RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 TECPR2O15040 1411 aa29.25■■■□□ 2.27
TRAPPC6A-203ENST00000587818 SAFB2Q14151 953 aaKnown RBP eCLIP29.23■■■□□ 2.27
TRAPPC6A-203ENST00000587818 NUTM2BA6NNL0 878 aaPredicted RBP29.22■■■□□ 2.27
TRAPPC6A-203ENST00000587818 NUTM2EB1AL46 878 aaPredicted RBP29.22■■■□□ 2.27
TRAPPC6A-203ENST00000587818 NUTM2AQ8IVF1 878 aaPredicted RBP29.22■■■□□ 2.27
TRAPPC6A-203ENST00000587818 ESCO1Q5FWF5 840 aa29.21■■■□□ 2.27
TRAPPC6A-203ENST00000587818 LRRC59Q96AG4 307 aaKnown RBP29.2■■■□□ 2.26
TRAPPC6A-203ENST00000587818 SIRT1Q96EB6 747 aa29.2■■■□□ 2.26
TRAPPC6A-203ENST00000587818 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.26
TRAPPC6A-203ENST00000587818 KNDC1Q76NI1 1749 aa29.19■■■□□ 2.26
TRAPPC6A-203ENST00000587818 POTEAQ6S8J7 498 aa29.18■■■□□ 2.26
TRAPPC6A-203ENST00000587818 PRAM1Q96QH2 718 aa29.18■■■□□ 2.26
TRAPPC6A-203ENST00000587818 TRAK1Q9UPV9 953 aa29.18■■■□□ 2.26
TRAPPC6A-203ENST00000587818 SPATA31A6Q5VVP1 1343 aa29.18■■■□□ 2.26
TRAPPC6A-203ENST00000587818 MEX3CQ5U5Q3 659 aaKnown RBP29.17■■■□□ 2.26
TRAPPC6A-203ENST00000587818 POGKQ9P215 609 aa29.16■■■□□ 2.26
TRAPPC6A-203ENST00000587818 LRP6O75581 1613 aa29.16■■■□□ 2.26
TRAPPC6A-203ENST00000587818 LAMC1P11047 1609 aa29.15■■■□□ 2.26
TRAPPC6A-203ENST00000587818 STAC3Q96MF2 364 aa29.14■■■□□ 2.26
TRAPPC6A-203ENST00000587818 CDC42BPGQ6DT37 1551 aa29.13■■■□□ 2.25
TRAPPC6A-203ENST00000587818 SHPRHQ149N8 1683 aa29.13■■■□□ 2.25
TRAPPC6A-203ENST00000587818 FOXO3O43524 673 aa29.11■■■□□ 2.25
TRAPPC6A-203ENST00000587818 XPCQ01831 940 aaPredicted RBP29.11■■■□□ 2.25
TRAPPC6A-203ENST00000587818 SIN3AQ96ST3 1273 aa29.11■■■□□ 2.25
TRAPPC6A-203ENST00000587818 SOS2Q07890 1332 aaPredicted RBP29.11■■■□□ 2.25
TRAPPC6A-203ENST00000587818 ADGRB1O14514 1584 aa29.1■■■□□ 2.25
TRAPPC6A-203ENST00000587818 PNPLA6Q8IY17 1366 aa29.08■■■□□ 2.25
TRAPPC6A-203ENST00000587818 HIRIP3Q9BW71 556 aaPredicted RBP29.07■■■□□ 2.24
TRAPPC6A-203ENST00000587818 NEUROD1Q13562 356 aa29.06■■■□□ 2.24
TRAPPC6A-203ENST00000587818 MINK1Q8N4C8 1332 aaPredicted RBP29.04■■■□□ 2.24
TRAPPC6A-203ENST00000587818 FMN2Q9NZ56 1722 aa29.04■■■□□ 2.24
TRAPPC6A-203ENST00000587818 DLC1Q96QB1 1528 aa29.04■■■□□ 2.24
TRAPPC6A-203ENST00000587818 NPHP3Q7Z494 1330 aa29.03■■■□□ 2.24
TRAPPC6A-203ENST00000587818 RGPD8O14715 1765 aaPredicted RBP29.03■■■□□ 2.24
TRAPPC6A-203ENST00000587818 ADAMTS2O95450 1211 aa29.01■■■□□ 2.23
TRAPPC6A-203ENST00000587818 NBPF1Q3BBV0 1214 aa29.01■■■□□ 2.23
TRAPPC6A-203ENST00000587818 L3MBTL2Q969R5 705 aa29.01■■■□□ 2.23
TRAPPC6A-203ENST00000587818 PHF8Q9UPP1 1060 aa28.99■■■□□ 2.23
TRAPPC6A-203ENST00000587818 TRIM26Q12899 539 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC6A-203ENST00000587818 C8orf37Q96NL8 207 aa28.98■■■□□ 2.23
TRAPPC6A-203ENST00000587818 KRT28Q7Z3Y7 464 aa28.97■■■□□ 2.23
TRAPPC6A-203ENST00000587818 ZNF772Q68DY9 489 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC6A-203ENST00000587818 PMFBP1Q8TBY8 1022 aa28.96■■■□□ 2.23
TRAPPC6A-203ENST00000587818 PXDNQ92626 1479 aa28.96■■■□□ 2.23
TRAPPC6A-203ENST00000587818 AFF2P51816 1311 aa28.95■■■□□ 2.23
TRAPPC6A-203ENST00000587818 WASLO00401 505 aaPredicted RBP28.92■■■□□ 2.22
TRAPPC6A-203ENST00000587818 NGLY1Q96IV0 654 aa28.92■■■□□ 2.22
TRAPPC6A-203ENST00000587818 PLEKHG5O94827 1062 aa28.9■■■□□ 2.22
TRAPPC6A-203ENST00000587818 PRR36Q9H6K5 1346 aa28.9■■■□□ 2.22
TRAPPC6A-203ENST00000587818 PSME1Q06323 249 aa28.89■■■□□ 2.22
TRAPPC6A-203ENST00000587818 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
TRAPPC6A-203ENST00000587818 SPATA31A3Q5VYP0 1347 aa28.88■■■□□ 2.21
TRAPPC6A-203ENST00000587818 USP32Q8NFA0 1604 aa28.87■■■□□ 2.21
TRAPPC6A-203ENST00000587818 KIF1AQ12756 1690 aa28.86■■■□□ 2.21
TRAPPC6A-203ENST00000587818 KIAA1210Q9ULL0 1709 aa28.86■■■□□ 2.21
TRAPPC6A-203ENST00000587818 ADGRB2O60241 1585 aa28.85■■■□□ 2.21
TRAPPC6A-203ENST00000587818 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
TRAPPC6A-203ENST00000587818 QTRT2Q9H974 415 aaKnown RBP28.85■■■□□ 2.21
TRAPPC6A-203ENST00000587818 RXRBP28702 533 aa28.84■■■□□ 2.21
TRAPPC6A-203ENST00000587818 CDK19Q9BWU1 502 aa28.84■■■□□ 2.21
TRAPPC6A-203ENST00000587818 ANKARQ7Z5J8 1434 aa28.84■■■□□ 2.21
TRAPPC6A-203ENST00000587818 COL22A1Q8NFW1 1626 aaPredicted RBP28.83■■■□□ 2.21
TRAPPC6A-203ENST00000587818 CABLES1Q8TDN4 633 aa28.81■■■□□ 2.2
TRAPPC6A-203ENST00000587818 NUDT16Q96DE0 195 aaKnown RBP28.81■■■□□ 2.2
TRAPPC6A-203ENST00000587818 USP21Q9UK80 565 aa28.79■■■□□ 2.2
TRAPPC6A-203ENST00000587818 NGDNQ8NEJ9 315 aaKnown RBP28.78■■■□□ 2.2
TRAPPC6A-203ENST00000587818 TULP4Q9NRJ4 1543 aa28.78■■■□□ 2.2
TRAPPC6A-203ENST00000587818 EIF3AQ14152 1382 aaKnown RBP28.77■■■□□ 2.2
TRAPPC6A-203ENST00000587818 NBPF8Q3BBV2 869 aa28.77■■■□□ 2.2
TRAPPC6A-203ENST00000587818 FNBP4Q8N3X1 1017 aaPredicted RBP28.75■■■□□ 2.19
TRAPPC6A-203ENST00000587818 TNS3Q68CZ2 1445 aa28.75■■■□□ 2.19
TRAPPC6A-203ENST00000587818 SBNO1A3KN83 1393 aa28.75■■■□□ 2.19
TRAPPC6A-203ENST00000587818 CENPJQ9HC77 1338 aaPredicted RBP28.74■■■□□ 2.19
TRAPPC6A-203ENST00000587818 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
TRAPPC6A-203ENST00000587818 RBM6P78332 1123 aaKnown RBP28.73■■■□□ 2.19
TRAPPC6A-203ENST00000587818 GPRASP1Q5JY77 1395 aa28.73■■■□□ 2.19
TRAPPC6A-203ENST00000587818 PAK3O75914 559 aaPredicted RBP28.71■■■□□ 2.19
TRAPPC6A-203ENST00000587818 CABP2Q9NPB3 220 aa28.7■■■□□ 2.18
TRAPPC6A-203ENST00000587818 SRPK2P78362 688 aaKnown RBP28.69■■■□□ 2.18
TRAPPC6A-203ENST00000587818 TRPC5Q9UL62 973 aaPredicted RBP28.69■■■□□ 2.18
TRAPPC6A-203ENST00000587818 ATP7BP35670 1465 aa28.69■■■□□ 2.18
TRAPPC6A-203ENST00000587818 TRPM1Q7Z4N2 1603 aa28.69■■■□□ 2.18
TRAPPC6A-203ENST00000587818 MARF1Q9Y4F3 1742 aaKnown RBP28.68■■■□□ 2.18
TRAPPC6A-203ENST00000587818 ROCK2O75116 1388 aaKnown RBP28.67■■■□□ 2.18
TRAPPC6A-203ENST00000587818 CCDC61Q9Y6R9 512 aa28.67■■■□□ 2.18
TRAPPC6A-203ENST00000587818 ARHGEF10O15013 1369 aa28.66■■■□□ 2.18
TRAPPC6A-203ENST00000587818 ACEP12821 1306 aa28.65■■■□□ 2.18
TRAPPC6A-203ENST00000587818 BCL9LQ86UU0 1499 aa28.65■■■□□ 2.18
TRAPPC6A-203ENST00000587818 TONSLQ96HA7 1378 aa28.64■■■□□ 2.18
TRAPPC6A-203ENST00000587818 TRPM3Q9HCF6 1732 aaPredicted RBP28.64■■■□□ 2.18
TRAPPC6A-203ENST00000587818 PLEKHG3A1L390 1219 aa28.62■■■□□ 2.17
TRAPPC6A-203ENST00000587818 ATRNO75882 1429 aa28.61■■■□□ 2.17
TRAPPC6A-203ENST00000587818 QRICH2Q9H0J4 1663 aa28.61■■■□□ 2.17
TRAPPC6A-203ENST00000587818 ITSN1Q15811 1721 aa28.61■■■□□ 2.17
TRAPPC6A-203ENST00000587818 FAM83GA6ND36 823 aa28.61■■■□□ 2.17
TRAPPC6A-203ENST00000587818 NUTM2GQ5VZR2 741 aa28.6■■■□□ 2.17
TRAPPC6A-203ENST00000587818 UNC5CLQ8IV45 518 aa28.6■■■□□ 2.17
TRAPPC6A-203ENST00000587818 RGS12O14924 1447 aa28.6■■■□□ 2.17
TRAPPC6A-203ENST00000587818 CDK12Q9NYV4 1490 aaPredicted RBP28.59■■■□□ 2.17
TRAPPC6A-203ENST00000587818 ALS2Q96Q42 1657 aa28.58■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms