RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
NUP85-215ENST00000580879 POGKQ9P215 609 aa19.14■□□□□ 0.65
NUP85-215ENST00000580879 NUTM2FA1L443 756 aa19.13■□□□□ 0.65
NUP85-215ENST00000580879 NBPF1Q3BBV0 1214 aa19.13■□□□□ 0.65
NUP85-215ENST00000580879 DDX17Q92841 729 aaKnown RBP19.13■□□□□ 0.65
NUP85-215ENST00000580879 DISP3Q9P2K9 1392 aa19.13■□□□□ 0.65
NUP85-215ENST00000580879 PHLPP1O60346 1717 aa19.13■□□□□ 0.65
NUP85-215ENST00000580879 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
NUP85-215ENST00000580879 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
NUP85-215ENST00000580879 ORAI2Q96SN7 254 aa19.12■□□□□ 0.65
NUP85-215ENST00000580879 COL16A1Q07092 1604 aaPredicted RBP19.09■□□□□ 0.65
NUP85-215ENST00000580879 AHDC1Q5TGY3 1603 aaPredicted RBP19.09■□□□□ 0.65
NUP85-215ENST00000580879 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
NUP85-215ENST00000580879 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
NUP85-215ENST00000580879 MINK1Q8N4C8 1332 aaPredicted RBP19.07■□□□□ 0.64
NUP85-215ENST00000580879 ESCO1Q5FWF5 840 aa19.07■□□□□ 0.64
NUP85-215ENST00000580879 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
NUP85-215ENST00000580879 KIAA1210Q9ULL0 1709 aa19.06■□□□□ 0.64
NUP85-215ENST00000580879 JCADQ9P266 1359 aa19.05■□□□□ 0.64
NUP85-215ENST00000580879 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
NUP85-215ENST00000580879 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
NUP85-215ENST00000580879 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
NUP85-215ENST00000580879 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
NUP85-215ENST00000580879 FOXO3O43524 673 aa19■□□□□ 0.63
NUP85-215ENST00000580879 XPCQ01831 940 aaPredicted RBP19■□□□□ 0.63
NUP85-215ENST00000580879 ROCK2O75116 1388 aaKnown RBP19■□□□□ 0.63
NUP85-215ENST00000580879 ADGRB2O60241 1585 aa19■□□□□ 0.63
NUP85-215ENST00000580879 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
NUP85-215ENST00000580879 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
NUP85-215ENST00000580879 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
NUP85-215ENST00000580879 LRRC59Q96AG4 307 aaKnown RBP18.98■□□□□ 0.63
NUP85-215ENST00000580879 SOS2Q07890 1332 aaPredicted RBP18.98■□□□□ 0.63
NUP85-215ENST00000580879 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
NUP85-215ENST00000580879 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
NUP85-215ENST00000580879 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
NUP85-215ENST00000580879 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
NUP85-215ENST00000580879 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
NUP85-215ENST00000580879 NUTM2BA6NNL0 878 aaPredicted RBP18.95■□□□□ 0.62
NUP85-215ENST00000580879 NUTM2EB1AL46 878 aaPredicted RBP18.95■□□□□ 0.62
NUP85-215ENST00000580879 ILDR2Q71H61 639 aa18.95■□□□□ 0.62
NUP85-215ENST00000580879 NUTM2AQ8IVF1 878 aaPredicted RBP18.95■□□□□ 0.62
NUP85-215ENST00000580879 PMFBP1Q8TBY8 1022 aa18.95■□□□□ 0.62
NUP85-215ENST00000580879 USP32Q8NFA0 1604 aa18.95■□□□□ 0.62
NUP85-215ENST00000580879 SPATA31A6Q5VVP1 1343 aa18.95■□□□□ 0.62
NUP85-215ENST00000580879 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
NUP85-215ENST00000580879 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
NUP85-215ENST00000580879 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
NUP85-215ENST00000580879 LRP6O75581 1613 aa18.94■□□□□ 0.62
NUP85-215ENST00000580879 PXDNQ92626 1479 aa18.94■□□□□ 0.62
NUP85-215ENST00000580879 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
NUP85-215ENST00000580879 TULP4Q9NRJ4 1543 aa18.93■□□□□ 0.62
NUP85-215ENST00000580879 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
NUP85-215ENST00000580879 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
NUP85-215ENST00000580879 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
NUP85-215ENST00000580879 MEX3CQ5U5Q3 659 aaKnown RBP18.91■□□□□ 0.62
NUP85-215ENST00000580879 KRT28Q7Z3Y7 464 aa18.91■□□□□ 0.62
NUP85-215ENST00000580879 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
NUP85-215ENST00000580879 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
NUP85-215ENST00000580879 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
NUP85-215ENST00000580879 NUDT16Q96DE0 195 aaKnown RBP18.9■□□□□ 0.62
NUP85-215ENST00000580879 RGS17Q9UGC6 210 aaPredicted RBP18.9■□□□□ 0.62
NUP85-215ENST00000580879 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
NUP85-215ENST00000580879 ATP7BP35670 1465 aa18.89■□□□□ 0.61
NUP85-215ENST00000580879 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
NUP85-215ENST00000580879 PSME1Q06323 249 aa18.88■□□□□ 0.61
NUP85-215ENST00000580879 SRPK2P78362 688 aaKnown RBP18.87■□□□□ 0.61
NUP85-215ENST00000580879 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
NUP85-215ENST00000580879 SPATA31A3Q5VYP0 1347 aa18.85■□□□□ 0.61
NUP85-215ENST00000580879 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
NUP85-215ENST00000580879 ADAMTS2O95450 1211 aa18.85■□□□□ 0.61
NUP85-215ENST00000580879 NGDNQ8NEJ9 315 aaKnown RBP18.85■□□□□ 0.61
NUP85-215ENST00000580879 LMOD2Q6P5Q4 547 aa18.84■□□□□ 0.61
NUP85-215ENST00000580879 CCDC61Q9Y6R9 512 aa18.83■□□□□ 0.6
NUP85-215ENST00000580879 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.6
NUP85-215ENST00000580879 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
NUP85-215ENST00000580879 C8orf37Q96NL8 207 aa18.82■□□□□ 0.6
NUP85-215ENST00000580879 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
NUP85-215ENST00000580879 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
NUP85-215ENST00000580879 SBNO1A3KN83 1393 aa18.81■□□□□ 0.6
NUP85-215ENST00000580879 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
NUP85-215ENST00000580879 TIMELESSQ9UNS1 1208 aa18.8■□□□□ 0.6
NUP85-215ENST00000580879 TOPAZ1Q8N9V7 1692 aa18.79■□□□□ 0.6
NUP85-215ENST00000580879 PAK3O75914 559 aaPredicted RBP18.79■□□□□ 0.6
NUP85-215ENST00000580879 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
NUP85-215ENST00000580879 PPIP5K1Q6PFW1 1433 aa18.79■□□□□ 0.6
NUP85-215ENST00000580879 ACEP12821 1306 aa18.78■□□□□ 0.6
NUP85-215ENST00000580879 AFF2P51816 1311 aa18.78■□□□□ 0.6
NUP85-215ENST00000580879 PLEKHG3A1L390 1219 aa18.78■□□□□ 0.6
NUP85-215ENST00000580879 TRPM3Q9HCF6 1732 aaPredicted RBP18.77■□□□□ 0.59
NUP85-215ENST00000580879 NGLY1Q96IV0 654 aa18.76■□□□□ 0.59
NUP85-215ENST00000580879 CABP1Q9NZU7 370 aa18.76■□□□□ 0.59
NUP85-215ENST00000580879 POLR3AO14802 1390 aaPredicted RBP18.76■□□□□ 0.59
NUP85-215ENST00000580879 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
NUP85-215ENST00000580879 ST20-MTHFSA0A0A6YYL1 179 aa18.75■□□□□ 0.59
NUP85-215ENST00000580879 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
NUP85-215ENST00000580879 ZNF772Q68DY9 489 aaPredicted RBP18.75■□□□□ 0.59
NUP85-215ENST00000580879 SBNO2Q9Y2G9 1366 aa18.75■□□□□ 0.59
NUP85-215ENST00000580879 USP47Q96K76 1375 aa18.72■□□□□ 0.59
NUP85-215ENST00000580879 NUTM2GQ5VZR2 741 aa18.72■□□□□ 0.59
NUP85-215ENST00000580879 ALS2Q96Q42 1657 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms