RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 NUTM2FA1L443 756 aa24.13■■□□□ 1.45
SREBF1-219ENST00000580540 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-219ENST00000580540 ORAI2Q96SN7 254 aa24.13■■□□□ 1.45
SREBF1-219ENST00000580540 KNDC1Q76NI1 1749 aa24.11■■□□□ 1.45
SREBF1-219ENST00000580540 SIRT1Q96EB6 747 aa24.11■■□□□ 1.45
SREBF1-219ENST00000580540 PRAM1Q96QH2 718 aa24.11■■□□□ 1.45
SREBF1-219ENST00000580540 POGKQ9P215 609 aa24.11■■□□□ 1.45
SREBF1-219ENST00000580540 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
SREBF1-219ENST00000580540 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
SREBF1-219ENST00000580540 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
SREBF1-219ENST00000580540 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.45
SREBF1-219ENST00000580540 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
SREBF1-219ENST00000580540 CDC42BPGQ6DT37 1551 aa24.06■■□□□ 1.44
SREBF1-219ENST00000580540 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
SREBF1-219ENST00000580540 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
SREBF1-219ENST00000580540 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
SREBF1-219ENST00000580540 NHSL1Q5SYE7 1610 aa24.04■■□□□ 1.44
SREBF1-219ENST00000580540 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
SREBF1-219ENST00000580540 SPATA31A6Q5VVP1 1343 aa24.04■■□□□ 1.44
SREBF1-219ENST00000580540 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
SREBF1-219ENST00000580540 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-219ENST00000580540 DLC1Q96QB1 1528 aa24■■□□□ 1.43
SREBF1-219ENST00000580540 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
SREBF1-219ENST00000580540 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
SREBF1-219ENST00000580540 FOXO3O43524 673 aa23.99■■□□□ 1.43
SREBF1-219ENST00000580540 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-219ENST00000580540 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
SREBF1-219ENST00000580540 XPCQ01831 940 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-219ENST00000580540 SOCS7O14512 581 aa23.97■■□□□ 1.43
SREBF1-219ENST00000580540 SOS2Q07890 1332 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-219ENST00000580540 NPHP3Q7Z494 1330 aa23.97■■□□□ 1.43
SREBF1-219ENST00000580540 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
SREBF1-219ENST00000580540 LRP6O75581 1613 aa23.96■■□□□ 1.43
SREBF1-219ENST00000580540 NBPF1Q3BBV0 1214 aa23.96■■□□□ 1.43
SREBF1-219ENST00000580540 PNPLA6Q8IY17 1366 aa23.94■■□□□ 1.42
SREBF1-219ENST00000580540 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
SREBF1-219ENST00000580540 PHF8Q9UPP1 1060 aa23.92■■□□□ 1.42
SREBF1-219ENST00000580540 RGPD8O14715 1765 aaPredicted RBP23.89■■□□□ 1.42
SREBF1-219ENST00000580540 KIAA1210Q9ULL0 1709 aa23.88■■□□□ 1.41
SREBF1-219ENST00000580540 WASLO00401 505 aaPredicted RBP23.88■■□□□ 1.41
SREBF1-219ENST00000580540 ADAMTS2O95450 1211 aa23.88■■□□□ 1.41
SREBF1-219ENST00000580540 KRT28Q7Z3Y7 464 aa23.88■■□□□ 1.41
SREBF1-219ENST00000580540 PMFBP1Q8TBY8 1022 aa23.88■■□□□ 1.41
SREBF1-219ENST00000580540 C8orf37Q96NL8 207 aa23.87■■□□□ 1.41
SREBF1-219ENST00000580540 ARHGEF28Q8N1W1 1705 aaKnown RBP23.87■■□□□ 1.41
SREBF1-219ENST00000580540 PXDNQ92626 1479 aa23.87■■□□□ 1.41
SREBF1-219ENST00000580540 PSME1Q06323 249 aa23.85■■□□□ 1.41
SREBF1-219ENST00000580540 ZNF772Q68DY9 489 aaPredicted RBP23.85■■□□□ 1.41
SREBF1-219ENST00000580540 ADGRB2O60241 1585 aa23.85■■□□□ 1.41
SREBF1-219ENST00000580540 KIF1AQ12756 1690 aa23.85■■□□□ 1.41
SREBF1-219ENST00000580540 EIF3AQ14152 1382 aaKnown RBP23.84■■□□□ 1.41
SREBF1-219ENST00000580540 ANKARQ7Z5J8 1434 aa23.84■■□□□ 1.41
SREBF1-219ENST00000580540 AFF2P51816 1311 aa23.83■■□□□ 1.4
SREBF1-219ENST00000580540 PRR36Q9H6K5 1346 aa23.83■■□□□ 1.4
SREBF1-219ENST00000580540 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
SREBF1-219ENST00000580540 LMOD2Q6P5Q4 547 aa23.82■■□□□ 1.4
SREBF1-219ENST00000580540 NGLY1Q96IV0 654 aa23.82■■□□□ 1.4
SREBF1-219ENST00000580540 CDK19Q9BWU1 502 aa23.81■■□□□ 1.4
SREBF1-219ENST00000580540 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
SREBF1-219ENST00000580540 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
SREBF1-219ENST00000580540 SPATA31A3Q5VYP0 1347 aa23.8■■□□□ 1.4
SREBF1-219ENST00000580540 TULP4Q9NRJ4 1543 aa23.79■■□□□ 1.4
SREBF1-219ENST00000580540 NUDT16Q96DE0 195 aaKnown RBP23.79■■□□□ 1.4
SREBF1-219ENST00000580540 CENPJQ9HC77 1338 aaPredicted RBP23.79■■□□□ 1.4
SREBF1-219ENST00000580540 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
SREBF1-219ENST00000580540 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
SREBF1-219ENST00000580540 NGDNQ8NEJ9 315 aaKnown RBP23.78■■□□□ 1.4
SREBF1-219ENST00000580540 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
SREBF1-219ENST00000580540 HAP1P54257 671 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-219ENST00000580540 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
SREBF1-219ENST00000580540 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
SREBF1-219ENST00000580540 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
SREBF1-219ENST00000580540 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
SREBF1-219ENST00000580540 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
SREBF1-219ENST00000580540 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
SREBF1-219ENST00000580540 RXRBP28702 533 aa23.72■■□□□ 1.39
SREBF1-219ENST00000580540 CABLES1Q8TDN4 633 aa23.72■■□□□ 1.39
SREBF1-219ENST00000580540 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
SREBF1-219ENST00000580540 PAK3O75914 559 aaPredicted RBP23.71■■□□□ 1.39
SREBF1-219ENST00000580540 USP21Q9UK80 565 aa23.71■■□□□ 1.39
SREBF1-219ENST00000580540 ATP7BP35670 1465 aa23.7■■□□□ 1.38
SREBF1-219ENST00000580540 CABP2Q9NPB3 220 aa23.7■■□□□ 1.38
SREBF1-219ENST00000580540 CCDC61Q9Y6R9 512 aa23.7■■□□□ 1.38
SREBF1-219ENST00000580540 ARHGEF10O15013 1369 aa23.68■■□□□ 1.38
SREBF1-219ENST00000580540 CARD11Q9BXL7 1154 aa23.68■■□□□ 1.38
SREBF1-219ENST00000580540 QRICH2Q9H0J4 1663 aa23.67■■□□□ 1.38
SREBF1-219ENST00000580540 FNBP4Q8N3X1 1017 aaPredicted RBP23.66■■□□□ 1.38
SREBF1-219ENST00000580540 ITSN1Q15811 1721 aa23.66■■□□□ 1.38
SREBF1-219ENST00000580540 ACEP12821 1306 aa23.65■■□□□ 1.38
SREBF1-219ENST00000580540 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
SREBF1-219ENST00000580540 EVC2Q86UK5 1308 aa23.63■■□□□ 1.37
SREBF1-219ENST00000580540 TRPC5Q9UL62 973 aaPredicted RBP23.63■■□□□ 1.37
SREBF1-219ENST00000580540 PLEKHG3A1L390 1219 aa23.62■■□□□ 1.37
SREBF1-219ENST00000580540 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
SREBF1-219ENST00000580540 PPIP5K1Q6PFW1 1433 aa23.61■■□□□ 1.37
SREBF1-219ENST00000580540 MARF1Q9Y4F3 1742 aaKnown RBP23.6■■□□□ 1.37
SREBF1-219ENST00000580540 NUTM2GQ5VZR2 741 aa23.59■■□□□ 1.37
SREBF1-219ENST00000580540 CABP1Q9NZU7 370 aa23.59■■□□□ 1.37
SREBF1-219ENST00000580540 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.37
SREBF1-219ENST00000580540 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms