRB2O60241 1585 aa30.05■■■□□ 2.4
R3HDM4-204ENST00000589428 MINK1Q8N4C8 1332 aaPredicted RBP30.04■■■□□ 2.4
R3HDM4-204ENST00000589428 CENPJQ9HC77 1338 aaPredicted RBP30.04■■■□□ 2.4
R3HDM4-204ENST00000589428 ROBO1Q9Y6N7 1651 aa30.03■■■□□ 2.4
R3HDM4-204ENST00000589428 HIRIP3Q9BW71 556 aaPredicted RBP30.01■■■□□ 2.39
R3HDM4-204ENST00000589428 FMN2Q9NZ56 1722 aa30■■■□□ 2.39
R3HDM4-204ENST00000589428 QRICH2Q9H0J4 1663 aa30■■■□□ 2.39
R3HDM4-204ENST00000589428 C1orf167Q5SNV9 1468 aa29.99■■■□□ 2.39
R3HDM4-204ENST00000589428 NUTM2FA1L443 756 aa29.94■■■□□ 2.38
R3HDM4-204ENST00000589428 WASLO00401 505 aaPredicted RBP29.93■■■□□ 2.38
R3HDM4-204ENST00000589428 BRINP3Q76B58 766 aa29.93■■■□□ 2.38
R3HDM4-204ENST00000589428 TULP4Q9NRJ4 1543 aa29.9■■■□□ 2.38
R3HDM4-204ENST00000589428 ANKARQ7Z5J8 1434 aa29.9■■■□□ 2.38
R3HDM4-204ENST00000589428 USP47Q96K76 1375 aa29.89■■■□□ 2.38
R3HDM4-204ENST00000589428 HSPA1LP34931 641 aa29.88■■■□□ 2.37
R3HDM4-204ENST00000589428 ESCO1Q5FWF5 840 aa29.88■■■□□ 2.37
R3HDM4-204ENST00000589428 ORAI2Q96SN7 254 aa29.87■■■□□ 2.37
R3HDM4-204ENST00000589428 SBNO2Q9Y2G9 1366 aa29.86■■■□□ 2.37
R3HDM4-204ENST00000589428 AHDC1Q5TGY3 1603 aaPredicted RBP29.86■■■□□ 2.37
R3HDM4-204ENST00000589428 USP32Q8NFA0 1604 aa29.86■■■□□ 2.37
R3HDM4-204ENST00000589428 CDK19Q9BWU1 502 aa29.85■■■□□ 2.37
R3HDM4-204ENST00000589428 EIF4G2P78344 907 aaKnown RBP eCLIP29.85■■■□□ 2.37
R3HDM4-204ENST00000589428 PHLPP1O60346 1717 aa29.83■■■□□ 2.37
R3HDM4-204ENST00000589428 NHSL1Q5SYE7 1610 aa29.83■■■□□ 2.37
R3HDM4-204ENST00000589428 HSPA5P11021 654 aaKnown RBP29.83■■■□□ 2.37
R3HDM4-204ENST00000589428 KIF1AQ12756 1690 aa29.83■■■□□ 2.37
R3HDM4-204ENST00000589428 EVC2Q86UK5 1308 aa29.83■■■□□ 2.37
R3HDM4-204ENST00000589428 RGPD8O14715 1765 aaPredicted RBP29.83■■■□□ 2.37
R3HDM4-204ENST00000589428 ATP7BP35670 1465 aa29.82■■■□□ 2.36
R3HDM4-204ENST00000589428 SRPK2P78362 688 aaKnown RBP29.82■■■□□ 2.36
R3HDM4-204ENST00000589428 ST20-MTHFSA0A0A6YYL1 179 aa29.81■■■□□ 2.36
R3HDM4-204ENST00000589428 PRR36Q9H6K5 1346 aa29.81■■■□□ 2.36
R3HDM4-204ENST00000589428 ZNF316A6NFI3 1004 aaPredicted RBP29.8■■■□□ 2.36
R3HDM4-204ENST00000589428 ITSN1Q15811 1721 aa29.8■■■□□ 2.36
R3HDM4-204ENST00000589428 NUDT16Q96DE0 195 aaKnown RBP29.78■■■□□ 2.36
R3HDM4-204ENST00000589428 PHF8Q9UPP1 1060 aa29.78■■■□□ 2.36
R3HDM4-204ENST00000589428 COL16A1Q07092 1604 aaPredicted RBP29.77■■■□□ 2.36
R3HDM4-204ENST00000589428 NPHP3Q7Z494 1330 aa29.77■■■□□ 2.36
R3HDM4-204ENST00000589428 CABP2Q9NPB3 220 aa29.76■■■□□ 2.35
R3HDM4-204ENST00000589428 DDX17Q92841 729 aaKnown RBP29.75■■■□□ 2.35
R3HDM4-204ENST00000589428 SLC24A1O60721 1099 aa29.74■■■□□ 2.35
R3HDM4-204ENST00000589428 TOPAZ1Q8N9V7 1692 aa29.74■■■□□ 2.35
R3HDM4-204ENST00000589428 FOXO3O43524 673 aa29.73■■■□□ 2.35
R3HDM4-204ENST00000589428 TESK2Q96S53 571 aa29.73■■■□□ 2.35
R3HDM4-204ENST00000589428 PMFBP1Q8TBY8 1022 aa29.72■■■□□ 2.35
R3HDM4-204ENST00000589428 CCDC61Q9Y6R9 512 aa29.72■■■□□ 2.35
R3HDM4-204ENST00000589428 ATAD2Q6PL18 1390 aa29.69■■■□□ 2.34
R3HDM4-204ENST00000589428 PPIP5K1Q6PFW1 1433 aa29.68■■■□□ 2.34
R3HDM4-204ENST00000589428 SOS2Q07890 1332 aaPredicted RBP29.68■■■□□ 2.34
R3HDM4-204ENST00000589428 PXDNQ92626 1479 aa29.68■■■□□ 2.34
R3HDM4-204ENST00000589428 NGDNQ8NEJ9 315 aaKnown RBP29.67■■■□□ 2.34
R3HDM4-204ENST00000589428 TMF1P82094 1093 aa29.66■■■□□ 2.34
R3HDM4-204ENST00000589428 JCADQ9P266 1359 aa29.66■■■□□ 2.34
R3HDM4-204ENST00000589428 XPCQ01831 940 aaPredicted RBP29.65■■■□□ 2.34
R3HDM4-204ENST00000589428 LRRC59Q96AG4 307 aaKnown RBP29.65■■■□□ 2.34
R3HDM4-204ENST00000589428 PSME1Q06323 249 aa29.63■■■□□ 2.33
R3HDM4-204ENST00000589428 PLEKHG3A1L390 1219 aa29.62■■■□□ 2.33
R3HDM4-204ENST00000589428 KRT28Q7Z3Y7 464 aa29.62■■■□□ 2.33
R3HDM4-204ENST00000589428 DISP3Q9P2K9 1392 aa29.62■■■□□ 2.33
R3HDM4-204ENST00000589428 PUS7Q96PZ0 661 aaKnown RBP29.6■■■□□ 2.33
R3HDM4-204ENST00000589428 POLR3AO14802 1390 aaPredicted RBP29.6■■■□□ 2.33
R3HDM4-204ENST00000589428 SHPRHQ149N8 1683 aa29.6■■■□□ 2.33
R3HDM4-204ENST00000589428 CABP1Q9NZU7 370 aa29.59■■■□□ 2.33
R3HDM4-204ENST00000589428 ACEP12821 1306 aa29.59■■■□□ 2.33
R3HDM4-204ENST00000589428 CDCA8Q53HL2 280 aa29.59■■■□□ 2.33
R3HDM4-204ENST00000589428 SBNO1A3KN83 1393 aa29.56■■■□□ 2.32
R3HDM4-204ENST00000589428 C11orf95C9JLR9 678 aaPredicted RBP29.56■■■□□ 2.32
R3HDM4-204ENST00000589428 TNS3Q68CZ2 1445 aa29.55■■■□□ 2.32
R3HDM4-204ENST00000589428 PNPLA6Q8IY17 1366 aa29.55■■■□□ 2.32
R3HDM4-204ENST00000589428 TRPM3Q9HCF6 1732 aaPredicted RBP29.54■■■□□ 2.32
R3HDM4-204ENST00000589428 TMC1Q8TDI8 760 aa29.54■■■□□ 2.32
R3HDM4-204ENST00000589428 SPATA31A3Q5VYP0 1347 aa29.53■■■□□ 2.32
R3HDM4-204ENST00000589428 WASHC2AQ641Q2 1341 aa29.53■■■□□ 2.32
R3HDM4-204ENST00000589428 NINLQ9Y2I6 1382 aa29.52■■■□□ 2.32
R3HDM4-204ENST00000589428 SPATA31A6Q5VVP1 1343 aa29.52■■■□□ 2.32
R3HDM4-204ENST00000589428 CCDC7Q96M83 1385 aa29.51■■■□□ 2.31
R3HDM4-204ENST00000589428 KIF7Q2M1P5 1343 aa29.5■■■□□ 2.31
R3HDM4-204ENST00000589428 ARHGEF10O15013 1369 aa29.49■■■□□ 2.31
R3HDM4-204ENST00000589428 PAK3O75914 559 aaPredicted RBP29.49■■■□□ 2.31
R3HDM4-204ENST00000589428 LMOD2Q6P5Q4 547 aa29.49■■■□□ 2.31
R3HDM4-204ENST00000589428 COL22A1Q8NFW1 1626 aaPredicted RBP29.48■■■□□ 2.31
R3HDM4-204ENST00000589428 USP6P35125 1406 aa29.48■■■□□ 2.31
R3HDM4-204ENST00000589428 AKAP12Q02952 1782 aa29.48■■■□□ 2.31
R3HDM4-204ENST00000589428 ZNF692Q9BU19 519 aaPredicted RBP29.47■■■□□ 2.31
R3HDM4-204ENST00000589428 BRD4O60885 1362 aaPredicted RBP29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms