RNA–Protein interactions for RNA: ENST00000585855.2

TCF3-206, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,170 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-206ENST00000585855 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
TCF3-206ENST00000585855 C14orf37Q86TY3 774 aa27.97■■■□□ 2.07
TCF3-206ENST00000585855 ADGRL3Q9HAR2 1447 aa27.97■■■□□ 2.07
TCF3-206ENST00000585855 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
TCF3-206ENST00000585855 XIRP1Q702N8 1843 aaKnown RBP27.97■■■□□ 2.07
TCF3-206ENST00000585855 ADGRB2O60241 1585 aa27.96■■■□□ 2.07
TCF3-206ENST00000585855 SLC24A1O60721 1099 aa27.96■■■□□ 2.07
TCF3-206ENST00000585855 MINK1Q8N4C8 1332 aaPredicted RBP27.95■■■□□ 2.07
TCF3-206ENST00000585855 RBM33Q96EV2 1170 aaKnown RBP27.95■■■□□ 2.06
TCF3-206ENST00000585855 TESK2Q96S53 571 aa27.93■■■□□ 2.06
TCF3-206ENST00000585855 CDC42BPGQ6DT37 1551 aa27.91■■■□□ 2.06
TCF3-206ENST00000585855 HIRIP3Q9BW71 556 aaPredicted RBP27.9■■■□□ 2.06
TCF3-206ENST00000585855 MSH6P52701 1360 aa27.89■■■□□ 2.06
TCF3-206ENST00000585855 C19orf44Q9H6X5 657 aa27.89■■■□□ 2.06
TCF3-206ENST00000585855 EVC2Q86UK5 1308 aa27.89■■■□□ 2.05
TCF3-206ENST00000585855 DCCP43146 1447 aa27.88■■■□□ 2.05
TCF3-206ENST00000585855 TULP4Q9NRJ4 1543 aa27.87■■■□□ 2.05
TCF3-206ENST00000585855 TMF1P82094 1093 aa27.87■■■□□ 2.05
TCF3-206ENST00000585855 WASLO00401 505 aaPredicted RBP27.84■■■□□ 2.05
TCF3-206ENST00000585855 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
TCF3-206ENST00000585855 IQSEC2Q5JU85 1478 aa27.83■■■□□ 2.04
TCF3-206ENST00000585855 ATF3P18847 181 aa27.82■■■□□ 2.04
TCF3-206ENST00000585855 CDCA8Q53HL2 280 aa27.82■■■□□ 2.04
TCF3-206ENST00000585855 DISP3Q9P2K9 1392 aa27.82■■■□□ 2.04
TCF3-206ENST00000585855 CDK19Q9BWU1 502 aa27.81■■■□□ 2.04
TCF3-206ENST00000585855 SRPK2P78362 688 aaKnown RBP27.8■■■□□ 2.04
TCF3-206ENST00000585855 CADPS2Q86UW7 1296 aa27.8■■■□□ 2.04
TCF3-206ENST00000585855 PUS7Q96PZ0 661 aaKnown RBP27.77■■■□□ 2.04
TCF3-206ENST00000585855 ANKARQ7Z5J8 1434 aa27.76■■■□□ 2.04
TCF3-206ENST00000585855 CERKQ8TCT0 537 aa27.76■■■□□ 2.03
TCF3-206ENST00000585855 CABP2Q9NPB3 220 aa27.75■■■□□ 2.03
TCF3-206ENST00000585855 ATAD2Q6PL18 1390 aa27.74■■■□□ 2.03
TCF3-206ENST00000585855 ITSN1Q15811 1721 aa27.73■■■□□ 2.03
TCF3-206ENST00000585855 ATP7BP35670 1465 aa27.73■■■□□ 2.03
TCF3-206ENST00000585855 USP32Q8NFA0 1604 aa27.73■■■□□ 2.03
TCF3-206ENST00000585855 MST1RQ04912 1400 aa27.72■■■□□ 2.03
TCF3-206ENST00000585855 NUTM2FA1L443 756 aa27.71■■■□□ 2.03
TCF3-206ENST00000585855 C11orf95C9JLR9 678 aaPredicted RBP27.71■■■□□ 2.03
TCF3-206ENST00000585855 NUDT16Q96DE0 195 aaKnown RBP27.71■■■□□ 2.03
TCF3-206ENST00000585855 KIF7Q2M1P5 1343 aa27.7■■■□□ 2.03
TCF3-206ENST00000585855 ZNF316A6NFI3 1004 aaPredicted RBP27.7■■■□□ 2.02
TCF3-206ENST00000585855 CCDC7Q96M83 1385 aa27.7■■■□□ 2.02
TCF3-206ENST00000585855 PRR36Q9H6K5 1346 aa27.69■■■□□ 2.02
TCF3-206ENST00000585855 TOPAZ1Q8N9V7 1692 aa27.69■■■□□ 2.02
TCF3-206ENST00000585855 RGPD8O14715 1765 aaPredicted RBP27.69■■■□□ 2.02
TCF3-206ENST00000585855 POLR3GLQ9BT43 218 aa27.69■■■□□ 2.02
TCF3-206ENST00000585855 C1orf167Q5SNV9 1468 aa27.69■■■□□ 2.02
TCF3-206ENST00000585855 CCDC61Q9Y6R9 512 aa27.67■■■□□ 2.02
TCF3-206ENST00000585855 WASHC2AQ641Q2 1341 aa27.67■■■□□ 2.02
TCF3-206ENST00000585855 NINLQ9Y2I6 1382 aa27.66■■■□□ 2.02
TCF3-206ENST00000585855 SLAIN2Q9P270 581 aa27.66■■■□□ 2.02
TCF3-206ENST00000585855 TOM1O60784 492 aa27.64■■■□□ 2.02
TCF3-206ENST00000585855 PPIP5K1Q6PFW1 1433 aa27.64■■■□□ 2.02
TCF3-206ENST00000585855 MYOM1P52179 1685 aa27.63■■■□□ 2.01
TCF3-206ENST00000585855 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
TCF3-206ENST00000585855 TMC1Q8TDI8 760 aa27.62■■■□□ 2.01
TCF3-206ENST00000585855 ESCO1Q5FWF5 840 aa27.61■■■□□ 2.01
TCF3-206ENST00000585855 UBAP1LF5GYI3 381 aa27.6■■■□□ 2.01
TCF3-206ENST00000585855 CABP1Q9NZU7 370 aa27.59■■■□□ 2.01
TCF3-206ENST00000585855 PLEKHG3A1L390 1219 aa27.58■■■□□ 2.01
TCF3-206ENST00000585855 ORAI2Q96SN7 254 aa27.58■■■□□ 2.01
TCF3-206ENST00000585855 PHF8Q9UPP1 1060 aa27.58■■■□□ 2.01
TCF3-206ENST00000585855 SLC12A5Q9H2X9 1139 aa27.56■■■□□ 2
TCF3-206ENST00000585855 BRINP3Q76B58 766 aa27.54■■■□□ 2
TCF3-206ENST00000585855 PMFBP1Q8TBY8 1022 aa27.54■■■□□ 2
TCF3-206ENST00000585855 TERF2IPQ9NYB0 399 aa27.54■■■□□ 2
TCF3-206ENST00000585855 ROBO1Q9Y6N7 1651 aa27.54■■■□□ 2
TCF3-206ENST00000585855 POLR3AO14802 1390 aaPredicted RBP27.53■■■□□ 2
TCF3-206ENST00000585855 NGDNQ8NEJ9 315 aaKnown RBP27.53■■■□□ 2
TCF3-206ENST00000585855 HDGFL2Q7Z4V5 671 aaPredicted RBP27.52■■■□□ 2
TCF3-206ENST00000585855 AKAP12Q02952 1782 aa27.52■■■□□ 2
TCF3-206ENST00000585855 ANKRD36BQ8N2N9 1353 aa27.51■■□□□ 1.99
TCF3-206ENST00000585855 ACEP12821 1306 aa27.51■■□□□ 1.99
TCF3-206ENST00000585855 CD163L1Q9NR16 1453 aa27.5■■□□□ 1.99
TCF3-206ENST00000585855 CPSF1Q10570 1443 aaKnown RBP27.5■■□□□ 1.99
TCF3-206ENST00000585855 PIP4K2BP78356 416 aa27.49■■□□□ 1.99
TCF3-206ENST00000585855 A0A1W2PP64 1363 aa27.48■■□□□ 1.99
TCF3-206ENST00000585855 SCAF1Q9H7N4 1312 aaKnown RBP27.48■■□□□ 1.99
TCF3-206ENST00000585855 ZNF692Q9BU19 519 aaPredicted RBP27.48■■□□□ 1.99
TCF3-206ENST00000585855 MON2Q7Z3U7 1717 aa27.47■■□□□ 1.99
TCF3-206ENST00000585855 NPHP3Q7Z494 1330 aa27.47■■□□□ 1.99
TCF3-206ENST00000585855 FOXO3O43524 673 aa27.47■■□□□ 1.99
TCF3-206ENST00000585855 NHSL1Q5SYE7 1610 aa27.47■■□□□ 1.99
TCF3-206ENST00000585855 KTN1Q86UP2 1357 aaKnown RBP27.47■■□□□ 1.99
TCF3-206ENST00000585855 PSME1Q06323 249 aa27.45■■□□□ 1.98
TCF3-206ENST00000585855 PANK3Q9H999 370 aa27.45■■□□□ 1.98
TCF3-206ENST00000585855 USP6P35125 1406 aa27.44■■□□□ 1.98
TCF3-206ENST00000585855 AHDC1Q5TGY3 1603 aaPredicted RBP27.43■■□□□ 1.98
TCF3-206ENST00000585855 BRD4O60885 1362 aaPredicted RBP27.43■■□□□ 1.98
TCF3-206ENST00000585855 DDX10Q13206 875 aaKnown RBP27.42■■□□□ 1.98
TCF3-206ENST00000585855 EDC4Q6P2E9 1401 aaKnown RBP27.41■■□□□ 1.98
TCF3-206ENST00000585855 NRKQ7Z2Y5 1582 aa27.4■■□□□ 1.98
TCF3-206ENST00000585855 PXDNQ92626 1479 aa27.4■■□□□ 1.98
TCF3-206ENST00000585855 KRT28Q7Z3Y7 464 aa27.39■■□□□ 1.98
TCF3-206ENST00000585855 ILDR1Q86SU0 546 aaPredicted RBP27.39■■□□□ 1.98
TCF3-206ENST00000585855 NSD3Q9BZ95 1437 aa27.39■■□□□ 1.97
TCF3-206ENST00000585855 DDX17Q92841 729 aaKnown RBP27.38■■□□□ 1.97
TCF3-206ENST00000585855 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
TCF3-206ENST00000585855 XPCQ01831 940 aaPredicted RBP27.37■■□□□ 1.97
TCF3-206ENST00000585855 CARD14Q9BXL6 1004 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms