RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
CBX1-206ENST00000581003 LRP6O75581 1613 aa18.41■□□□□ 0.54
CBX1-206ENST00000581003 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
CBX1-206ENST00000581003 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
CBX1-206ENST00000581003 JCADQ9P266 1359 aa18.39■□□□□ 0.53
CBX1-206ENST00000581003 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
CBX1-206ENST00000581003 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
CBX1-206ENST00000581003 SHPRHQ149N8 1683 aa18.36■□□□□ 0.53
CBX1-206ENST00000581003 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
CBX1-206ENST00000581003 SIN3AQ96ST3 1273 aa18.36■□□□□ 0.53
CBX1-206ENST00000581003 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
CBX1-206ENST00000581003 TRAK1Q9UPV9 953 aa18.34■□□□□ 0.53
CBX1-206ENST00000581003 DLC1Q96QB1 1528 aa18.33■□□□□ 0.53
CBX1-206ENST00000581003 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
CBX1-206ENST00000581003 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
CBX1-206ENST00000581003 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
CBX1-206ENST00000581003 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
CBX1-206ENST00000581003 HIRIP3Q9BW71 556 aaPredicted RBP18.3■□□□□ 0.52
CBX1-206ENST00000581003 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
CBX1-206ENST00000581003 PXDNQ92626 1479 aa18.29■□□□□ 0.52
CBX1-206ENST00000581003 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
CBX1-206ENST00000581003 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
CBX1-206ENST00000581003 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
CBX1-206ENST00000581003 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
CBX1-206ENST00000581003 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
CBX1-206ENST00000581003 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
CBX1-206ENST00000581003 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
CBX1-206ENST00000581003 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
CBX1-206ENST00000581003 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
CBX1-206ENST00000581003 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
CBX1-206ENST00000581003 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.52
CBX1-206ENST00000581003 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
CBX1-206ENST00000581003 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
CBX1-206ENST00000581003 MINK1Q8N4C8 1332 aaPredicted RBP18.27■□□□□ 0.52
CBX1-206ENST00000581003 POGKQ9P215 609 aa18.27■□□□□ 0.52
CBX1-206ENST00000581003 FOXO3O43524 673 aa18.26■□□□□ 0.51
CBX1-206ENST00000581003 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
CBX1-206ENST00000581003 SOCS7O14512 581 aa18.24■□□□□ 0.51
CBX1-206ENST00000581003 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
CBX1-206ENST00000581003 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
CBX1-206ENST00000581003 STAC3Q96MF2 364 aa18.23■□□□□ 0.51
CBX1-206ENST00000581003 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
CBX1-206ENST00000581003 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
CBX1-206ENST00000581003 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
CBX1-206ENST00000581003 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
CBX1-206ENST00000581003 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
CBX1-206ENST00000581003 TULP4Q9NRJ4 1543 aa18.19■□□□□ 0.5
CBX1-206ENST00000581003 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
CBX1-206ENST00000581003 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
CBX1-206ENST00000581003 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
CBX1-206ENST00000581003 ANKARQ7Z5J8 1434 aa18.17■□□□□ 0.5
CBX1-206ENST00000581003 ATP7BP35670 1465 aa18.16■□□□□ 0.5
CBX1-206ENST00000581003 WASLO00401 505 aaPredicted RBP18.16■□□□□ 0.5
CBX1-206ENST00000581003 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
CBX1-206ENST00000581003 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
CBX1-206ENST00000581003 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
CBX1-206ENST00000581003 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
CBX1-206ENST00000581003 AFF2P51816 1311 aa18.15■□□□□ 0.5
CBX1-206ENST00000581003 SPATA31A3Q5VYP0 1347 aa18.14■□□□□ 0.49
CBX1-206ENST00000581003 QRICH2Q9H0J4 1663 aa18.13■□□□□ 0.49
CBX1-206ENST00000581003 TNS3Q68CZ2 1445 aa18.12■□□□□ 0.49
CBX1-206ENST00000581003 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
CBX1-206ENST00000581003 TRPM3Q9HCF6 1732 aaPredicted RBP18.12■□□□□ 0.49
CBX1-206ENST00000581003 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
CBX1-206ENST00000581003 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
CBX1-206ENST00000581003 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
CBX1-206ENST00000581003 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
CBX1-206ENST00000581003 CENPJQ9HC77 1338 aaPredicted RBP18.09■□□□□ 0.49
CBX1-206ENST00000581003 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
CBX1-206ENST00000581003 TONSLQ96HA7 1378 aa18.08■□□□□ 0.49
CBX1-206ENST00000581003 PSME1Q06323 249 aa18.08■□□□□ 0.48
CBX1-206ENST00000581003 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.48
CBX1-206ENST00000581003 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
CBX1-206ENST00000581003 ITSN1Q15811 1721 aa18.07■□□□□ 0.48
CBX1-206ENST00000581003 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
CBX1-206ENST00000581003 NGLY1Q96IV0 654 aa18.07■□□□□ 0.48
CBX1-206ENST00000581003 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
CBX1-206ENST00000581003 SBNO1A3KN83 1393 aa18.06■□□□□ 0.48
CBX1-206ENST00000581003 ALS2Q96Q42 1657 aa18.06■□□□□ 0.48
CBX1-206ENST00000581003 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
CBX1-206ENST00000581003 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
CBX1-206ENST00000581003 RALGAPBQ86X10 1494 aa18.04■□□□□ 0.48
CBX1-206ENST00000581003 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
CBX1-206ENST00000581003 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
CBX1-206ENST00000581003 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
CBX1-206ENST00000581003 RGS12O14924 1447 aa18.02■□□□□ 0.48
CBX1-206ENST00000581003 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.48
CBX1-206ENST00000581003 CRYBG1Q9Y4K1 1723 aa18.02■□□□□ 0.48
CBX1-206ENST00000581003 PPIP5K1Q6PFW1 1433 aa18.01■□□□□ 0.47
CBX1-206ENST00000581003 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
CBX1-206ENST00000581003 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
CBX1-206ENST00000581003 USP21Q9UK80 565 aa18.01■□□□□ 0.47
CBX1-206ENST00000581003 ACEP12821 1306 aa18■□□□□ 0.47
CBX1-206ENST00000581003 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
CBX1-206ENST00000581003 RXRBP28702 533 aa18■□□□□ 0.47
CBX1-206ENST00000581003 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
CBX1-206ENST00000581003 ARHGEF10O15013 1369 aa18■□□□□ 0.47
CBX1-206ENST00000581003 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
CBX1-206ENST00000581003 ATRNO75882 1429 aa17.98■□□□□ 0.47
CBX1-206ENST00000581003 SLIT2O94813 1529 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms