RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 TESK2Q96S53 571 aa17.83■□□□□ 0.44
DNMT1-208ENST00000586667 HSPA5P11021 654 aaKnown RBP17.82■□□□□ 0.44
DNMT1-208ENST00000586667 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
DNMT1-208ENST00000586667 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
DNMT1-208ENST00000586667 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
DNMT1-208ENST00000586667 FMN2Q9NZ56 1722 aa17.81■□□□□ 0.44
DNMT1-208ENST00000586667 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
DNMT1-208ENST00000586667 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
DNMT1-208ENST00000586667 DCCP43146 1447 aa17.79■□□□□ 0.44
DNMT1-208ENST00000586667 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
DNMT1-208ENST00000586667 SAFB2Q14151 953 aaKnown RBP eCLIP17.78■□□□□ 0.44
DNMT1-208ENST00000586667 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.44
DNMT1-208ENST00000586667 PROSER2Q86WR7 435 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-208ENST00000586667 POGKQ9P215 609 aa17.76■□□□□ 0.43
DNMT1-208ENST00000586667 ATP7BP35670 1465 aa17.75■□□□□ 0.43
DNMT1-208ENST00000586667 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
DNMT1-208ENST00000586667 MYOM1P52179 1685 aa17.75■□□□□ 0.43
DNMT1-208ENST00000586667 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
DNMT1-208ENST00000586667 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
DNMT1-208ENST00000586667 MST1RQ04912 1400 aa17.72■□□□□ 0.43
DNMT1-208ENST00000586667 C11orf95C9JLR9 678 aaPredicted RBP17.71■□□□□ 0.43
DNMT1-208ENST00000586667 MSH6P52701 1360 aa17.7■□□□□ 0.42
DNMT1-208ENST00000586667 ANKARQ7Z5J8 1434 aa17.7■□□□□ 0.42
DNMT1-208ENST00000586667 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
DNMT1-208ENST00000586667 RGPD8O14715 1765 aaPredicted RBP17.69■□□□□ 0.42
DNMT1-208ENST00000586667 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
DNMT1-208ENST00000586667 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
DNMT1-208ENST00000586667 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
DNMT1-208ENST00000586667 C1orf167Q5SNV9 1468 aa17.67■□□□□ 0.42
DNMT1-208ENST00000586667 EVC2Q86UK5 1308 aa17.67■□□□□ 0.42
DNMT1-208ENST00000586667 CDK19Q9BWU1 502 aa17.66■□□□□ 0.42
DNMT1-208ENST00000586667 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
DNMT1-208ENST00000586667 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
DNMT1-208ENST00000586667 C14orf37Q86TY3 774 aa17.65■□□□□ 0.42
DNMT1-208ENST00000586667 WASHC2AQ641Q2 1341 aa17.65■□□□□ 0.42
DNMT1-208ENST00000586667 TMF1P82094 1093 aa17.64■□□□□ 0.41
DNMT1-208ENST00000586667 CABP2Q9NPB3 220 aa17.64■□□□□ 0.41
DNMT1-208ENST00000586667 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
DNMT1-208ENST00000586667 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
DNMT1-208ENST00000586667 KIF1AQ12756 1690 aa17.63■□□□□ 0.41
DNMT1-208ENST00000586667 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
DNMT1-208ENST00000586667 CADPS2Q86UW7 1296 aa17.62■□□□□ 0.41
DNMT1-208ENST00000586667 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
DNMT1-208ENST00000586667 NRKQ7Z2Y5 1582 aa17.61■□□□□ 0.41
DNMT1-208ENST00000586667 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
DNMT1-208ENST00000586667 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
DNMT1-208ENST00000586667 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
DNMT1-208ENST00000586667 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
DNMT1-208ENST00000586667 PPIP5K1Q6PFW1 1433 aa17.6■□□□□ 0.41
DNMT1-208ENST00000586667 MON2Q7Z3U7 1717 aa17.6■□□□□ 0.41
DNMT1-208ENST00000586667 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
DNMT1-208ENST00000586667 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
DNMT1-208ENST00000586667 ATF3P18847 181 aa17.59■□□□□ 0.41
DNMT1-208ENST00000586667 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
DNMT1-208ENST00000586667 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-208ENST00000586667 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
DNMT1-208ENST00000586667 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
DNMT1-208ENST00000586667 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
DNMT1-208ENST00000586667 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
DNMT1-208ENST00000586667 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
DNMT1-208ENST00000586667 ORAI2Q96SN7 254 aa17.55■□□□□ 0.4
DNMT1-208ENST00000586667 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
DNMT1-208ENST00000586667 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
DNMT1-208ENST00000586667 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
DNMT1-208ENST00000586667 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
DNMT1-208ENST00000586667 BRINP3Q76B58 766 aa17.54■□□□□ 0.4
DNMT1-208ENST00000586667 PXDNQ92626 1479 aa17.54■□□□□ 0.4
DNMT1-208ENST00000586667 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
DNMT1-208ENST00000586667 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
DNMT1-208ENST00000586667 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
DNMT1-208ENST00000586667 CABP1Q9NZU7 370 aa17.52■□□□□ 0.4
DNMT1-208ENST00000586667 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
DNMT1-208ENST00000586667 USP6P35125 1406 aa17.51■□□□□ 0.39
DNMT1-208ENST00000586667 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
DNMT1-208ENST00000586667 ESCO1Q5FWF5 840 aa17.5■□□□□ 0.39
DNMT1-208ENST00000586667 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
DNMT1-208ENST00000586667 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
DNMT1-208ENST00000586667 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
DNMT1-208ENST00000586667 ALS2Q96Q42 1657 aa17.48■□□□□ 0.39
DNMT1-208ENST00000586667 ACEP12821 1306 aa17.48■□□□□ 0.39
DNMT1-208ENST00000586667 MARF1Q9Y4F3 1742 aaKnown RBP17.48■□□□□ 0.39
DNMT1-208ENST00000586667 PMFBP1Q8TBY8 1022 aa17.48■□□□□ 0.39
DNMT1-208ENST00000586667 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
DNMT1-208ENST00000586667 TOM1O60784 492 aa17.47■□□□□ 0.39
DNMT1-208ENST00000586667 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
DNMT1-208ENST00000586667 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
DNMT1-208ENST00000586667 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
DNMT1-208ENST00000586667 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
DNMT1-208ENST00000586667 EDC4Q6P2E9 1401 aaKnown RBP17.46■□□□□ 0.39
DNMT1-208ENST00000586667 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
DNMT1-208ENST00000586667 PHLPP1O60346 1717 aa17.45■□□□□ 0.38
DNMT1-208ENST00000586667 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
DNMT1-208ENST00000586667 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
DNMT1-208ENST00000586667 FOXO3O43524 673 aa17.44■□□□□ 0.38
DNMT1-208ENST00000586667 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
DNMT1-208ENST00000586667 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
DNMT1-208ENST00000586667 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
DNMT1-208ENST00000586667 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
DNMT1-208ENST00000586667 PIP4K2BP78356 416 aa17.42■□□□□ 0.38
DNMT1-208ENST00000586667 PANK3Q9H999 370 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms