RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 VSIG10Q8N0Z9 540 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 ABCC8Q09428 1581 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 ANKRD18AQ8IVF6 992 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 ERCC4Q92889 916 aaPredicted RBP6.16□□□□□ -1.42
NF1-219ENST00000579081 INSRP06213 1382 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 EIF2S2P20042 333 aaKnown RBP6.16□□□□□ -1.42
NF1-219ENST00000579081 PLCD4Q9BRC7 762 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 H0YHG0 523 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 CCDC97Q96F63 343 aaPredicted RBP6.15□□□□□ -1.42
NF1-219ENST00000579081 LETM1O95202 739 aaPredicted RBP6.15□□□□□ -1.42
NF1-219ENST00000579081 DDX58O95786 925 aaKnown RBP6.15□□□□□ -1.42
NF1-219ENST00000579081 SYCP1Q15431 976 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 CCDC73Q6ZRK6 1079 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 ANKRD62A6NC57 917 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.15□□□□□ -1.42
NF1-219ENST00000579081 ERICH3Q5RHP9 1530 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 FYB1O15117 783 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 VPS8Q8N3P4 1428 aa6.15□□□□□ -1.42
NF1-219ENST00000579081 ERCC6Q03468 1493 aa6.15□□□□□ -1.43
NF1-219ENST00000579081 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.43
NF1-219ENST00000579081 G3BP1Q13283 466 aaKnown RBP eCLIP6.15□□□□□ -1.43
NF1-219ENST00000579081 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.43
NF1-219ENST00000579081 IPO9Q96P70 1041 aaKnown RBP6.15□□□□□ -1.43
NF1-219ENST00000579081 CCDC27Q2M243 656 aa6.15□□□□□ -1.43
NF1-219ENST00000579081 OLFM4Q6UX06 510 aa6.15□□□□□ -1.43
NF1-219ENST00000579081 TACO1Q9BSH4 297 aaKnown RBP6.15□□□□□ -1.43
NF1-219ENST00000579081 FMN1Q68DA7 1419 aa6.15□□□□□ -1.43
NF1-219ENST00000579081 XBP1P17861 261 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 INCENPQ9NQS7 918 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 NUTM2DQ5VT03 806 aaPredicted RBP6.14□□□□□ -1.43
NF1-219ENST00000579081 SLC4A3P48751 1232 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 FOSBP53539 338 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 PDILTQ8N807 584 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 MTMR7Q9Y216 660 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 VPS37CA5D8V6 355 aaPredicted RBP6.14□□□□□ -1.43
NF1-219ENST00000579081 COG3Q96JB2 828 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 RALYLQ86SE5 291 aaKnown RBP6.14□□□□□ -1.43
NF1-219ENST00000579081 PDCL3Q9H2J4 239 aa6.14□□□□□ -1.43
NF1-219ENST00000579081 EFCAB2Q5VUJ9 269 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 KIF27Q86VH2 1401 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 REC8O95072 547 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 SSR1P43307 286 aaKnown RBP6.13□□□□□ -1.43
NF1-219ENST00000579081 SEPT7Q16181 437 aaKnown RBP6.13□□□□□ -1.43
NF1-219ENST00000579081 WASHC4Q2M389 1173 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 HS1BP3Q53T59 392 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 CDK5RAP3Q96JB5 506 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 KIF3BO15066 747 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 NEBLO76041 1014 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 RNF214Q8ND24 703 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
NF1-219ENST00000579081 ERLIN2O94905 339 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 KRT18P05783 430 aaKnown RBP6.12□□□□□ -1.43
NF1-219ENST00000579081 HMGB2P26583 209 aaKnown RBP6.12□□□□□ -1.43
NF1-219ENST00000579081 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 EZRP15311 586 aaKnown RBP6.12□□□□□ -1.43
NF1-219ENST00000579081 PPM1FP49593 454 aaPredicted RBP6.12□□□□□ -1.43
NF1-219ENST00000579081 RSPH4AQ5TD94 716 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 ZKSCAN2Q63HK3 967 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 KIF21BO75037 1637 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 TTLL5Q6EMB2 1281 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 MAGEC2Q9UBF1 373 aaPredicted RBP6.12□□□□□ -1.43
NF1-219ENST00000579081 RRP7AQ9Y3A4 280 aaKnown RBP6.12□□□□□ -1.43
NF1-219ENST00000579081 UACAQ9BZF9 1416 aa6.12□□□□□ -1.43
NF1-219ENST00000579081 HSP90AB4PQ58FF6 505 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 ZHX1Q9UKY1 873 aaPredicted RBP6.11□□□□□ -1.43
NF1-219ENST00000579081 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
NF1-219ENST00000579081 MCM3P25205 808 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 SMARCE1Q969G3 411 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 NEUROD6Q96NK8 337 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 CIZ1Q9ULV3 898 aaPredicted RBP6.11□□□□□ -1.43
NF1-219ENST00000579081 FILIP1LQ4L180 1135 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 NAT10Q9H0A0 1025 aaKnown RBP6.11□□□□□ -1.43
NF1-219ENST00000579081 FAM13BQ9NYF5 915 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 CGNL1Q0VF96 1302 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 PLCD3Q8N3E9 789 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 ZMYM4Q5VZL5 1548 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 SF3B2Q13435 895 aaKnown RBP6.11□□□□□ -1.43
NF1-219ENST00000579081 NUTM1Q86Y26 1132 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 CHMP5Q9NZZ3 219 aa6.11□□□□□ -1.43
NF1-219ENST00000579081 GOLGA6L7A0A1B0GV03 622 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 ERC2O15083 957 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 NECTIN2Q92692 538 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 API5Q9BZZ5 524 aaKnown RBP6.1□□□□□ -1.43
NF1-219ENST00000579081 TRAK1Q9UPV9 953 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 USH1CQ9Y6N9 552 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 KDM4AO75164 1064 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 MCM2P49736 904 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 SART3Q15020 963 aaKnown RBP6.1□□□□□ -1.43
NF1-219ENST00000579081 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.435e-6■■■■□ 24.4
NF1-219ENST00000579081 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
NF1-219ENST00000579081 FAM161AQ3B820 660 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 HSP90AB3PQ58FF7 597 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 CENPQQ7L2Z9 268 aaPredicted RBP6.1□□□□□ -1.43
NF1-219ENST00000579081 DESP17661 470 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 TXLNAP40222 546 aa6.1□□□□□ -1.43
NF1-219ENST00000579081 NUP155O75694 1391 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 SLC3A2P08195 630 aaKnown RBP6.09□□□□□ -1.43
NF1-219ENST00000579081 PIP4K2AP48426 406 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms