RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 KIF7Q2M1P5 1343 aa31.58■■■□□ 2.65
ACTN4-210ENST00000588618 CCDC7Q96M83 1385 aa31.58■■■□□ 2.65
ACTN4-210ENST00000588618 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.57■■■□□ 2.64
ACTN4-210ENST00000588618 TMF1P82094 1093 aa31.56■■■□□ 2.64
ACTN4-210ENST00000588618 TULP4Q9NRJ4 1543 aa31.56■■■□□ 2.64
ACTN4-210ENST00000588618 MINK1Q8N4C8 1332 aaPredicted RBP31.52■■■□□ 2.64
ACTN4-210ENST00000588618 CDCA8Q53HL2 280 aa31.49■■■□□ 2.63
ACTN4-210ENST00000588618 NKTRP30414 1462 aaKnown RBP31.49■■■□□ 2.63
ACTN4-210ENST00000588618 POLR3GLQ9BT43 218 aa31.48■■■□□ 2.63
ACTN4-210ENST00000588618 EVC2Q86UK5 1308 aa31.47■■■□□ 2.63
ACTN4-210ENST00000588618 ADGRB2O60241 1585 aa31.46■■■□□ 2.63
ACTN4-210ENST00000588618 PROSER2Q86WR7 435 aaPredicted RBP31.46■■■□□ 2.63
ACTN4-210ENST00000588618 NALCNQ8IZF0 1738 aa31.45■■■□□ 2.63
ACTN4-210ENST00000588618 RBM33Q96EV2 1170 aaKnown RBP31.44■■■□□ 2.62
ACTN4-210ENST00000588618 MYOM1P52179 1685 aa31.43■■■□□ 2.62
ACTN4-210ENST00000588618 ZNF335Q9H4Z2 1342 aaPredicted RBP31.43■■■□□ 2.62
ACTN4-210ENST00000588618 C14orf37Q86TY3 774 aa31.42■■■□□ 2.62
ACTN4-210ENST00000588618 DDX10Q13206 875 aaKnown RBP31.41■■■□□ 2.62
ACTN4-210ENST00000588618 SRPK2P78362 688 aaKnown RBP31.38■■■□□ 2.61
ACTN4-210ENST00000588618 XIRP1Q702N8 1843 aaKnown RBP31.37■■■□□ 2.61
ACTN4-210ENST00000588618 CABP2Q9NPB3 220 aa31.37■■■□□ 2.61
ACTN4-210ENST00000588618 CDK19Q9BWU1 502 aa31.35■■■□□ 2.61
ACTN4-210ENST00000588618 WASLO00401 505 aaPredicted RBP31.35■■■□□ 2.61
ACTN4-210ENST00000588618 TMEM94Q12767 1356 aa31.33■■■□□ 2.61
ACTN4-210ENST00000588618 ADGRL3Q9HAR2 1447 aa31.33■■■□□ 2.61
ACTN4-210ENST00000588618 PUS7Q96PZ0 661 aaKnown RBP31.31■■■□□ 2.6
ACTN4-210ENST00000588618 NCOA3Q9Y6Q9 1424 aa31.3■■■□□ 2.6
ACTN4-210ENST00000588618 CDC42BPGQ6DT37 1551 aa31.3■■■□□ 2.6
ACTN4-210ENST00000588618 LRRC7Q96NW7 1537 aa31.29■■■□□ 2.6
ACTN4-210ENST00000588618 USP32Q8NFA0 1604 aa31.29■■■□□ 2.6
ACTN4-210ENST00000588618 FMN2Q9NZ56 1722 aa31.29■■■□□ 2.6
ACTN4-210ENST00000588618 ATAD2Q6PL18 1390 aa31.28■■■□□ 2.6
ACTN4-210ENST00000588618 ATP7BP35670 1465 aa31.27■■■□□ 2.6
ACTN4-210ENST00000588618 RGPD8O14715 1765 aaPredicted RBP31.27■■■□□ 2.6
ACTN4-210ENST00000588618 PRR36Q9H6K5 1346 aa31.26■■■□□ 2.59
ACTN4-210ENST00000588618 DIEXFQ68CQ4 756 aaKnown RBP31.26■■■□□ 2.59
ACTN4-210ENST00000588618 C19orf44Q9H6X5 657 aa31.26■■■□□ 2.59
ACTN4-210ENST00000588618 TMC1Q8TDI8 760 aa31.24■■■□□ 2.59
ACTN4-210ENST00000588618 TOPAZ1Q8N9V7 1692 aa31.24■■■□□ 2.59
ACTN4-210ENST00000588618 MSH6P52701 1360 aa31.23■■■□□ 2.59
ACTN4-210ENST00000588618 LTBP4Q8N2S1 1624 aa31.22■■■□□ 2.59
ACTN4-210ENST00000588618 NUTM2FA1L443 756 aa31.21■■■□□ 2.59
ACTN4-210ENST00000588618 SLC12A5Q9H2X9 1139 aa31.21■■■□□ 2.59
ACTN4-210ENST00000588618 ATF3P18847 181 aa31.2■■■□□ 2.58
ACTN4-210ENST00000588618 NUDT16Q96DE0 195 aaKnown RBP31.2■■■□□ 2.58
ACTN4-210ENST00000588618 NINLQ9Y2I6 1382 aa31.18■■■□□ 2.58
ACTN4-210ENST00000588618 PANK3Q9H999 370 aa31.18■■■□□ 2.58
ACTN4-210ENST00000588618 CCDC61Q9Y6R9 512 aa31.18■■■□□ 2.58
ACTN4-210ENST00000588618 CD163L1Q9NR16 1453 aa31.17■■■□□ 2.58
ACTN4-210ENST00000588618 DCCP43146 1447 aa31.16■■■□□ 2.58
ACTN4-210ENST00000588618 ITSN1Q15811 1721 aa31.16■■■□□ 2.58
ACTN4-210ENST00000588618 PPIP5K1Q6PFW1 1433 aa31.16■■■□□ 2.58
ACTN4-210ENST00000588618 CADPS2Q86UW7 1296 aa31.15■■■□□ 2.58
ACTN4-210ENST00000588618 ANKARQ7Z5J8 1434 aa31.15■■■□□ 2.58
ACTN4-210ENST00000588618 CABP1Q9NZU7 370 aa31.14■■■□□ 2.58
ACTN4-210ENST00000588618 PER1O15534 1290 aaPredicted RBP31.12■■■□□ 2.57
ACTN4-210ENST00000588618 A0A1W2PP64 1363 aa31.1■■■□□ 2.57
ACTN4-210ENST00000588618 ANKRD36BQ8N2N9 1353 aa31.1■■■□□ 2.57
ACTN4-210ENST00000588618 CARD14Q9BXL6 1004 aa31.1■■■□□ 2.57
ACTN4-210ENST00000588618 AKAP12Q02952 1782 aa31.09■■■□□ 2.57
ACTN4-210ENST00000588618 TERF2IPQ9NYB0 399 aa31.09■■■□□ 2.57
ACTN4-210ENST00000588618 HDGFL2Q7Z4V5 671 aaPredicted RBP31.07■■■□□ 2.56
ACTN4-210ENST00000588618 MST1RQ04912 1400 aa31.06■■■□□ 2.56
ACTN4-210ENST00000588618 CPSF1Q10570 1443 aaKnown RBP31.05■■■□□ 2.56
ACTN4-210ENST00000588618 ESCO1Q5FWF5 840 aa31.04■■■□□ 2.56
ACTN4-210ENST00000588618 MON2Q7Z3U7 1717 aa31.04■■■□□ 2.56
ACTN4-210ENST00000588618 C1orf167Q5SNV9 1468 aa31.03■■■□□ 2.56
ACTN4-210ENST00000588618 PLEKHG3A1L390 1219 aa31.03■■■□□ 2.56
ACTN4-210ENST00000588618 NSD3Q9BZ95 1437 aa31.02■■■□□ 2.56
ACTN4-210ENST00000588618 PMFBP1Q8TBY8 1022 aa31.01■■■□□ 2.56
ACTN4-210ENST00000588618 NGDNQ8NEJ9 315 aaKnown RBP31.01■■■□□ 2.55
ACTN4-210ENST00000588618 KNSTRNQ9Y448 316 aa31.01■■■□□ 2.55
ACTN4-210ENST00000588618 PHF8Q9UPP1 1060 aa31■■■□□ 2.55
ACTN4-210ENST00000588618 ACEP12821 1306 aa30.99■■■□□ 2.55
ACTN4-210ENST00000588618 POLR3AO14802 1390 aaPredicted RBP30.98■■■□□ 2.55
ACTN4-210ENST00000588618 ORAI2Q96SN7 254 aa30.98■■■□□ 2.55
ACTN4-210ENST00000588618 ZNF692Q9BU19 519 aaPredicted RBP30.98■■■□□ 2.55
ACTN4-210ENST00000588618 NRKQ7Z2Y5 1582 aa30.98■■■□□ 2.55
ACTN4-210ENST00000588618 AMER1Q5JTC6 1135 aaPredicted RBP30.96■■■□□ 2.55
ACTN4-210ENST00000588618 SLAIN2Q9P270 581 aa30.96■■■□□ 2.55
ACTN4-210ENST00000588618 KTN1Q86UP2 1357 aaKnown RBP30.96■■■□□ 2.55
ACTN4-210ENST00000588618 CNGB1Q14028 1251 aaPredicted RBP30.94■■■□□ 2.54
ACTN4-210ENST00000588618 MIER1Q8N108 512 aa30.93■■■□□ 2.54
ACTN4-210ENST00000588618 KIF1AQ12756 1690 aa30.93■■■□□ 2.54
ACTN4-210ENST00000588618 USP6P35125 1406 aa30.92■■■□□ 2.54
ACTN4-210ENST00000588618 KIF20BQ96Q89 1820 aa30.9■■■□□ 2.54
ACTN4-210ENST00000588618 EDC4Q6P2E9 1401 aaKnown RBP30.9■■■□□ 2.54
ACTN4-210ENST00000588618 ANP32CO43423 234 aa30.9■■■□□ 2.54
ACTN4-210ENST00000588618 SSH2Q76I76 1423 aa30.89■■■□□ 2.54
ACTN4-210ENST00000588618 CC2D1BQ5T0F9 858 aaKnown RBP30.89■■■□□ 2.54
ACTN4-210ENST00000588618 PRKRIP1Q9H875 184 aaPredicted RBP30.89■■■□□ 2.54
ACTN4-210ENST00000588618 CGNL1Q0VF96 1302 aa30.88■■■□□ 2.53
ACTN4-210ENST00000588618 NPC1L1Q9UHC9 1359 aa30.88■■■□□ 2.53
ACTN4-210ENST00000588618 PSME1Q06323 249 aa30.87■■■□□ 2.53
ACTN4-210ENST00000588618 TOM1O60784 492 aa30.87■■■□□ 2.53
ACTN4-210ENST00000588618 IQSEC2Q5JU85 1478 aa30.87■■■□□ 2.53
ACTN4-210ENST00000588618 FOXO3O43524 673 aa30.86■■■□□ 2.53
ACTN4-210ENST00000588618 CERKQ8TCT0 537 aa30.85■■■□□ 2.53
ACTN4-210ENST00000588618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.84■■■□□ 2.53
ACTN4-210ENST00000588618 ANKRD26Q9UPS8 1709 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms