RNA–Protein interactions for RNA: ENST00000581438.5

ATG13-228, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-228ENST00000581438 TRAK1Q9UPV9 953 aa25.18■■□□□ 1.62
ATG13-228ENST00000581438 CDC42BPGQ6DT37 1551 aa25.17■■□□□ 1.62
ATG13-228ENST00000581438 KIAA1210Q9ULL0 1709 aa25.17■■□□□ 1.62
ATG13-228ENST00000581438 C1orf167Q5SNV9 1468 aa25.16■■□□□ 1.62
ATG13-228ENST00000581438 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
ATG13-228ENST00000581438 AHDC1Q5TGY3 1603 aaPredicted RBP25.13■■□□□ 1.61
ATG13-228ENST00000581438 SAFB2Q14151 953 aaKnown RBP eCLIP25.12■■□□□ 1.61
ATG13-228ENST00000581438 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
ATG13-228ENST00000581438 DISP3Q9P2K9 1392 aa25.09■■□□□ 1.61
ATG13-228ENST00000581438 NBPF1Q3BBV0 1214 aa25.09■■□□□ 1.61
ATG13-228ENST00000581438 JCADQ9P266 1359 aa25.08■■□□□ 1.61
ATG13-228ENST00000581438 ORAI2Q96SN7 254 aa25.08■■□□□ 1.61
ATG13-228ENST00000581438 ESCO1Q5FWF5 840 aa25.07■■□□□ 1.6
ATG13-228ENST00000581438 COL16A1Q07092 1604 aaPredicted RBP25.07■■□□□ 1.6
ATG13-228ENST00000581438 NUTM2FA1L443 756 aa25.05■■□□□ 1.6
ATG13-228ENST00000581438 NHSL1Q5SYE7 1610 aa25.04■■□□□ 1.6
ATG13-228ENST00000581438 FMN2Q9NZ56 1722 aa25.04■■□□□ 1.6
ATG13-228ENST00000581438 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
ATG13-228ENST00000581438 MED1Q15648 1581 aaPredicted RBP25.03■■□□□ 1.6
ATG13-228ENST00000581438 LRRC59Q96AG4 307 aaKnown RBP25.03■■□□□ 1.6
ATG13-228ENST00000581438 MINK1Q8N4C8 1332 aaPredicted RBP25.03■■□□□ 1.6
ATG13-228ENST00000581438 ADGRB2O60241 1585 aa25.02■■□□□ 1.6
ATG13-228ENST00000581438 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
ATG13-228ENST00000581438 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
ATG13-228ENST00000581438 HIRIP3Q9BW71 556 aaPredicted RBP25.01■■□□□ 1.59
ATG13-228ENST00000581438 NPHP3Q7Z494 1330 aa25.01■■□□□ 1.59
ATG13-228ENST00000581438 DDX17Q92841 729 aaKnown RBP25■■□□□ 1.59
ATG13-228ENST00000581438 ROCK2O75116 1388 aaKnown RBP25■■□□□ 1.59
ATG13-228ENST00000581438 TRPM1Q7Z4N2 1603 aa25■■□□□ 1.59
ATG13-228ENST00000581438 WASLO00401 505 aaPredicted RBP24.99■■□□□ 1.59
ATG13-228ENST00000581438 ANKARQ7Z5J8 1434 aa24.98■■□□□ 1.59
ATG13-228ENST00000581438 SOS2Q07890 1332 aaPredicted RBP24.98■■□□□ 1.59
ATG13-228ENST00000581438 SPATA31A6Q5VVP1 1343 aa24.98■■□□□ 1.59
ATG13-228ENST00000581438 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
ATG13-228ENST00000581438 NBPF8Q3BBV2 869 aa24.97■■□□□ 1.59
ATG13-228ENST00000581438 CENPJQ9HC77 1338 aaPredicted RBP24.95■■□□□ 1.58
ATG13-228ENST00000581438 FOXO3O43524 673 aa24.95■■□□□ 1.58
ATG13-228ENST00000581438 PHF8Q9UPP1 1060 aa24.95■■□□□ 1.58
ATG13-228ENST00000581438 KIF1AQ12756 1690 aa24.94■■□□□ 1.58
ATG13-228ENST00000581438 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
ATG13-228ENST00000581438 GPRASP1Q5JY77 1395 aa24.92■■□□□ 1.58
ATG13-228ENST00000581438 TULP4Q9NRJ4 1543 aa24.91■■□□□ 1.58
ATG13-228ENST00000581438 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
ATG13-228ENST00000581438 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
ATG13-228ENST00000581438 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
ATG13-228ENST00000581438 CDK19Q9BWU1 502 aa24.89■■□□□ 1.58
ATG13-228ENST00000581438 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.58
ATG13-228ENST00000581438 PNPLA6Q8IY17 1366 aa24.89■■□□□ 1.57
ATG13-228ENST00000581438 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.57
ATG13-228ENST00000581438 PSME1Q06323 249 aa24.88■■□□□ 1.57
ATG13-228ENST00000581438 USP32Q8NFA0 1604 aa24.87■■□□□ 1.57
ATG13-228ENST00000581438 MEX3CQ5U5Q3 659 aaKnown RBP24.87■■□□□ 1.57
ATG13-228ENST00000581438 KRT28Q7Z3Y7 464 aa24.87■■□□□ 1.57
ATG13-228ENST00000581438 PXDNQ92626 1479 aa24.87■■□□□ 1.57
ATG13-228ENST00000581438 PRR36Q9H6K5 1346 aa24.86■■□□□ 1.57
ATG13-228ENST00000581438 XPCQ01831 940 aaPredicted RBP24.86■■□□□ 1.57
ATG13-228ENST00000581438 PMFBP1Q8TBY8 1022 aa24.86■■□□□ 1.57
ATG13-228ENST00000581438 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
ATG13-228ENST00000581438 NUTM2BA6NNL0 878 aaPredicted RBP24.85■■□□□ 1.57
ATG13-228ENST00000581438 NUTM2EB1AL46 878 aaPredicted RBP24.85■■□□□ 1.57
ATG13-228ENST00000581438 NUTM2AQ8IVF1 878 aaPredicted RBP24.85■■□□□ 1.57
ATG13-228ENST00000581438 QRICH2Q9H0J4 1663 aa24.84■■□□□ 1.57
ATG13-228ENST00000581438 SRPK2P78362 688 aaKnown RBP24.83■■□□□ 1.57
ATG13-228ENST00000581438 NGDNQ8NEJ9 315 aaKnown RBP24.82■■□□□ 1.56
ATG13-228ENST00000581438 CCDC61Q9Y6R9 512 aa24.82■■□□□ 1.56
ATG13-228ENST00000581438 ATP7BP35670 1465 aa24.82■■□□□ 1.56
ATG13-228ENST00000581438 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
ATG13-228ENST00000581438 LRP6O75581 1613 aa24.81■■□□□ 1.56
ATG13-228ENST00000581438 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
ATG13-228ENST00000581438 SPATA31A3Q5VYP0 1347 aa24.8■■□□□ 1.56
ATG13-228ENST00000581438 SBNO1A3KN83 1393 aa24.8■■□□□ 1.56
ATG13-228ENST00000581438 TNS3Q68CZ2 1445 aa24.77■■□□□ 1.56
ATG13-228ENST00000581438 COL22A1Q8NFW1 1626 aaPredicted RBP24.76■■□□□ 1.55
ATG13-228ENST00000581438 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
ATG13-228ENST00000581438 ILDR2Q71H61 639 aa24.75■■□□□ 1.55
ATG13-228ENST00000581438 RGS17Q9UGC6 210 aaPredicted RBP24.75■■□□□ 1.55
ATG13-228ENST00000581438 SBNO2Q9Y2G9 1366 aa24.75■■□□□ 1.55
ATG13-228ENST00000581438 PLEKHG3A1L390 1219 aa24.74■■□□□ 1.55
ATG13-228ENST00000581438 ARHGEF10O15013 1369 aa24.74■■□□□ 1.55
ATG13-228ENST00000581438 ZNF772Q68DY9 489 aaPredicted RBP24.73■■□□□ 1.55
ATG13-228ENST00000581438 LMOD2Q6P5Q4 547 aa24.73■■□□□ 1.55
ATG13-228ENST00000581438 ADAMTS2O95450 1211 aa24.72■■□□□ 1.55
ATG13-228ENST00000581438 TOPAZ1Q8N9V7 1692 aa24.72■■□□□ 1.55
ATG13-228ENST00000581438 ACEP12821 1306 aa24.71■■□□□ 1.55
ATG13-228ENST00000581438 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
ATG13-228ENST00000581438 PPIP5K1Q6PFW1 1433 aa24.7■■□□□ 1.55
ATG13-228ENST00000581438 POLR3AO14802 1390 aaPredicted RBP24.7■■□□□ 1.55
ATG13-228ENST00000581438 C8orf37Q96NL8 207 aa24.7■■□□□ 1.54
ATG13-228ENST00000581438 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
ATG13-228ENST00000581438 HAP1P54257 671 aaPredicted RBP24.68■■□□□ 1.54
ATG13-228ENST00000581438 NGLY1Q96IV0 654 aa24.68■■□□□ 1.54
ATG13-228ENST00000581438 ATAD2Q6PL18 1390 aa24.67■■□□□ 1.54
ATG13-228ENST00000581438 TRPM3Q9HCF6 1732 aaPredicted RBP24.66■■□□□ 1.54
ATG13-228ENST00000581438 AFF2P51816 1311 aa24.66■■□□□ 1.54
ATG13-228ENST00000581438 POTEAQ6S8J7 498 aa24.66■■□□□ 1.54
ATG13-228ENST00000581438 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
ATG13-228ENST00000581438 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
ATG13-228ENST00000581438 BRD4O60885 1362 aaPredicted RBP24.63■■□□□ 1.53
ATG13-228ENST00000581438 USP47Q96K76 1375 aa24.63■■□□□ 1.53
ATG13-228ENST00000581438 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms