RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
RETREG3-203ENST00000585894 ATF3P18847 181 aa18.06■□□□□ 0.48
RETREG3-203ENST00000585894 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
RETREG3-203ENST00000585894 POGKQ9P215 609 aa18.06■□□□□ 0.48
RETREG3-203ENST00000585894 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
RETREG3-203ENST00000585894 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
RETREG3-203ENST00000585894 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
RETREG3-203ENST00000585894 SLAIN2Q9P270 581 aa18.04■□□□□ 0.48
RETREG3-203ENST00000585894 DCCP43146 1447 aa18.04■□□□□ 0.48
RETREG3-203ENST00000585894 CDC42BPGQ6DT37 1551 aa18.04■□□□□ 0.48
RETREG3-203ENST00000585894 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
RETREG3-203ENST00000585894 MST1RQ04912 1400 aa18.03■□□□□ 0.48
RETREG3-203ENST00000585894 MINK1Q8N4C8 1332 aaPredicted RBP18.03■□□□□ 0.48
RETREG3-203ENST00000585894 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
RETREG3-203ENST00000585894 FMN2Q9NZ56 1722 aa18.02■□□□□ 0.47
RETREG3-203ENST00000585894 QRICH2Q9H0J4 1663 aa18.02■□□□□ 0.47
RETREG3-203ENST00000585894 RGPD8O14715 1765 aaPredicted RBP18.01■□□□□ 0.47
RETREG3-203ENST00000585894 GPRASP1Q5JY77 1395 aa18■□□□□ 0.47
RETREG3-203ENST00000585894 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
RETREG3-203ENST00000585894 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
RETREG3-203ENST00000585894 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
RETREG3-203ENST00000585894 C1orf167Q5SNV9 1468 aa17.98■□□□□ 0.47
RETREG3-203ENST00000585894 HSPA1LP34931 641 aa17.98■□□□□ 0.47
RETREG3-203ENST00000585894 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
RETREG3-203ENST00000585894 BRINP3Q76B58 766 aa17.96■□□□□ 0.47
RETREG3-203ENST00000585894 USP32Q8NFA0 1604 aa17.96■□□□□ 0.47
RETREG3-203ENST00000585894 ORAI2Q96SN7 254 aa17.95■□□□□ 0.46
RETREG3-203ENST00000585894 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
RETREG3-203ENST00000585894 DDX17Q92841 729 aaKnown RBP17.93■□□□□ 0.46
RETREG3-203ENST00000585894 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
RETREG3-203ENST00000585894 EIF3AQ14152 1382 aaKnown RBP17.92■□□□□ 0.46
RETREG3-203ENST00000585894 WASLO00401 505 aaPredicted RBP17.91■□□□□ 0.46
RETREG3-203ENST00000585894 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
RETREG3-203ENST00000585894 TULP4Q9NRJ4 1543 aa17.91■□□□□ 0.46
RETREG3-203ENST00000585894 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
RETREG3-203ENST00000585894 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
RETREG3-203ENST00000585894 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
RETREG3-203ENST00000585894 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
RETREG3-203ENST00000585894 ATP7BP35670 1465 aa17.87■□□□□ 0.45
RETREG3-203ENST00000585894 USP47Q96K76 1375 aa17.87■□□□□ 0.45
RETREG3-203ENST00000585894 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
RETREG3-203ENST00000585894 ANKARQ7Z5J8 1434 aa17.86■□□□□ 0.45
RETREG3-203ENST00000585894 ITSN1Q15811 1721 aa17.86■□□□□ 0.45
RETREG3-203ENST00000585894 TOPAZ1Q8N9V7 1692 aa17.86■□□□□ 0.45
RETREG3-203ENST00000585894 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
RETREG3-203ENST00000585894 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
RETREG3-203ENST00000585894 CABP2Q9NPB3 220 aa17.86■□□□□ 0.45
RETREG3-203ENST00000585894 PMFBP1Q8TBY8 1022 aa17.85■□□□□ 0.45
RETREG3-203ENST00000585894 FOXO3O43524 673 aa17.84■□□□□ 0.45
RETREG3-203ENST00000585894 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
RETREG3-203ENST00000585894 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
RETREG3-203ENST00000585894 PHF8Q9UPP1 1060 aa17.84■□□□□ 0.45
RETREG3-203ENST00000585894 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
RETREG3-203ENST00000585894 PXDNQ92626 1479 aa17.81■□□□□ 0.44
RETREG3-203ENST00000585894 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
RETREG3-203ENST00000585894 TESK2Q96S53 571 aa17.81■□□□□ 0.44
RETREG3-203ENST00000585894 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
RETREG3-203ENST00000585894 SOS2Q07890 1332 aaPredicted RBP17.78■□□□□ 0.44
RETREG3-203ENST00000585894 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
RETREG3-203ENST00000585894 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
RETREG3-203ENST00000585894 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
RETREG3-203ENST00000585894 DISP3Q9P2K9 1392 aa17.76■□□□□ 0.43
RETREG3-203ENST00000585894 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-203ENST00000585894 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
RETREG3-203ENST00000585894 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
RETREG3-203ENST00000585894 JCADQ9P266 1359 aa17.75■□□□□ 0.43
RETREG3-203ENST00000585894 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
RETREG3-203ENST00000585894 CABP1Q9NZU7 370 aa17.75■□□□□ 0.43
RETREG3-203ENST00000585894 PSME1Q06323 249 aa17.74■□□□□ 0.43
RETREG3-203ENST00000585894 ACEP12821 1306 aa17.74■□□□□ 0.43
RETREG3-203ENST00000585894 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
RETREG3-203ENST00000585894 PNPLA6Q8IY17 1366 aa17.73■□□□□ 0.43
RETREG3-203ENST00000585894 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
RETREG3-203ENST00000585894 MED1Q15648 1581 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-203ENST00000585894 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
RETREG3-203ENST00000585894 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
RETREG3-203ENST00000585894 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-203ENST00000585894 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
RETREG3-203ENST00000585894 LRP6O75581 1613 aa17.71■□□□□ 0.42
RETREG3-203ENST00000585894 ATAD2Q6PL18 1390 aa17.7■□□□□ 0.42
RETREG3-203ENST00000585894 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
RETREG3-203ENST00000585894 SPATA31A3Q5VYP0 1347 aa17.7■□□□□ 0.42
RETREG3-203ENST00000585894 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-203ENST00000585894 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-203ENST00000585894 TMF1P82094 1093 aa17.69■□□□□ 0.42
RETREG3-203ENST00000585894 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-203ENST00000585894 ALS2Q96Q42 1657 aa17.69■□□□□ 0.42
RETREG3-203ENST00000585894 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-203ENST00000585894 LMOD2Q6P5Q4 547 aa17.69■□□□□ 0.42
RETREG3-203ENST00000585894 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
RETREG3-203ENST00000585894 PAK3O75914 559 aaPredicted RBP17.68■□□□□ 0.42
RETREG3-203ENST00000585894 SLC12A5Q9H2X9 1139 aa17.67■□□□□ 0.42
RETREG3-203ENST00000585894 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
RETREG3-203ENST00000585894 CD163L1Q9NR16 1453 aa17.67■□□□□ 0.42
RETREG3-203ENST00000585894 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
RETREG3-203ENST00000585894 MYOM1P52179 1685 aa17.66■□□□□ 0.42
RETREG3-203ENST00000585894 ABCA3Q99758 1704 aa17.66■□□□□ 0.42
RETREG3-203ENST00000585894 SPATA31A6Q5VVP1 1343 aa17.65■□□□□ 0.42
RETREG3-203ENST00000585894 USP6P35125 1406 aa17.65■□□□□ 0.42
RETREG3-203ENST00000585894 CABLES1Q8TDN4 633 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms