RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
PPP4R1-219ENST00000581250 FMN2Q9NZ56 1722 aa17.27■□□□□ 0.35
PPP4R1-219ENST00000581250 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
PPP4R1-219ENST00000581250 ILDR2Q71H61 639 aa17.26■□□□□ 0.35
PPP4R1-219ENST00000581250 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
PPP4R1-219ENST00000581250 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
PPP4R1-219ENST00000581250 JCADQ9P266 1359 aa17.26■□□□□ 0.35
PPP4R1-219ENST00000581250 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
PPP4R1-219ENST00000581250 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
PPP4R1-219ENST00000581250 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
PPP4R1-219ENST00000581250 SHPRHQ149N8 1683 aa17.25■□□□□ 0.35
PPP4R1-219ENST00000581250 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
PPP4R1-219ENST00000581250 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
PPP4R1-219ENST00000581250 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-219ENST00000581250 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
PPP4R1-219ENST00000581250 KIAA1210Q9ULL0 1709 aa17.23■□□□□ 0.35
PPP4R1-219ENST00000581250 POGKQ9P215 609 aa17.22■□□□□ 0.35
PPP4R1-219ENST00000581250 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
PPP4R1-219ENST00000581250 ESCO1Q5FWF5 840 aa17.2■□□□□ 0.34
PPP4R1-219ENST00000581250 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
PPP4R1-219ENST00000581250 LRP6O75581 1613 aa17.2■□□□□ 0.34
PPP4R1-219ENST00000581250 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
PPP4R1-219ENST00000581250 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
PPP4R1-219ENST00000581250 HIRIP3Q9BW71 556 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-219ENST00000581250 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-219ENST00000581250 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 USP32Q8NFA0 1604 aa17.16■□□□□ 0.34
PPP4R1-219ENST00000581250 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
PPP4R1-219ENST00000581250 TRPM1Q7Z4N2 1603 aa17.15■□□□□ 0.34
PPP4R1-219ENST00000581250 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
PPP4R1-219ENST00000581250 PXDNQ92626 1479 aa17.14■□□□□ 0.33
PPP4R1-219ENST00000581250 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-219ENST00000581250 LRRC59Q96AG4 307 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-219ENST00000581250 FOXO3O43524 673 aa17.13■□□□□ 0.33
PPP4R1-219ENST00000581250 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-219ENST00000581250 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-219ENST00000581250 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
PPP4R1-219ENST00000581250 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
PPP4R1-219ENST00000581250 ANKARQ7Z5J8 1434 aa17.1■□□□□ 0.33
PPP4R1-219ENST00000581250 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
PPP4R1-219ENST00000581250 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
PPP4R1-219ENST00000581250 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
PPP4R1-219ENST00000581250 COL22A1Q8NFW1 1626 aaPredicted RBP17.08■□□□□ 0.32
PPP4R1-219ENST00000581250 PRR36Q9H6K5 1346 aa17.08■□□□□ 0.32
PPP4R1-219ENST00000581250 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
PPP4R1-219ENST00000581250 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
PPP4R1-219ENST00000581250 ROCK2O75116 1388 aaKnown RBP17.07■□□□□ 0.32
PPP4R1-219ENST00000581250 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
PPP4R1-219ENST00000581250 WASLO00401 505 aaPredicted RBP17.07■□□□□ 0.32
PPP4R1-219ENST00000581250 POTEAQ6S8J7 498 aa17.07■□□□□ 0.32
PPP4R1-219ENST00000581250 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
PPP4R1-219ENST00000581250 ATP7BP35670 1465 aa17.06■□□□□ 0.32
PPP4R1-219ENST00000581250 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
PPP4R1-219ENST00000581250 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
PPP4R1-219ENST00000581250 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
PPP4R1-219ENST00000581250 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
PPP4R1-219ENST00000581250 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
PPP4R1-219ENST00000581250 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
PPP4R1-219ENST00000581250 SOCS7O14512 581 aa17.03■□□□□ 0.32
PPP4R1-219ENST00000581250 TNS3Q68CZ2 1445 aa17.03■□□□□ 0.32
PPP4R1-219ENST00000581250 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.32
PPP4R1-219ENST00000581250 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
PPP4R1-219ENST00000581250 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
PPP4R1-219ENST00000581250 AFF2P51816 1311 aa17.01■□□□□ 0.31
PPP4R1-219ENST00000581250 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
PPP4R1-219ENST00000581250 PSME1Q06323 249 aa17.01■□□□□ 0.31
PPP4R1-219ENST00000581250 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
PPP4R1-219ENST00000581250 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
PPP4R1-219ENST00000581250 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
PPP4R1-219ENST00000581250 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
PPP4R1-219ENST00000581250 ABCA3Q99758 1704 aa17■□□□□ 0.31
PPP4R1-219ENST00000581250 SRPK2P78362 688 aaKnown RBP16.98■□□□□ 0.31
PPP4R1-219ENST00000581250 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
PPP4R1-219ENST00000581250 NGDNQ8NEJ9 315 aaKnown RBP16.98■□□□□ 0.31
PPP4R1-219ENST00000581250 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
PPP4R1-219ENST00000581250 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
PPP4R1-219ENST00000581250 ALS2Q96Q42 1657 aa16.97■□□□□ 0.31
PPP4R1-219ENST00000581250 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
PPP4R1-219ENST00000581250 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
PPP4R1-219ENST00000581250 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
PPP4R1-219ENST00000581250 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
PPP4R1-219ENST00000581250 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
PPP4R1-219ENST00000581250 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
PPP4R1-219ENST00000581250 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
PPP4R1-219ENST00000581250 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
PPP4R1-219ENST00000581250 CCDC61Q9Y6R9 512 aa16.92■□□□□ 0.3
PPP4R1-219ENST00000581250 ACEP12821 1306 aa16.92■□□□□ 0.3
PPP4R1-219ENST00000581250 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-219ENST00000581250 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
PPP4R1-219ENST00000581250 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
PPP4R1-219ENST00000581250 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
PPP4R1-219ENST00000581250 USP21Q9UK80 565 aa16.9■□□□□ 0.3
PPP4R1-219ENST00000581250 RXRBP28702 533 aa16.89■□□□□ 0.29
PPP4R1-219ENST00000581250 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-219ENST00000581250 PLEKHG3A1L390 1219 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms