RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
SMCHD1-205ENST00000581383 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
SMCHD1-205ENST00000581383 FAM187AA6NFU0 413 aa10.38□□□□□ -0.75
SMCHD1-205ENST00000581383 PLA2G2CQ5R387 149 aa10.38□□□□□ -0.75
SMCHD1-205ENST00000581383 USB1Q9BQ65 265 aaKnown RBP10.38□□□□□ -0.75
SMCHD1-205ENST00000581383 SSTR3P32745 418 aaPredicted RBP10.37□□□□□ -0.75
SMCHD1-205ENST00000581383 MYT1Q01538 1121 aa10.37□□□□□ -0.75
SMCHD1-205ENST00000581383 BARGINQ6ZT62 677 aa10.37□□□□□ -0.75
SMCHD1-205ENST00000581383 HOXA2O43364 376 aa10.36□□□□□ -0.75
SMCHD1-205ENST00000581383 ZMYND10O75800 440 aa10.36□□□□□ -0.75
SMCHD1-205ENST00000581383 RPIAP49247 311 aa10.36□□□□□ -0.75
SMCHD1-205ENST00000581383 MSS51Q4VC12 460 aa10.36□□□□□ -0.75
SMCHD1-205ENST00000581383 EMID1Q96A84 441 aaPredicted RBP10.36□□□□□ -0.75
SMCHD1-205ENST00000581383 HLA-CQ95604 372 aa10.35□□□□□ -0.75
SMCHD1-205ENST00000581383 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
SMCHD1-205ENST00000581383 GUCA2AQ02747 115 aa10.34□□□□□ -0.75
SMCHD1-205ENST00000581383 DGAT1O75907 488 aa10.33□□□□□ -0.76
SMCHD1-205ENST00000581383 PRR20EP86478 221 aa10.33□□□□□ -0.76
SMCHD1-205ENST00000581383 PRR20CP86479 221 aa10.33□□□□□ -0.76
SMCHD1-205ENST00000581383 PRR20DP86480 221 aa10.33□□□□□ -0.76
SMCHD1-205ENST00000581383 PRR20BP86481 221 aa10.33□□□□□ -0.76
SMCHD1-205ENST00000581383 PRR20AP86496 221 aa10.33□□□□□ -0.76
SMCHD1-205ENST00000581383 TRIM67Q6ZTA4 783 aa10.32□□□□□ -0.76
SMCHD1-205ENST00000581383 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
SMCHD1-205ENST00000581383 FDX1P10109 184 aa10.31□□□□□ -0.76
SMCHD1-205ENST00000581383 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
SMCHD1-205ENST00000581383 LOC100996750A0A140TA64 210 aa10.3□□□□□ -0.76
SMCHD1-205ENST00000581383 TTC24A2A3L6 582 aaPredicted RBP10.3□□□□□ -0.76
SMCHD1-205ENST00000581383 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
SMCHD1-205ENST00000581383 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
SMCHD1-205ENST00000581383 KRTAP4-6Q9BYQ5 205 aa10.3□□□□□ -0.76
SMCHD1-205ENST00000581383 GDF9O60383 454 aa10.29□□□□□ -0.76
SMCHD1-205ENST00000581383 AK7Q96M32 723 aa10.29□□□□□ -0.76
SMCHD1-205ENST00000581383 REPIN1Q9BWE0 567 aaKnown RBP10.29□□□□□ -0.76
SMCHD1-205ENST00000581383 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
SMCHD1-205ENST00000581383 MMP16P51512 607 aa10.27□□□□□ -0.77
SMCHD1-205ENST00000581383 AMHR2Q16671 573 aa10.27□□□□□ -0.77
SMCHD1-205ENST00000581383 TRIM32Q13049 653 aa10.26□□□□□ -0.77
SMCHD1-205ENST00000581383 RETREG3Q86VR2 466 aa10.26□□□□□ -0.77
SMCHD1-205ENST00000581383 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
SMCHD1-205ENST00000581383 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
SMCHD1-205ENST00000581383 JUNDP17535 347 aa10.25□□□□□ -0.77
SMCHD1-205ENST00000581383 NDUFV2P19404 249 aa10.25□□□□□ -0.77
SMCHD1-205ENST00000581383 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
SMCHD1-205ENST00000581383 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
SMCHD1-205ENST00000581383 TRIM66O15016 1216 aa10.23□□□□□ -0.77
SMCHD1-205ENST00000581383 NUDT12Q9BQG2 462 aa10.23□□□□□ -0.77
SMCHD1-205ENST00000581383 MOXD2PA6NHM9 499 aa10.22□□□□□ -0.77
SMCHD1-205ENST00000581383 WFS1O76024 890 aa10.21□□□□□ -0.77
SMCHD1-205ENST00000581383 MS4A1P11836 297 aa10.21□□□□□ -0.77
SMCHD1-205ENST00000581383 MTMR2Q13614 643 aa10.21□□□□□ -0.77
SMCHD1-205ENST00000581383 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
SMCHD1-205ENST00000581383 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
SMCHD1-205ENST00000581383 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
SMCHD1-205ENST00000581383 WNT7AO00755 349 aa10.19□□□□□ -0.78
SMCHD1-205ENST00000581383 INSM1Q01101 510 aaPredicted RBP10.19□□□□□ -0.78
SMCHD1-205ENST00000581383 PCDHGC3Q9UN70 934 aa10.19□□□□□ -0.78
SMCHD1-205ENST00000581383 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 ST8SIA5O15466 376 aa10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 SNIP1Q8TAD8 396 aaKnown RBP10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 TSC1Q92574 1164 aa10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
SMCHD1-205ENST00000581383 AXIN1O15169 862 aa10.17□□□□□ -0.78
SMCHD1-205ENST00000581383 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
SMCHD1-205ENST00000581383 MRGPRX2Q96LB1 330 aa10.17□□□□□ -0.78
SMCHD1-205ENST00000581383 TOR4AQ9NXH8 423 aa10.17□□□□□ -0.78
SMCHD1-205ENST00000581383 WIPF1O43516 503 aa10.16□□□□□ -0.78
SMCHD1-205ENST00000581383 PDE4DQ08499 809 aa10.16□□□□□ -0.78
SMCHD1-205ENST00000581383 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
SMCHD1-205ENST00000581383 NUTM2BA6NNL0 878 aaPredicted RBP10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 NUTM2EB1AL46 878 aaPredicted RBP10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 CTHP32929 405 aa10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 WNT7BP56706 349 aa10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 NUTM2DQ5VT03 806 aaPredicted RBP10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 NUTM2AQ8IVF1 878 aaPredicted RBP10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
SMCHD1-205ENST00000581383 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
SMCHD1-205ENST00000581383 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
SMCHD1-205ENST00000581383 PTPRNQ16849 979 aa10.13□□□□□ -0.79
SMCHD1-205ENST00000581383 RSBN1LQ6PCB5 846 aaPredicted RBP10.13□□□□□ -0.79
SMCHD1-205ENST00000581383 ALDH1A1P00352 501 aa10.12□□□□□ -0.79
SMCHD1-205ENST00000581383 CTC1Q2NKJ3 1217 aa10.12□□□□□ -0.79
SMCHD1-205ENST00000581383 WASF2Q9Y6W5 498 aa10.11□□□□□ -0.79
SMCHD1-205ENST00000581383 J3QL48 77 aa10.1□□□□□ -0.79
SMCHD1-205ENST00000581383 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
SMCHD1-205ENST00000581383 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
SMCHD1-205ENST00000581383 UNC93B1Q9H1C4 597 aa10.1□□□□□ -0.79
SMCHD1-205ENST00000581383 GJA5P36382 358 aa10.09□□□□□ -0.79
SMCHD1-205ENST00000581383 SKOR1P84550 965 aa10.09□□□□□ -0.79
SMCHD1-205ENST00000581383 KCNH2Q12809 1159 aa10.09□□□□□ -0.79
SMCHD1-205ENST00000581383 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
SMCHD1-205ENST00000581383 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
SMCHD1-205ENST00000581383 SMPD1P17405 629 aa10.08□□□□□ -0.8
SMCHD1-205ENST00000581383 HRCP23327 699 aa10.08□□□□□ -0.8
SMCHD1-205ENST00000581383 EVA1BQ9NVM1 165 aa10.08□□□□□ -0.8
SMCHD1-205ENST00000581383 C11orf95C9JLR9 678 aaPredicted RBP10.07□□□□□ -0.8
SMCHD1-205ENST00000581383 SPTLC1O15269 473 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms