RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
ERCC2-207ENST00000586441 STK26Q9P289 416 aa17.99■□□□□ 0.47
ERCC2-207ENST00000586441 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
ERCC2-207ENST00000586441 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
ERCC2-207ENST00000586441 SOCS7O14512 581 aa17.98■□□□□ 0.47
ERCC2-207ENST00000586441 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
ERCC2-207ENST00000586441 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
ERCC2-207ENST00000586441 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
ERCC2-207ENST00000586441 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
ERCC2-207ENST00000586441 ADGRB1O14514 1584 aa17.94■□□□□ 0.46
ERCC2-207ENST00000586441 SOS2Q07890 1332 aaPredicted RBP17.94■□□□□ 0.46
ERCC2-207ENST00000586441 ORAI2Q96SN7 254 aa17.93■□□□□ 0.46
ERCC2-207ENST00000586441 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
ERCC2-207ENST00000586441 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
ERCC2-207ENST00000586441 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
ERCC2-207ENST00000586441 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
ERCC2-207ENST00000586441 PRAM1Q96QH2 718 aa17.89■□□□□ 0.45
ERCC2-207ENST00000586441 POGKQ9P215 609 aa17.88■□□□□ 0.45
ERCC2-207ENST00000586441 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
ERCC2-207ENST00000586441 KIAA1210Q9ULL0 1709 aa17.88■□□□□ 0.45
ERCC2-207ENST00000586441 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
ERCC2-207ENST00000586441 DDX17Q92841 729 aaKnown RBP17.86■□□□□ 0.45
ERCC2-207ENST00000586441 ZNF772Q68DY9 489 aaPredicted RBP17.85■□□□□ 0.45
ERCC2-207ENST00000586441 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
ERCC2-207ENST00000586441 LRP6O75581 1613 aa17.84■□□□□ 0.45
ERCC2-207ENST00000586441 ADGRB2O60241 1585 aa17.84■□□□□ 0.45
ERCC2-207ENST00000586441 ANKARQ7Z5J8 1434 aa17.84■□□□□ 0.45
ERCC2-207ENST00000586441 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
ERCC2-207ENST00000586441 FOXO3O43524 673 aa17.83■□□□□ 0.44
ERCC2-207ENST00000586441 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.44
ERCC2-207ENST00000586441 KIF1AQ12756 1690 aa17.83■□□□□ 0.44
ERCC2-207ENST00000586441 POTEAQ6S8J7 498 aa17.82■□□□□ 0.44
ERCC2-207ENST00000586441 PXDNQ92626 1479 aa17.82■□□□□ 0.44
ERCC2-207ENST00000586441 PHF8Q9UPP1 1060 aa17.8■□□□□ 0.44
ERCC2-207ENST00000586441 COL22A1Q8NFW1 1626 aaPredicted RBP17.8■□□□□ 0.44
ERCC2-207ENST00000586441 NUTM2FA1L443 756 aa17.79■□□□□ 0.44
ERCC2-207ENST00000586441 NUTM2BA6NNL0 878 aaPredicted RBP17.79■□□□□ 0.44
ERCC2-207ENST00000586441 NUTM2EB1AL46 878 aaPredicted RBP17.79■□□□□ 0.44
ERCC2-207ENST00000586441 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
ERCC2-207ENST00000586441 PSME1Q06323 249 aa17.79■□□□□ 0.44
ERCC2-207ENST00000586441 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
ERCC2-207ENST00000586441 NUTM2AQ8IVF1 878 aaPredicted RBP17.79■□□□□ 0.44
ERCC2-207ENST00000586441 L3MBTL2Q969R5 705 aa17.79■□□□□ 0.44
ERCC2-207ENST00000586441 RGPD8O14715 1765 aaPredicted RBP17.78■□□□□ 0.44
ERCC2-207ENST00000586441 KRT28Q7Z3Y7 464 aa17.77■□□□□ 0.44
ERCC2-207ENST00000586441 ARHGEF28Q8N1W1 1705 aaKnown RBP17.77■□□□□ 0.44
ERCC2-207ENST00000586441 SPATA31A3Q5VYP0 1347 aa17.76■□□□□ 0.43
ERCC2-207ENST00000586441 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
ERCC2-207ENST00000586441 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
ERCC2-207ENST00000586441 NBPF1Q3BBV0 1214 aa17.75■□□□□ 0.43
ERCC2-207ENST00000586441 SBNO1A3KN83 1393 aa17.75■□□□□ 0.43
ERCC2-207ENST00000586441 TULP4Q9NRJ4 1543 aa17.74■□□□□ 0.43
ERCC2-207ENST00000586441 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
ERCC2-207ENST00000586441 AFF2P51816 1311 aa17.73■□□□□ 0.43
ERCC2-207ENST00000586441 USP32Q8NFA0 1604 aa17.73■□□□□ 0.43
ERCC2-207ENST00000586441 FNBP4Q8N3X1 1017 aaPredicted RBP17.72■□□□□ 0.43
ERCC2-207ENST00000586441 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
ERCC2-207ENST00000586441 HIRIP3Q9BW71 556 aaPredicted RBP17.72■□□□□ 0.43
ERCC2-207ENST00000586441 RXRBP28702 533 aa17.71■□□□□ 0.43
ERCC2-207ENST00000586441 XPCQ01831 940 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-207ENST00000586441 NEUROD1Q13562 356 aa17.71■□□□□ 0.43
ERCC2-207ENST00000586441 C8orf37Q96NL8 207 aa17.71■□□□□ 0.43
ERCC2-207ENST00000586441 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.42
ERCC2-207ENST00000586441 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
ERCC2-207ENST00000586441 ARHGEF10O15013 1369 aa17.7■□□□□ 0.42
ERCC2-207ENST00000586441 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
ERCC2-207ENST00000586441 ADAMTS2O95450 1211 aa17.69■□□□□ 0.42
ERCC2-207ENST00000586441 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
ERCC2-207ENST00000586441 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
ERCC2-207ENST00000586441 TNS3Q68CZ2 1445 aa17.69■□□□□ 0.42
ERCC2-207ENST00000586441 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
ERCC2-207ENST00000586441 NUDT16Q96DE0 195 aaKnown RBP17.68■□□□□ 0.42
ERCC2-207ENST00000586441 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
ERCC2-207ENST00000586441 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
ERCC2-207ENST00000586441 MARF1Q9Y4F3 1742 aaKnown RBP17.67■□□□□ 0.42
ERCC2-207ENST00000586441 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
ERCC2-207ENST00000586441 QTRT2Q9H974 415 aaKnown RBP17.67■□□□□ 0.42
ERCC2-207ENST00000586441 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
ERCC2-207ENST00000586441 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
ERCC2-207ENST00000586441 ATP7BP35670 1465 aa17.66■□□□□ 0.42
ERCC2-207ENST00000586441 NGDNQ8NEJ9 315 aaKnown RBP17.65■□□□□ 0.42
ERCC2-207ENST00000586441 USP21Q9UK80 565 aa17.65■□□□□ 0.42
ERCC2-207ENST00000586441 TRPC5Q9UL62 973 aaPredicted RBP17.65■□□□□ 0.42
ERCC2-207ENST00000586441 POLR3AO14802 1390 aaPredicted RBP17.64■□□□□ 0.41
ERCC2-207ENST00000586441 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
ERCC2-207ENST00000586441 TRPM3Q9HCF6 1732 aaPredicted RBP17.63■□□□□ 0.41
ERCC2-207ENST00000586441 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
ERCC2-207ENST00000586441 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
ERCC2-207ENST00000586441 BRD4O60885 1362 aaPredicted RBP17.61■□□□□ 0.41
ERCC2-207ENST00000586441 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
ERCC2-207ENST00000586441 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
ERCC2-207ENST00000586441 ATRNO75882 1429 aa17.6■□□□□ 0.41
ERCC2-207ENST00000586441 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
ERCC2-207ENST00000586441 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
ERCC2-207ENST00000586441 SLIT2O94813 1529 aa17.59■□□□□ 0.41
ERCC2-207ENST00000586441 EVC2Q86UK5 1308 aa17.59■□□□□ 0.41
ERCC2-207ENST00000586441 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
ERCC2-207ENST00000586441 SRPK2P78362 688 aaKnown RBP17.59■□□□□ 0.41
ERCC2-207ENST00000586441 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
ERCC2-207ENST00000586441 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms