RNA–Protein interactions for RNA: ENST00000587511.1

TPGS2-207, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-207ENST00000587511 TRAK1Q9UPV9 953 aa24.26■■□□□ 1.47
TPGS2-207ENST00000587511 ARHGEF28Q8N1W1 1705 aaKnown RBP24.26■■□□□ 1.47
TPGS2-207ENST00000587511 NBPF8Q3BBV2 869 aa24.25■■□□□ 1.47
TPGS2-207ENST00000587511 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
TPGS2-207ENST00000587511 PRAM1Q96QH2 718 aa24.24■■□□□ 1.47
TPGS2-207ENST00000587511 EIF3AQ14152 1382 aaKnown RBP24.24■■□□□ 1.47
TPGS2-207ENST00000587511 WAPLQ7Z5K2 1190 aa24.23■■□□□ 1.47
TPGS2-207ENST00000587511 SLAIN2Q9P270 581 aa24.23■■□□□ 1.47
TPGS2-207ENST00000587511 ADGRB2O60241 1585 aa24.2■■□□□ 1.47
TPGS2-207ENST00000587511 PLEKHH1Q9ULM0 1364 aa24.19■■□□□ 1.46
TPGS2-207ENST00000587511 CARD11Q9BXL7 1154 aa24.18■■□□□ 1.46
TPGS2-207ENST00000587511 MST1RQ04912 1400 aa24.17■■□□□ 1.46
TPGS2-207ENST00000587511 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
TPGS2-207ENST00000587511 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
TPGS2-207ENST00000587511 PIP4K2BP78356 416 aa24.15■■□□□ 1.46
TPGS2-207ENST00000587511 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
TPGS2-207ENST00000587511 FMN2Q9NZ56 1722 aa24.13■■□□□ 1.45
TPGS2-207ENST00000587511 ROBO1Q9Y6N7 1651 aa24.12■■□□□ 1.45
TPGS2-207ENST00000587511 SAFB2Q14151 953 aaKnown RBP eCLIP24.11■■□□□ 1.45
TPGS2-207ENST00000587511 SBNO2Q9Y2G9 1366 aa24.11■■□□□ 1.45
TPGS2-207ENST00000587511 C1orf167Q5SNV9 1468 aa24.11■■□□□ 1.45
TPGS2-207ENST00000587511 ANKARQ7Z5J8 1434 aa24.1■■□□□ 1.45
TPGS2-207ENST00000587511 QRICH2Q9H0J4 1663 aa24.09■■□□□ 1.45
TPGS2-207ENST00000587511 WASLO00401 505 aaPredicted RBP24.08■■□□□ 1.45
TPGS2-207ENST00000587511 MINK1Q8N4C8 1332 aaPredicted RBP24.08■■□□□ 1.44
TPGS2-207ENST00000587511 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
TPGS2-207ENST00000587511 TULP4Q9NRJ4 1543 aa24.05■■□□□ 1.44
TPGS2-207ENST00000587511 AHDC1Q5TGY3 1603 aaPredicted RBP24.04■■□□□ 1.44
TPGS2-207ENST00000587511 KIF1AQ12756 1690 aa24.03■■□□□ 1.44
TPGS2-207ENST00000587511 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
TPGS2-207ENST00000587511 EVC2Q86UK5 1308 aa24.02■■□□□ 1.44
TPGS2-207ENST00000587511 ITSN1Q15811 1721 aa24.01■■□□□ 1.43
TPGS2-207ENST00000587511 NHSL1Q5SYE7 1610 aa24.01■■□□□ 1.43
TPGS2-207ENST00000587511 ESCO1Q5FWF5 840 aa24■■□□□ 1.43
TPGS2-207ENST00000587511 USP47Q96K76 1375 aa24■■□□□ 1.43
TPGS2-207ENST00000587511 CDK19Q9BWU1 502 aa23.99■■□□□ 1.43
TPGS2-207ENST00000587511 PHLPP1O60346 1717 aa23.98■■□□□ 1.43
TPGS2-207ENST00000587511 HSPA1LP34931 641 aa23.98■■□□□ 1.43
TPGS2-207ENST00000587511 NPHP3Q7Z494 1330 aa23.98■■□□□ 1.43
TPGS2-207ENST00000587511 RGPD8O14715 1765 aaPredicted RBP23.97■■□□□ 1.43
TPGS2-207ENST00000587511 PUS7Q96PZ0 661 aaKnown RBP23.97■■□□□ 1.43
TPGS2-207ENST00000587511 USP32Q8NFA0 1604 aa23.96■■□□□ 1.43
TPGS2-207ENST00000587511 ORAI2Q96SN7 254 aa23.96■■□□□ 1.43
TPGS2-207ENST00000587511 CCDC61Q9Y6R9 512 aa23.96■■□□□ 1.43
TPGS2-207ENST00000587511 ATP7BP35670 1465 aa23.95■■□□□ 1.42
TPGS2-207ENST00000587511 SRPK2P78362 688 aaKnown RBP23.95■■□□□ 1.42
TPGS2-207ENST00000587511 NUDT16Q96DE0 195 aaKnown RBP23.95■■□□□ 1.42
TPGS2-207ENST00000587511 PHF8Q9UPP1 1060 aa23.95■■□□□ 1.42
TPGS2-207ENST00000587511 ST20-MTHFSA0A0A6YYL1 179 aa23.94■■□□□ 1.42
TPGS2-207ENST00000587511 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
TPGS2-207ENST00000587511 ATAD2Q6PL18 1390 aa23.92■■□□□ 1.42
TPGS2-207ENST00000587511 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
TPGS2-207ENST00000587511 SOS2Q07890 1332 aaPredicted RBP23.91■■□□□ 1.42
TPGS2-207ENST00000587511 EIF4G2P78344 907 aaKnown RBP eCLIP23.91■■□□□ 1.42
TPGS2-207ENST00000587511 LRRC59Q96AG4 307 aaKnown RBP23.91■■□□□ 1.42
TPGS2-207ENST00000587511 TOPAZ1Q8N9V7 1692 aa23.91■■□□□ 1.42
TPGS2-207ENST00000587511 PRR36Q9H6K5 1346 aa23.9■■□□□ 1.42
TPGS2-207ENST00000587511 CDCA8Q53HL2 280 aa23.9■■□□□ 1.42
TPGS2-207ENST00000587511 TESK2Q96S53 571 aa23.9■■□□□ 1.42
TPGS2-207ENST00000587511 PLEKHG3A1L390 1219 aa23.89■■□□□ 1.41
TPGS2-207ENST00000587511 PSME1Q06323 249 aa23.89■■□□□ 1.41
TPGS2-207ENST00000587511 JCADQ9P266 1359 aa23.89■■□□□ 1.41
TPGS2-207ENST00000587511 TMF1P82094 1093 aa23.88■■□□□ 1.41
TPGS2-207ENST00000587511 FOXO3O43524 673 aa23.87■■□□□ 1.41
TPGS2-207ENST00000587511 CABP2Q9NPB3 220 aa23.87■■□□□ 1.41
TPGS2-207ENST00000587511 PXDNQ92626 1479 aa23.86■■□□□ 1.41
TPGS2-207ENST00000587511 NGDNQ8NEJ9 315 aaKnown RBP23.85■■□□□ 1.41
TPGS2-207ENST00000587511 POLR3AO14802 1390 aaPredicted RBP23.85■■□□□ 1.41
TPGS2-207ENST00000587511 BRD4O60885 1362 aaPredicted RBP23.85■■□□□ 1.41
TPGS2-207ENST00000587511 NINLQ9Y2I6 1382 aa23.85■■□□□ 1.41
TPGS2-207ENST00000587511 PPIP5K1Q6PFW1 1433 aa23.84■■□□□ 1.41
TPGS2-207ENST00000587511 SHPRHQ149N8 1683 aa23.84■■□□□ 1.41
TPGS2-207ENST00000587511 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
TPGS2-207ENST00000587511 SBNO1A3KN83 1393 aa23.83■■□□□ 1.41
TPGS2-207ENST00000587511 KRT28Q7Z3Y7 464 aa23.82■■□□□ 1.4
TPGS2-207ENST00000587511 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
TPGS2-207ENST00000587511 SPATA31A6Q5VVP1 1343 aa23.82■■□□□ 1.4
TPGS2-207ENST00000587511 ZNF692Q9BU19 519 aaPredicted RBP23.8■■□□□ 1.4
TPGS2-207ENST00000587511 ACEP12821 1306 aa23.79■■□□□ 1.4
TPGS2-207ENST00000587511 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
TPGS2-207ENST00000587511 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
TPGS2-207ENST00000587511 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
TPGS2-207ENST00000587511 CABP1Q9NZU7 370 aa23.77■■□□□ 1.4
TPGS2-207ENST00000587511 SPATA31A3Q5VYP0 1347 aa23.77■■□□□ 1.4
TPGS2-207ENST00000587511 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
TPGS2-207ENST00000587511 COL22A1Q8NFW1 1626 aaPredicted RBP23.76■■□□□ 1.39
TPGS2-207ENST00000587511 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
TPGS2-207ENST00000587511 PNPLA6Q8IY17 1366 aa23.75■■□□□ 1.39
TPGS2-207ENST00000587511 DISP3Q9P2K9 1392 aa23.74■■□□□ 1.39
TPGS2-207ENST00000587511 TERF2IPQ9NYB0 399 aa23.73■■□□□ 1.39
TPGS2-207ENST00000587511 AKAP12Q02952 1782 aa23.73■■□□□ 1.39
TPGS2-207ENST00000587511 CPSF1Q10570 1443 aaKnown RBP23.72■■□□□ 1.39
TPGS2-207ENST00000587511 XPCQ01831 940 aaPredicted RBP23.71■■□□□ 1.39
TPGS2-207ENST00000587511 ALS2Q96Q42 1657 aa23.7■■□□□ 1.39
TPGS2-207ENST00000587511 USP6P35125 1406 aa23.7■■□□□ 1.38
TPGS2-207ENST00000587511 HDGFL2Q7Z4V5 671 aaPredicted RBP23.7■■□□□ 1.38
TPGS2-207ENST00000587511 TMC1Q8TDI8 760 aa23.69■■□□□ 1.38
TPGS2-207ENST00000587511 MON2Q7Z3U7 1717 aa23.67■■□□□ 1.38
TPGS2-207ENST00000587511 KTN1Q86UP2 1357 aaKnown RBP23.66■■□□□ 1.38
TPGS2-207ENST00000587511 TTC21AQ8NDW8 1320 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms