RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 NHSL1Q5SYE7 1610 aa18.08■□□□□ 0.48
SMARCD2-209ENST00000581832 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.48
SMARCD2-209ENST00000581832 DLC1Q96QB1 1528 aa18.06■□□□□ 0.48
SMARCD2-209ENST00000581832 JCADQ9P266 1359 aa18.05■□□□□ 0.48
SMARCD2-209ENST00000581832 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
SMARCD2-209ENST00000581832 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
SMARCD2-209ENST00000581832 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
SMARCD2-209ENST00000581832 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.48
SMARCD2-209ENST00000581832 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
SMARCD2-209ENST00000581832 SHPRHQ149N8 1683 aa18.01■□□□□ 0.47
SMARCD2-209ENST00000581832 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
SMARCD2-209ENST00000581832 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
SMARCD2-209ENST00000581832 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
SMARCD2-209ENST00000581832 TRAK1Q9UPV9 953 aa17.99■□□□□ 0.47
SMARCD2-209ENST00000581832 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
SMARCD2-209ENST00000581832 RGPD8O14715 1765 aaPredicted RBP17.98■□□□□ 0.47
SMARCD2-209ENST00000581832 LRRC59Q96AG4 307 aaKnown RBP17.97■□□□□ 0.47
SMARCD2-209ENST00000581832 LRP6O75581 1613 aa17.97■□□□□ 0.47
SMARCD2-209ENST00000581832 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
SMARCD2-209ENST00000581832 ARHGEF28Q8N1W1 1705 aaKnown RBP17.96■□□□□ 0.47
SMARCD2-209ENST00000581832 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
SMARCD2-209ENST00000581832 SAFB2Q14151 953 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMARCD2-209ENST00000581832 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
SMARCD2-209ENST00000581832 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.47
SMARCD2-209ENST00000581832 ADGRB2O60241 1585 aa17.96■□□□□ 0.46
SMARCD2-209ENST00000581832 POGKQ9P215 609 aa17.94■□□□□ 0.46
SMARCD2-209ENST00000581832 PNPLA6Q8IY17 1366 aa17.93■□□□□ 0.46
SMARCD2-209ENST00000581832 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
SMARCD2-209ENST00000581832 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
SMARCD2-209ENST00000581832 USP32Q8NFA0 1604 aa17.93■□□□□ 0.46
SMARCD2-209ENST00000581832 PXDNQ92626 1479 aa17.93■□□□□ 0.46
SMARCD2-209ENST00000581832 FOXO3O43524 673 aa17.92■□□□□ 0.46
SMARCD2-209ENST00000581832 HIRIP3Q9BW71 556 aaPredicted RBP17.9■□□□□ 0.46
SMARCD2-209ENST00000581832 NPHP3Q7Z494 1330 aa17.9■□□□□ 0.46
SMARCD2-209ENST00000581832 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
SMARCD2-209ENST00000581832 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
SMARCD2-209ENST00000581832 KIF1AQ12756 1690 aa17.89■□□□□ 0.45
SMARCD2-209ENST00000581832 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.45
SMARCD2-209ENST00000581832 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
SMARCD2-209ENST00000581832 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
SMARCD2-209ENST00000581832 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
SMARCD2-209ENST00000581832 SOCS7O14512 581 aa17.87■□□□□ 0.45
SMARCD2-209ENST00000581832 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
SMARCD2-209ENST00000581832 COL22A1Q8NFW1 1626 aaPredicted RBP17.87■□□□□ 0.45
SMARCD2-209ENST00000581832 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
SMARCD2-209ENST00000581832 PHF8Q9UPP1 1060 aa17.86■□□□□ 0.45
SMARCD2-209ENST00000581832 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
SMARCD2-209ENST00000581832 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
SMARCD2-209ENST00000581832 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
SMARCD2-209ENST00000581832 TULP4Q9NRJ4 1543 aa17.85■□□□□ 0.45
SMARCD2-209ENST00000581832 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
SMARCD2-209ENST00000581832 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
SMARCD2-209ENST00000581832 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
SMARCD2-209ENST00000581832 ATP7BP35670 1465 aa17.81■□□□□ 0.44
SMARCD2-209ENST00000581832 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
SMARCD2-209ENST00000581832 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
SMARCD2-209ENST00000581832 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
SMARCD2-209ENST00000581832 CDK19Q9BWU1 502 aa17.8■□□□□ 0.44
SMARCD2-209ENST00000581832 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
SMARCD2-209ENST00000581832 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
SMARCD2-209ENST00000581832 TRPM3Q9HCF6 1732 aaPredicted RBP17.78■□□□□ 0.44
SMARCD2-209ENST00000581832 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
SMARCD2-209ENST00000581832 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
SMARCD2-209ENST00000581832 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
SMARCD2-209ENST00000581832 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
SMARCD2-209ENST00000581832 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.43
SMARCD2-209ENST00000581832 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.43
SMARCD2-209ENST00000581832 AFF2P51816 1311 aa17.76■□□□□ 0.43
SMARCD2-209ENST00000581832 ITSN1Q15811 1721 aa17.76■□□□□ 0.43
SMARCD2-209ENST00000581832 PSME1Q06323 249 aa17.76■□□□□ 0.43
SMARCD2-209ENST00000581832 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
SMARCD2-209ENST00000581832 MARF1Q9Y4F3 1742 aaKnown RBP17.75■□□□□ 0.43
SMARCD2-209ENST00000581832 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
SMARCD2-209ENST00000581832 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
SMARCD2-209ENST00000581832 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
SMARCD2-209ENST00000581832 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
SMARCD2-209ENST00000581832 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
SMARCD2-209ENST00000581832 PLEKHG3A1L390 1219 aa17.73■□□□□ 0.43
SMARCD2-209ENST00000581832 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
SMARCD2-209ENST00000581832 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
SMARCD2-209ENST00000581832 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
SMARCD2-209ENST00000581832 NGLY1Q96IV0 654 aa17.71■□□□□ 0.43
SMARCD2-209ENST00000581832 ABCA3Q99758 1704 aa17.7■□□□□ 0.42
SMARCD2-209ENST00000581832 ARHGEF10O15013 1369 aa17.7■□□□□ 0.42
SMARCD2-209ENST00000581832 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
SMARCD2-209ENST00000581832 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
SMARCD2-209ENST00000581832 CABP2Q9NPB3 220 aa17.7■□□□□ 0.42
SMARCD2-209ENST00000581832 ACEP12821 1306 aa17.69■□□□□ 0.42
SMARCD2-209ENST00000581832 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
SMARCD2-209ENST00000581832 SRPK2P78362 688 aaKnown RBP17.68■□□□□ 0.42
SMARCD2-209ENST00000581832 CARD11Q9BXL7 1154 aa17.68■□□□□ 0.42
SMARCD2-209ENST00000581832 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
SMARCD2-209ENST00000581832 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
SMARCD2-209ENST00000581832 SBNO2Q9Y2G9 1366 aa17.67■□□□□ 0.42
SMARCD2-209ENST00000581832 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
SMARCD2-209ENST00000581832 RXRBP28702 533 aa17.67■□□□□ 0.42
SMARCD2-209ENST00000581832 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
SMARCD2-209ENST00000581832 USP21Q9UK80 565 aa17.66■□□□□ 0.42
SMARCD2-209ENST00000581832 SLIT2O94813 1529 aa17.66■□□□□ 0.42
SMARCD2-209ENST00000581832 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms