RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SPATA31A6Q5VVP1 1343 aa25.83■■□□□ 1.73
TPM4-206ENST00000587201 PLEKHH1Q9ULM0 1364 aa25.82■■□□□ 1.72
TPM4-206ENST00000587201 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
TPM4-206ENST00000587201 RGS17Q9UGC6 210 aaPredicted RBP25.82■■□□□ 1.72
TPM4-206ENST00000587201 CDC42BPGQ6DT37 1551 aa25.81■■□□□ 1.72
TPM4-206ENST00000587201 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
TPM4-206ENST00000587201 SIRT1Q96EB6 747 aa25.8■■□□□ 1.72
TPM4-206ENST00000587201 STAC3Q96MF2 364 aa25.8■■□□□ 1.72
TPM4-206ENST00000587201 SHPRHQ149N8 1683 aa25.79■■□□□ 1.72
TPM4-206ENST00000587201 MEX3CQ5U5Q3 659 aaKnown RBP25.77■■□□□ 1.72
TPM4-206ENST00000587201 ESCO1Q5FWF5 840 aa25.76■■□□□ 1.71
TPM4-206ENST00000587201 LRP6O75581 1613 aa25.75■■□□□ 1.71
TPM4-206ENST00000587201 NUTM2FA1L443 756 aa25.75■■□□□ 1.71
TPM4-206ENST00000587201 NUTM2BA6NNL0 878 aaPredicted RBP25.74■■□□□ 1.71
TPM4-206ENST00000587201 NUTM2EB1AL46 878 aaPredicted RBP25.74■■□□□ 1.71
TPM4-206ENST00000587201 NUTM2AQ8IVF1 878 aaPredicted RBP25.74■■□□□ 1.71
TPM4-206ENST00000587201 PRAM1Q96QH2 718 aa25.74■■□□□ 1.71
TPM4-206ENST00000587201 SAFB2Q14151 953 aaKnown RBP eCLIP25.73■■□□□ 1.71
TPM4-206ENST00000587201 POGKQ9P215 609 aa25.73■■□□□ 1.71
TPM4-206ENST00000587201 ADGRB1O14514 1584 aa25.72■■□□□ 1.71
TPM4-206ENST00000587201 TRAK1Q9UPV9 953 aa25.71■■□□□ 1.71
TPM4-206ENST00000587201 SOS2Q07890 1332 aaPredicted RBP25.7■■□□□ 1.71
TPM4-206ENST00000587201 DLC1Q96QB1 1528 aa25.7■■□□□ 1.7
TPM4-206ENST00000587201 POTEAQ6S8J7 498 aa25.7■■□□□ 1.7
TPM4-206ENST00000587201 PNPLA6Q8IY17 1366 aa25.69■■□□□ 1.7
TPM4-206ENST00000587201 NPHP3Q7Z494 1330 aa25.68■■□□□ 1.7
TPM4-206ENST00000587201 FMN2Q9NZ56 1722 aa25.67■■□□□ 1.7
TPM4-206ENST00000587201 FOXO3O43524 673 aa25.66■■□□□ 1.7
TPM4-206ENST00000587201 XPCQ01831 940 aaPredicted RBP25.62■■□□□ 1.69
TPM4-206ENST00000587201 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
TPM4-206ENST00000587201 HIRIP3Q9BW71 556 aaPredicted RBP25.6■■□□□ 1.69
TPM4-206ENST00000587201 MINK1Q8N4C8 1332 aaPredicted RBP25.6■■□□□ 1.69
TPM4-206ENST00000587201 PXDNQ92626 1479 aa25.6■■□□□ 1.69
TPM4-206ENST00000587201 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
TPM4-206ENST00000587201 KIF1AQ12756 1690 aa25.58■■□□□ 1.68
TPM4-206ENST00000587201 C8orf37Q96NL8 207 aa25.57■■□□□ 1.68
TPM4-206ENST00000587201 PHF8Q9UPP1 1060 aa25.57■■□□□ 1.68
TPM4-206ENST00000587201 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
TPM4-206ENST00000587201 ADAMTS2O95450 1211 aa25.56■■□□□ 1.68
TPM4-206ENST00000587201 AFF2P51816 1311 aa25.56■■□□□ 1.68
TPM4-206ENST00000587201 NEUROD1Q13562 356 aa25.55■■□□□ 1.68
TPM4-206ENST00000587201 RGPD8O14715 1765 aaPredicted RBP25.54■■□□□ 1.68
TPM4-206ENST00000587201 TRIM26Q12899 539 aaPredicted RBP25.54■■□□□ 1.68
TPM4-206ENST00000587201 KRT28Q7Z3Y7 464 aa25.54■■□□□ 1.68
TPM4-206ENST00000587201 L3MBTL2Q969R5 705 aa25.54■■□□□ 1.68
TPM4-206ENST00000587201 KIAA1210Q9ULL0 1709 aa25.54■■□□□ 1.68
TPM4-206ENST00000587201 ANKARQ7Z5J8 1434 aa25.54■■□□□ 1.68
TPM4-206ENST00000587201 ARHGEF28Q8N1W1 1705 aaKnown RBP25.52■■□□□ 1.68
TPM4-206ENST00000587201 WASLO00401 505 aaPredicted RBP25.52■■□□□ 1.68
TPM4-206ENST00000587201 NBPF1Q3BBV0 1214 aa25.52■■□□□ 1.68
TPM4-206ENST00000587201 EIF3AQ14152 1382 aaKnown RBP25.52■■□□□ 1.68
TPM4-206ENST00000587201 COL22A1Q8NFW1 1626 aaPredicted RBP25.52■■□□□ 1.68
TPM4-206ENST00000587201 PMFBP1Q8TBY8 1022 aa25.51■■□□□ 1.67
TPM4-206ENST00000587201 NGLY1Q96IV0 654 aa25.51■■□□□ 1.67
TPM4-206ENST00000587201 PSME1Q06323 249 aa25.5■■□□□ 1.67
TPM4-206ENST00000587201 USP32Q8NFA0 1604 aa25.49■■□□□ 1.67
TPM4-206ENST00000587201 SPATA31A3Q5VYP0 1347 aa25.49■■□□□ 1.67
TPM4-206ENST00000587201 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
TPM4-206ENST00000587201 PRR36Q9H6K5 1346 aa25.47■■□□□ 1.67
TPM4-206ENST00000587201 RXRBP28702 533 aa25.47■■□□□ 1.67
TPM4-206ENST00000587201 QTRT2Q9H974 415 aaKnown RBP25.44■■□□□ 1.66
TPM4-206ENST00000587201 LMOD2Q6P5Q4 547 aa25.43■■□□□ 1.66
TPM4-206ENST00000587201 TNS3Q68CZ2 1445 aa25.43■■□□□ 1.66
TPM4-206ENST00000587201 SBNO1A3KN83 1393 aa25.43■■□□□ 1.66
TPM4-206ENST00000587201 USP21Q9UK80 565 aa25.42■■□□□ 1.66
TPM4-206ENST00000587201 CDK19Q9BWU1 502 aa25.41■■□□□ 1.66
TPM4-206ENST00000587201 NGDNQ8NEJ9 315 aaKnown RBP25.4■■□□□ 1.66
TPM4-206ENST00000587201 NUDT16Q96DE0 195 aaKnown RBP25.4■■□□□ 1.66
TPM4-206ENST00000587201 GPRASP1Q5JY77 1395 aa25.4■■□□□ 1.66
TPM4-206ENST00000587201 HAP1P54257 671 aaPredicted RBP25.39■■□□□ 1.66
TPM4-206ENST00000587201 FNBP4Q8N3X1 1017 aaPredicted RBP25.39■■□□□ 1.66
TPM4-206ENST00000587201 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
TPM4-206ENST00000587201 PLEKHG5O94827 1062 aa25.38■■□□□ 1.65
TPM4-206ENST00000587201 RBM6P78332 1123 aaKnown RBP25.38■■□□□ 1.65
TPM4-206ENST00000587201 ATP7BP35670 1465 aa25.37■■□□□ 1.65
TPM4-206ENST00000587201 ARHGEF10O15013 1369 aa25.37■■□□□ 1.65
TPM4-206ENST00000587201 TRPM1Q7Z4N2 1603 aa25.35■■□□□ 1.65
TPM4-206ENST00000587201 CABLES1Q8TDN4 633 aa25.35■■□□□ 1.65
TPM4-206ENST00000587201 TRPC5Q9UL62 973 aaPredicted RBP25.35■■□□□ 1.65
TPM4-206ENST00000587201 MARF1Q9Y4F3 1742 aaKnown RBP25.34■■□□□ 1.65
TPM4-206ENST00000587201 CDK12Q9NYV4 1490 aaPredicted RBP25.34■■□□□ 1.65
TPM4-206ENST00000587201 ROCK2O75116 1388 aaKnown RBP25.34■■□□□ 1.65
TPM4-206ENST00000587201 ITSN1Q15811 1721 aa25.34■■□□□ 1.65
TPM4-206ENST00000587201 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
TPM4-206ENST00000587201 TONSLQ96HA7 1378 aa25.31■■□□□ 1.64
TPM4-206ENST00000587201 PAK3O75914 559 aaPredicted RBP25.31■■□□□ 1.64
TPM4-206ENST00000587201 SRPK2P78362 688 aaKnown RBP25.31■■□□□ 1.64
TPM4-206ENST00000587201 TRPM3Q9HCF6 1732 aaPredicted RBP25.31■■□□□ 1.64
TPM4-206ENST00000587201 NBPF8Q3BBV2 869 aa25.3■■□□□ 1.64
TPM4-206ENST00000587201 ATRNO75882 1429 aa25.29■■□□□ 1.64
TPM4-206ENST00000587201 QRICH2Q9H0J4 1663 aa25.29■■□□□ 1.64
TPM4-206ENST00000587201 RGS12O14924 1447 aa25.29■■□□□ 1.64
TPM4-206ENST00000587201 BCL9LQ86UU0 1499 aa25.28■■□□□ 1.64
TPM4-206ENST00000587201 CABP2Q9NPB3 220 aa25.27■■□□□ 1.64
TPM4-206ENST00000587201 ACEP12821 1306 aa25.27■■□□□ 1.64
TPM4-206ENST00000587201 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
TPM4-206ENST00000587201 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
TPM4-206ENST00000587201 PLEKHG3A1L390 1219 aa25.26■■□□□ 1.63
TPM4-206ENST00000587201 UNC5CLQ8IV45 518 aa25.25■■□□□ 1.63
TPM4-206ENST00000587201 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms