RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SPATA31A6Q5VVP1 1343 aa31.38■■■□□ 2.61
PPP4R1-228ENST00000584074 DHX57Q6P158 1386 aaKnown RBP31.37■■■□□ 2.61
PPP4R1-228ENST00000584074 KNDC1Q76NI1 1749 aa31.37■■■□□ 2.61
PPP4R1-228ENST00000584074 LAMC1P11047 1609 aa31.36■■■□□ 2.61
PPP4R1-228ENST00000584074 CDC42BPGQ6DT37 1551 aa31.36■■■□□ 2.61
PPP4R1-228ENST00000584074 SHPRHQ149N8 1683 aa31.35■■■□□ 2.61
PPP4R1-228ENST00000584074 LRP6O75581 1613 aa31.35■■■□□ 2.61
PPP4R1-228ENST00000584074 SIRT1Q96EB6 747 aa31.34■■■□□ 2.61
PPP4R1-228ENST00000584074 LRRC59Q96AG4 307 aaKnown RBP31.33■■■□□ 2.61
PPP4R1-228ENST00000584074 NUTM2FA1L443 756 aa31.3■■■□□ 2.6
PPP4R1-228ENST00000584074 POTEAQ6S8J7 498 aa31.3■■■□□ 2.6
PPP4R1-228ENST00000584074 NUTM2BA6NNL0 878 aaPredicted RBP31.29■■■□□ 2.6
PPP4R1-228ENST00000584074 NUTM2EB1AL46 878 aaPredicted RBP31.29■■■□□ 2.6
PPP4R1-228ENST00000584074 ESCO1Q5FWF5 840 aa31.29■■■□□ 2.6
PPP4R1-228ENST00000584074 NUTM2AQ8IVF1 878 aaPredicted RBP31.29■■■□□ 2.6
PPP4R1-228ENST00000584074 STAC3Q96MF2 364 aa31.29■■■□□ 2.6
PPP4R1-228ENST00000584074 MEX3CQ5U5Q3 659 aaKnown RBP31.28■■■□□ 2.6
PPP4R1-228ENST00000584074 PRAM1Q96QH2 718 aa31.28■■■□□ 2.6
PPP4R1-228ENST00000584074 ADGRB1O14514 1584 aa31.27■■■□□ 2.6
PPP4R1-228ENST00000584074 SAFB2Q14151 953 aaKnown RBP eCLIP31.26■■■□□ 2.59
PPP4R1-228ENST00000584074 SOS2Q07890 1332 aaPredicted RBP31.25■■■□□ 2.59
PPP4R1-228ENST00000584074 PNPLA6Q8IY17 1366 aa31.25■■■□□ 2.59
PPP4R1-228ENST00000584074 TRAK1Q9UPV9 953 aa31.23■■■□□ 2.59
PPP4R1-228ENST00000584074 POGKQ9P215 609 aa31.22■■■□□ 2.59
PPP4R1-228ENST00000584074 DLC1Q96QB1 1528 aa31.21■■■□□ 2.59
PPP4R1-228ENST00000584074 FOXO3O43524 673 aa31.19■■■□□ 2.58
PPP4R1-228ENST00000584074 NPHP3Q7Z494 1330 aa31.19■■■□□ 2.58
PPP4R1-228ENST00000584074 FMN2Q9NZ56 1722 aa31.18■■■□□ 2.58
PPP4R1-228ENST00000584074 XPCQ01831 940 aaPredicted RBP31.16■■■□□ 2.58
PPP4R1-228ENST00000584074 PXDNQ92626 1479 aa31.14■■■□□ 2.57
PPP4R1-228ENST00000584074 ZNF772Q68DY9 489 aaPredicted RBP31.11■■■□□ 2.57
PPP4R1-228ENST00000584074 HIRIP3Q9BW71 556 aaPredicted RBP31.11■■■□□ 2.57
PPP4R1-228ENST00000584074 MINK1Q8N4C8 1332 aaPredicted RBP31.09■■■□□ 2.57
PPP4R1-228ENST00000584074 C8orf37Q96NL8 207 aa31.09■■■□□ 2.57
PPP4R1-228ENST00000584074 ADAMTS2O95450 1211 aa31.08■■■□□ 2.57
PPP4R1-228ENST00000584074 SIN3AQ96ST3 1273 aa31.08■■■□□ 2.57
PPP4R1-228ENST00000584074 AFF2P51816 1311 aa31.07■■■□□ 2.56
PPP4R1-228ENST00000584074 PHF8Q9UPP1 1060 aa31.07■■■□□ 2.56
PPP4R1-228ENST00000584074 ADGRB2O60241 1585 aa31.06■■■□□ 2.56
PPP4R1-228ENST00000584074 KIF1AQ12756 1690 aa31.04■■■□□ 2.56
PPP4R1-228ENST00000584074 NBPF1Q3BBV0 1214 aa31.03■■■□□ 2.56
PPP4R1-228ENST00000584074 KRT28Q7Z3Y7 464 aa31.03■■■□□ 2.56
PPP4R1-228ENST00000584074 L3MBTL2Q969R5 705 aa31.03■■■□□ 2.56
PPP4R1-228ENST00000584074 RGPD8O14715 1765 aaPredicted RBP31.02■■■□□ 2.56
PPP4R1-228ENST00000584074 COL22A1Q8NFW1 1626 aaPredicted RBP31.02■■■□□ 2.56
PPP4R1-228ENST00000584074 ANKARQ7Z5J8 1434 aa31.01■■■□□ 2.55
PPP4R1-228ENST00000584074 NEUROD1Q13562 356 aa31.01■■■□□ 2.55
PPP4R1-228ENST00000584074 USP32Q8NFA0 1604 aa31■■■□□ 2.55
PPP4R1-228ENST00000584074 WASLO00401 505 aaPredicted RBP31■■■□□ 2.55
PPP4R1-228ENST00000584074 NGLY1Q96IV0 654 aa31■■■□□ 2.55
PPP4R1-228ENST00000584074 SPATA31A3Q5VYP0 1347 aa30.99■■■□□ 2.55
PPP4R1-228ENST00000584074 KIAA1210Q9ULL0 1709 aa30.99■■■□□ 2.55
PPP4R1-228ENST00000584074 PMFBP1Q8TBY8 1022 aa30.99■■■□□ 2.55
PPP4R1-228ENST00000584074 ARHGEF28Q8N1W1 1705 aaKnown RBP30.98■■■□□ 2.55
PPP4R1-228ENST00000584074 PRR36Q9H6K5 1346 aa30.98■■■□□ 2.55
PPP4R1-228ENST00000584074 TRIM26Q12899 539 aaPredicted RBP30.96■■■□□ 2.55
PPP4R1-228ENST00000584074 RXRBP28702 533 aa30.95■■■□□ 2.55
PPP4R1-228ENST00000584074 PSME1Q06323 249 aa30.95■■■□□ 2.55
PPP4R1-228ENST00000584074 EIF3AQ14152 1382 aaKnown RBP30.94■■■□□ 2.54
PPP4R1-228ENST00000584074 TULP4Q9NRJ4 1543 aa30.93■■■□□ 2.54
PPP4R1-228ENST00000584074 QTRT2Q9H974 415 aaKnown RBP30.92■■■□□ 2.54
PPP4R1-228ENST00000584074 TNS3Q68CZ2 1445 aa30.9■■■□□ 2.54
PPP4R1-228ENST00000584074 FNBP4Q8N3X1 1017 aaPredicted RBP30.89■■■□□ 2.54
PPP4R1-228ENST00000584074 USP21Q9UK80 565 aa30.89■■■□□ 2.54
PPP4R1-228ENST00000584074 SBNO1A3KN83 1393 aa30.89■■■□□ 2.54
PPP4R1-228ENST00000584074 LMOD2Q6P5Q4 547 aa30.87■■■□□ 2.53
PPP4R1-228ENST00000584074 CDK19Q9BWU1 502 aa30.87■■■□□ 2.53
PPP4R1-228ENST00000584074 NUDT16Q96DE0 195 aaKnown RBP30.86■■■□□ 2.53
PPP4R1-228ENST00000584074 PLEKHG5O94827 1062 aa30.85■■■□□ 2.53
PPP4R1-228ENST00000584074 ATP7BP35670 1465 aa30.84■■■□□ 2.53
PPP4R1-228ENST00000584074 RBM6P78332 1123 aaKnown RBP30.84■■■□□ 2.53
PPP4R1-228ENST00000584074 CABLES1Q8TDN4 633 aa30.84■■■□□ 2.53
PPP4R1-228ENST00000584074 GPRASP1Q5JY77 1395 aa30.83■■■□□ 2.53
PPP4R1-228ENST00000584074 NGDNQ8NEJ9 315 aaKnown RBP30.83■■■□□ 2.53
PPP4R1-228ENST00000584074 CDK12Q9NYV4 1490 aaPredicted RBP30.82■■■□□ 2.52
PPP4R1-228ENST00000584074 ARHGEF10O15013 1369 aa30.81■■■□□ 2.52
PPP4R1-228ENST00000584074 CENPJQ9HC77 1338 aaPredicted RBP30.81■■■□□ 2.52
PPP4R1-228ENST00000584074 HAP1P54257 671 aaPredicted RBP30.79■■■□□ 2.52
PPP4R1-228ENST00000584074 TRPC5Q9UL62 973 aaPredicted RBP30.79■■■□□ 2.52
PPP4R1-228ENST00000584074 BCL9LQ86UU0 1499 aa30.78■■■□□ 2.52
PPP4R1-228ENST00000584074 TRPM1Q7Z4N2 1603 aa30.78■■■□□ 2.52
PPP4R1-228ENST00000584074 MARF1Q9Y4F3 1742 aaKnown RBP30.78■■■□□ 2.52
PPP4R1-228ENST00000584074 TRPM3Q9HCF6 1732 aaPredicted RBP30.77■■■□□ 2.52
PPP4R1-228ENST00000584074 RGS12O14924 1447 aa30.76■■■□□ 2.51
PPP4R1-228ENST00000584074 NBPF8Q3BBV2 869 aa30.76■■■□□ 2.51
PPP4R1-228ENST00000584074 ATRNO75882 1429 aa30.75■■■□□ 2.51
PPP4R1-228ENST00000584074 CCDC61Q9Y6R9 512 aa30.75■■■□□ 2.51
PPP4R1-228ENST00000584074 ROCK2O75116 1388 aaKnown RBP30.75■■■□□ 2.51
PPP4R1-228ENST00000584074 ITSN1Q15811 1721 aa30.73■■■□□ 2.51
PPP4R1-228ENST00000584074 PAK3O75914 559 aaPredicted RBP30.73■■■□□ 2.51
PPP4R1-228ENST00000584074 SRPK2P78362 688 aaKnown RBP30.72■■■□□ 2.51
PPP4R1-228ENST00000584074 CABP2Q9NPB3 220 aa30.71■■■□□ 2.51
PPP4R1-228ENST00000584074 SLIT2O94813 1529 aa30.71■■■□□ 2.51
PPP4R1-228ENST00000584074 ALS2Q96Q42 1657 aa30.7■■■□□ 2.5
PPP4R1-228ENST00000584074 ACEP12821 1306 aa30.7■■■□□ 2.5
PPP4R1-228ENST00000584074 QRICH2Q9H0J4 1663 aa30.69■■■□□ 2.5
PPP4R1-228ENST00000584074 PLEKHG3A1L390 1219 aa30.69■■■□□ 2.5
PPP4R1-228ENST00000584074 UNC5CLQ8IV45 518 aa30.69■■■□□ 2.5
PPP4R1-228ENST00000584074 TOPAZ1Q8N9V7 1692 aa30.68■■■□□ 2.5
PPP4R1-228ENST00000584074 POLR3AO14802 1390 aaPredicted RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms