RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 RPGRIP1LQ68CZ1 1315 aa20.98■□□□□ 0.95
CLPTM1-208ENST00000588274 QTRT2Q9H974 415 aaKnown RBP20.96■□□□□ 0.95
CLPTM1-208ENST00000588274 SPATA31E1Q6ZUB1 1445 aa20.95■□□□□ 0.95
CLPTM1-208ENST00000588274 ATRNO75882 1429 aa20.95■□□□□ 0.94
CLPTM1-208ENST00000588274 ADAMTS2O95450 1211 aa20.94■□□□□ 0.94
CLPTM1-208ENST00000588274 KNDC1Q76NI1 1749 aa20.94■□□□□ 0.94
CLPTM1-208ENST00000588274 FNBP4Q8N3X1 1017 aaPredicted RBP20.92■□□□□ 0.94
CLPTM1-208ENST00000588274 MARF1Q9Y4F3 1742 aaKnown RBP20.92■□□□□ 0.94
CLPTM1-208ENST00000588274 BCL9LQ86UU0 1499 aa20.91■□□□□ 0.94
CLPTM1-208ENST00000588274 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
CLPTM1-208ENST00000588274 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
CLPTM1-208ENST00000588274 NGLY1Q96IV0 654 aa20.9■□□□□ 0.94
CLPTM1-208ENST00000588274 PIK3C2GO75747 1445 aa20.89■□□□□ 0.94
CLPTM1-208ENST00000588274 FOXD1Q16676 465 aa20.89■□□□□ 0.93
CLPTM1-208ENST00000588274 FMN2Q9NZ56 1722 aa20.89■□□□□ 0.93
CLPTM1-208ENST00000588274 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-208ENST00000588274 PLEKHH1Q9ULM0 1364 aa20.87■□□□□ 0.93
CLPTM1-208ENST00000588274 USP21Q9UK80 565 aa20.87■□□□□ 0.93
CLPTM1-208ENST00000588274 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-208ENST00000588274 NPHP3Q7Z494 1330 aa20.86■□□□□ 0.93
CLPTM1-208ENST00000588274 CCDC144AA2RUR9 1427 aa20.86■□□□□ 0.93
CLPTM1-208ENST00000588274 ATAD2Q6PL18 1390 aa20.85■□□□□ 0.93
CLPTM1-208ENST00000588274 TRPC5Q9UL62 973 aaPredicted RBP20.85■□□□□ 0.93
CLPTM1-208ENST00000588274 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
CLPTM1-208ENST00000588274 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.92
CLPTM1-208ENST00000588274 KIF1AQ12756 1690 aa20.83■□□□□ 0.92
CLPTM1-208ENST00000588274 NRXN1Q9ULB1 1477 aa20.82■□□□□ 0.92
CLPTM1-208ENST00000588274 GLI3P10071 1580 aa20.82■□□□□ 0.92
CLPTM1-208ENST00000588274 ESCO1Q5FWF5 840 aa20.82■□□□□ 0.92
CLPTM1-208ENST00000588274 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
CLPTM1-208ENST00000588274 SLIT2O94813 1529 aa20.82■□□□□ 0.92
CLPTM1-208ENST00000588274 XPCQ01831 940 aaPredicted RBP20.81■□□□□ 0.92
CLPTM1-208ENST00000588274 USP32Q8NFA0 1604 aa20.8■□□□□ 0.92
CLPTM1-208ENST00000588274 FOXO3O43524 673 aa20.8■□□□□ 0.92
CLPTM1-208ENST00000588274 YTHDC2Q9H6S0 1430 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-208ENST00000588274 ABCA3Q99758 1704 aa20.78■□□□□ 0.92
CLPTM1-208ENST00000588274 SPATA31A3Q5VYP0 1347 aa20.77■□□□□ 0.91
CLPTM1-208ENST00000588274 RALGAPBQ86X10 1494 aa20.76■□□□□ 0.91
CLPTM1-208ENST00000588274 TMEM132EQ6IEE7 984 aa20.76■□□□□ 0.91
CLPTM1-208ENST00000588274 STK26Q9P289 416 aa20.76■□□□□ 0.91
CLPTM1-208ENST00000588274 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
CLPTM1-208ENST00000588274 MPHOSPH9Q99550 1183 aa20.75■□□□□ 0.91
CLPTM1-208ENST00000588274 RGPD8O14715 1765 aaPredicted RBP20.74■□□□□ 0.91
CLPTM1-208ENST00000588274 RGL3Q3MIN7 710 aa20.74■□□□□ 0.91
CLPTM1-208ENST00000588274 GJD4Q96KN9 370 aaPredicted RBP20.73■□□□□ 0.91
CLPTM1-208ENST00000588274 TNS3Q68CZ2 1445 aa20.72■□□□□ 0.91
CLPTM1-208ENST00000588274 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
CLPTM1-208ENST00000588274 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
CLPTM1-208ENST00000588274 BRWD3Q6RI45 1802 aa20.71■□□□□ 0.91
CLPTM1-208ENST00000588274 SIRT1Q96EB6 747 aa20.7■□□□□ 0.9
CLPTM1-208ENST00000588274 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
CLPTM1-208ENST00000588274 DLC1Q96QB1 1528 aa20.69■□□□□ 0.9
CLPTM1-208ENST00000588274 C14orf93Q9H972 538 aaKnown RBP20.69■□□□□ 0.9
CLPTM1-208ENST00000588274 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
CLPTM1-208ENST00000588274 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
CLPTM1-208ENST00000588274 TRPM3Q9HCF6 1732 aaPredicted RBP20.67■□□□□ 0.9
CLPTM1-208ENST00000588274 NRAPQ86VF7 1730 aa20.65■□□□□ 0.9
CLPTM1-208ENST00000588274 BLMP54132 1417 aaPredicted RBP20.65■□□□□ 0.9
CLPTM1-208ENST00000588274 SBNO1A3KN83 1393 aa20.65■□□□□ 0.9
CLPTM1-208ENST00000588274 KRT28Q7Z3Y7 464 aa20.65■□□□□ 0.9
CLPTM1-208ENST00000588274 CFAP70Q5T0N1 1121 aa20.64■□□□□ 0.89
CLPTM1-208ENST00000588274 CCDC125Q86Z20 511 aa20.64■□□□□ 0.89
CLPTM1-208ENST00000588274 ANKARQ7Z5J8 1434 aa20.63■□□□□ 0.89
CLPTM1-208ENST00000588274 PHF8Q9UPP1 1060 aa20.63■□□□□ 0.89
CLPTM1-208ENST00000588274 ALS2Q96Q42 1657 aa20.63■□□□□ 0.89
CLPTM1-208ENST00000588274 CRYBG1Q9Y4K1 1723 aa20.62■□□□□ 0.89
CLPTM1-208ENST00000588274 CABLES1Q8TDN4 633 aa20.61■□□□□ 0.89
CLPTM1-208ENST00000588274 DHX57Q6P158 1386 aaKnown RBP20.6■□□□□ 0.89
CLPTM1-208ENST00000588274 VPS72Q15906 364 aa20.6■□□□□ 0.89
CLPTM1-208ENST00000588274 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
CLPTM1-208ENST00000588274 ZRANB1Q9UGI0 708 aa20.6■□□□□ 0.89
CLPTM1-208ENST00000588274 ONECUT3O60422 494 aaPredicted RBP20.59■□□□□ 0.89
CLPTM1-208ENST00000588274 ARHGEF10O15013 1369 aa20.59■□□□□ 0.89
CLPTM1-208ENST00000588274 PRR36Q9H6K5 1346 aa20.56■□□□□ 0.88
CLPTM1-208ENST00000588274 SEPT12Q8IYM1 358 aa20.56■□□□□ 0.88
CLPTM1-208ENST00000588274 TULP4Q9NRJ4 1543 aa20.56■□□□□ 0.88
CLPTM1-208ENST00000588274 SAFB2Q14151 953 aaKnown RBP eCLIP20.55■□□□□ 0.88
CLPTM1-208ENST00000588274 DEFB132Q7Z7B7 95 aa20.55■□□□□ 0.88
CLPTM1-208ENST00000588274 LRP5O75197 1615 aa20.54■□□□□ 0.88
CLPTM1-208ENST00000588274 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
CLPTM1-208ENST00000588274 PSME1Q06323 249 aa20.54■□□□□ 0.88
CLPTM1-208ENST00000588274 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
CLPTM1-208ENST00000588274 COL14A1Q05707 1796 aaKnown RBP20.53■□□□□ 0.88
CLPTM1-208ENST00000588274 THSD7AQ9UPZ6 1657 aa20.52■□□□□ 0.88
CLPTM1-208ENST00000588274 PMFBP1Q8TBY8 1022 aa20.52■□□□□ 0.88
CLPTM1-208ENST00000588274 ARHGEF28Q8N1W1 1705 aaKnown RBP20.5■□□□□ 0.87
CLPTM1-208ENST00000588274 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
CLPTM1-208ENST00000588274 ATP7BP35670 1465 aa20.5■□□□□ 0.87
CLPTM1-208ENST00000588274 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
CLPTM1-208ENST00000588274 PLEKHG5O94827 1062 aa20.47■□□□□ 0.87
CLPTM1-208ENST00000588274 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
CLPTM1-208ENST00000588274 KRT27Q7Z3Y8 459 aa20.47■□□□□ 0.87
CLPTM1-208ENST00000588274 TNS1Q9HBL0 1735 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-208ENST00000588274 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
CLPTM1-208ENST00000588274 PHRF1Q9P1Y6 1649 aaKnown RBP20.45■□□□□ 0.87
CLPTM1-208ENST00000588274 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
CLPTM1-208ENST00000588274 LMOD2Q6P5Q4 547 aa20.45■□□□□ 0.86
CLPTM1-208ENST00000588274 POGKQ9P215 609 aa20.45■□□□□ 0.86
CLPTM1-208ENST00000588274 MINK1Q8N4C8 1332 aaPredicted RBP20.45■□□□□ 0.86
CLPTM1-208ENST00000588274 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms