RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
CSNK1D-212ENST00000580061 TMEM94Q12767 1356 aa22.37■■□□□ 1.17
CSNK1D-212ENST00000580061 SBNO2Q9Y2G9 1366 aa22.37■■□□□ 1.17
CSNK1D-212ENST00000580061 TESK2Q96S53 571 aa22.36■■□□□ 1.17
CSNK1D-212ENST00000580061 NCOA3Q9Y6Q9 1424 aa22.36■■□□□ 1.17
CSNK1D-212ENST00000580061 ADGRB2O60241 1585 aa22.35■■□□□ 1.17
CSNK1D-212ENST00000580061 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-212ENST00000580061 ADGRL3Q9HAR2 1447 aa22.33■■□□□ 1.17
CSNK1D-212ENST00000580061 MINK1Q8N4C8 1332 aaPredicted RBP22.32■■□□□ 1.16
CSNK1D-212ENST00000580061 TULP4Q9NRJ4 1543 aa22.31■■□□□ 1.16
CSNK1D-212ENST00000580061 CDC42BPGQ6DT37 1551 aa22.29■■□□□ 1.16
CSNK1D-212ENST00000580061 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
CSNK1D-212ENST00000580061 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
CSNK1D-212ENST00000580061 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
CSNK1D-212ENST00000580061 FMN2Q9NZ56 1722 aa22.27■■□□□ 1.16
CSNK1D-212ENST00000580061 TMF1P82094 1093 aa22.26■■□□□ 1.15
CSNK1D-212ENST00000580061 EVC2Q86UK5 1308 aa22.26■■□□□ 1.15
CSNK1D-212ENST00000580061 MSH6P52701 1360 aa22.25■■□□□ 1.15
CSNK1D-212ENST00000580061 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
CSNK1D-212ENST00000580061 DCCP43146 1447 aa22.25■■□□□ 1.15
CSNK1D-212ENST00000580061 WASLO00401 505 aaPredicted RBP22.25■■□□□ 1.15
CSNK1D-212ENST00000580061 CDK19Q9BWU1 502 aa22.23■■□□□ 1.15
CSNK1D-212ENST00000580061 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
CSNK1D-212ENST00000580061 USP32Q8NFA0 1604 aa22.21■■□□□ 1.15
CSNK1D-212ENST00000580061 C11orf95C9JLR9 678 aaPredicted RBP22.21■■□□□ 1.15
CSNK1D-212ENST00000580061 IQSEC2Q5JU85 1478 aa22.21■■□□□ 1.15
CSNK1D-212ENST00000580061 ATF3P18847 181 aa22.19■■□□□ 1.14
CSNK1D-212ENST00000580061 SRPK2P78362 688 aaKnown RBP22.19■■□□□ 1.14
CSNK1D-212ENST00000580061 CABP2Q9NPB3 220 aa22.19■■□□□ 1.14
CSNK1D-212ENST00000580061 CDCA8Q53HL2 280 aa22.18■■□□□ 1.14
CSNK1D-212ENST00000580061 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
CSNK1D-212ENST00000580061 PUS7Q96PZ0 661 aaKnown RBP22.18■■□□□ 1.14
CSNK1D-212ENST00000580061 ITSN1Q15811 1721 aa22.17■■□□□ 1.14
CSNK1D-212ENST00000580061 ATP7BP35670 1465 aa22.17■■□□□ 1.14
CSNK1D-212ENST00000580061 ANKARQ7Z5J8 1434 aa22.17■■□□□ 1.14
CSNK1D-212ENST00000580061 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
CSNK1D-212ENST00000580061 CERKQ8TCT0 537 aa22.16■■□□□ 1.14
CSNK1D-212ENST00000580061 MST1RQ04912 1400 aa22.15■■□□□ 1.14
CSNK1D-212ENST00000580061 KIF7Q2M1P5 1343 aa22.15■■□□□ 1.14
CSNK1D-212ENST00000580061 PRR36Q9H6K5 1346 aa22.15■■□□□ 1.14
CSNK1D-212ENST00000580061 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
CSNK1D-212ENST00000580061 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
CSNK1D-212ENST00000580061 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
CSNK1D-212ENST00000580061 MYOM1P52179 1685 aa22.14■■□□□ 1.14
CSNK1D-212ENST00000580061 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.14
CSNK1D-212ENST00000580061 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
CSNK1D-212ENST00000580061 ATAD2Q6PL18 1390 aa22.13■■□□□ 1.13
CSNK1D-212ENST00000580061 C1orf167Q5SNV9 1468 aa22.13■■□□□ 1.13
CSNK1D-212ENST00000580061 CCDC61Q9Y6R9 512 aa22.11■■□□□ 1.13
CSNK1D-212ENST00000580061 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
CSNK1D-212ENST00000580061 PPIP5K1Q6PFW1 1433 aa22.08■■□□□ 1.13
CSNK1D-212ENST00000580061 SLAIN2Q9P270 581 aa22.08■■□□□ 1.13
CSNK1D-212ENST00000580061 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
CSNK1D-212ENST00000580061 NINLQ9Y2I6 1382 aa22.07■■□□□ 1.12
CSNK1D-212ENST00000580061 ORAI2Q96SN7 254 aa22.06■■□□□ 1.12
CSNK1D-212ENST00000580061 AKAP12Q02952 1782 aa22.05■■□□□ 1.12
CSNK1D-212ENST00000580061 TOM1O60784 492 aa22.05■■□□□ 1.12
CSNK1D-212ENST00000580061 ESCO1Q5FWF5 840 aa22.05■■□□□ 1.12
CSNK1D-212ENST00000580061 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
CSNK1D-212ENST00000580061 CABP1Q9NZU7 370 aa22.05■■□□□ 1.12
CSNK1D-212ENST00000580061 PLEKHG3A1L390 1219 aa22.04■■□□□ 1.12
CSNK1D-212ENST00000580061 SLC12A5Q9H2X9 1139 aa22.04■■□□□ 1.12
CSNK1D-212ENST00000580061 PHF8Q9UPP1 1060 aa22.03■■□□□ 1.12
CSNK1D-212ENST00000580061 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
CSNK1D-212ENST00000580061 ROBO1Q9Y6N7 1651 aa22.02■■□□□ 1.12
CSNK1D-212ENST00000580061 UBAP1LF5GYI3 381 aa22.02■■□□□ 1.12
CSNK1D-212ENST00000580061 PMFBP1Q8TBY8 1022 aa22.02■■□□□ 1.12
CSNK1D-212ENST00000580061 BRINP3Q76B58 766 aa22.01■■□□□ 1.11
CSNK1D-212ENST00000580061 POLR3AO14802 1390 aaPredicted RBP22■■□□□ 1.11
CSNK1D-212ENST00000580061 MON2Q7Z3U7 1717 aa22■■□□□ 1.11
CSNK1D-212ENST00000580061 ACEP12821 1306 aa22■■□□□ 1.11
CSNK1D-212ENST00000580061 CPSF1Q10570 1443 aaKnown RBP21.99■■□□□ 1.11
CSNK1D-212ENST00000580061 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
CSNK1D-212ENST00000580061 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
CSNK1D-212ENST00000580061 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
CSNK1D-212ENST00000580061 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
CSNK1D-212ENST00000580061 A0A1W2PP64 1363 aa21.97■■□□□ 1.11
CSNK1D-212ENST00000580061 FOXO3O43524 673 aa21.95■■□□□ 1.1
CSNK1D-212ENST00000580061 HDGFL2Q7Z4V5 671 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-212ENST00000580061 ZNF692Q9BU19 519 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-212ENST00000580061 PANK3Q9H999 370 aa21.95■■□□□ 1.1
CSNK1D-212ENST00000580061 NRKQ7Z2Y5 1582 aa21.95■■□□□ 1.1
CSNK1D-212ENST00000580061 PIP4K2BP78356 416 aa21.94■■□□□ 1.1
CSNK1D-212ENST00000580061 USP6P35125 1406 aa21.93■■□□□ 1.1
CSNK1D-212ENST00000580061 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-212ENST00000580061 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-212ENST00000580061 AHDC1Q5TGY3 1603 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-212ENST00000580061 NPHP3Q7Z494 1330 aa21.92■■□□□ 1.1
CSNK1D-212ENST00000580061 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-212ENST00000580061 PSME1Q06323 249 aa21.91■■□□□ 1.1
CSNK1D-212ENST00000580061 DDX17Q92841 729 aaKnown RBP21.91■■□□□ 1.1
CSNK1D-212ENST00000580061 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
CSNK1D-212ENST00000580061 PXDNQ92626 1479 aa21.9■■□□□ 1.1
CSNK1D-212ENST00000580061 SSH2Q76I76 1423 aa21.9■■□□□ 1.1
CSNK1D-212ENST00000580061 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-212ENST00000580061 KRT28Q7Z3Y7 464 aa21.89■■□□□ 1.09
CSNK1D-212ENST00000580061 PHLPP1O60346 1717 aa21.89■■□□□ 1.09
CSNK1D-212ENST00000580061 EDC4Q6P2E9 1401 aaKnown RBP21.89■■□□□ 1.09
CSNK1D-212ENST00000580061 NSD3Q9BZ95 1437 aa21.89■■□□□ 1.09
CSNK1D-212ENST00000580061 BRD4O60885 1362 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms