RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 SIRT1Q96EB6 747 aa21.34■■□□□ 1.01
CCDC57-212ENST00000578910 YTHDC2Q9H6S0 1430 aaKnown RBP21.34■■□□□ 1.01
CCDC57-212ENST00000578910 PLEKHH1Q9ULM0 1364 aa21.34■■□□□ 1.01
CCDC57-212ENST00000578910 NRXN1Q9ULB1 1477 aa21.32■■□□□ 1
CCDC57-212ENST00000578910 TECPR2O15040 1411 aa21.32■■□□□ 1
CCDC57-212ENST00000578910 NUTM2FA1L443 756 aa21.32■■□□□ 1
CCDC57-212ENST00000578910 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
CCDC57-212ENST00000578910 MEX3CQ5U5Q3 659 aaKnown RBP21.32■■□□□ 1
CCDC57-212ENST00000578910 DHX57Q6P158 1386 aaKnown RBP21.32■■□□□ 1
CCDC57-212ENST00000578910 LRP6O75581 1613 aa21.31■■□□□ 1
CCDC57-212ENST00000578910 MYOM2P54296 1465 aa21.3■■□□□ 1
CCDC57-212ENST00000578910 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
CCDC57-212ENST00000578910 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
CCDC57-212ENST00000578910 SHPRHQ149N8 1683 aa21.28■■□□□ 1
CCDC57-212ENST00000578910 STAC3Q96MF2 364 aa21.27■■□□□ 1
CCDC57-212ENST00000578910 FOXO3O43524 673 aa21.26■□□□□ 0.99
CCDC57-212ENST00000578910 SAFB2Q14151 953 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCDC57-212ENST00000578910 PRAM1Q96QH2 718 aa21.26■□□□□ 0.99
CCDC57-212ENST00000578910 PNPLA6Q8IY17 1366 aa21.25■□□□□ 0.99
CCDC57-212ENST00000578910 POGKQ9P215 609 aa21.24■□□□□ 0.99
CCDC57-212ENST00000578910 TRAK1Q9UPV9 953 aa21.24■□□□□ 0.99
CCDC57-212ENST00000578910 ZNF772Q68DY9 489 aaPredicted RBP21.23■□□□□ 0.99
CCDC57-212ENST00000578910 KNDC1Q76NI1 1749 aa21.23■□□□□ 0.99
CCDC57-212ENST00000578910 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
CCDC57-212ENST00000578910 NPHP3Q7Z494 1330 aa21.22■□□□□ 0.99
CCDC57-212ENST00000578910 CDC42BPGQ6DT37 1551 aa21.22■□□□□ 0.99
CCDC57-212ENST00000578910 LAMC1P11047 1609 aa21.2■□□□□ 0.98
CCDC57-212ENST00000578910 ADAMTS2O95450 1211 aa21.19■□□□□ 0.98
CCDC57-212ENST00000578910 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
CCDC57-212ENST00000578910 AFF2P51816 1311 aa21.18■□□□□ 0.98
CCDC57-212ENST00000578910 ADGRB1O14514 1584 aa21.16■□□□□ 0.98
CCDC57-212ENST00000578910 KRT28Q7Z3Y7 464 aa21.16■□□□□ 0.98
CCDC57-212ENST00000578910 NGLY1Q96IV0 654 aa21.16■□□□□ 0.98
CCDC57-212ENST00000578910 HIRIP3Q9BW71 556 aaPredicted RBP21.15■□□□□ 0.98
CCDC57-212ENST00000578910 PHF8Q9UPP1 1060 aa21.15■□□□□ 0.98
CCDC57-212ENST00000578910 RXRBP28702 533 aa21.14■□□□□ 0.97
CCDC57-212ENST00000578910 QTRT2Q9H974 415 aaKnown RBP21.14■□□□□ 0.97
CCDC57-212ENST00000578910 FMN2Q9NZ56 1722 aa21.14■□□□□ 0.97
CCDC57-212ENST00000578910 DLC1Q96QB1 1528 aa21.14■□□□□ 0.97
CCDC57-212ENST00000578910 PXDNQ92626 1479 aa21.13■□□□□ 0.97
CCDC57-212ENST00000578910 MINK1Q8N4C8 1332 aaPredicted RBP21.13■□□□□ 0.97
CCDC57-212ENST00000578910 SIN3AQ96ST3 1273 aa21.12■□□□□ 0.97
CCDC57-212ENST00000578910 PMFBP1Q8TBY8 1022 aa21.11■□□□□ 0.97
CCDC57-212ENST00000578910 RGPD8O14715 1765 aaPredicted RBP21.1■□□□□ 0.97
CCDC57-212ENST00000578910 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
CCDC57-212ENST00000578910 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
CCDC57-212ENST00000578910 WASLO00401 505 aaPredicted RBP21.09■□□□□ 0.97
CCDC57-212ENST00000578910 PSME1Q06323 249 aa21.09■□□□□ 0.97
CCDC57-212ENST00000578910 L3MBTL2Q969R5 705 aa21.07■□□□□ 0.96
CCDC57-212ENST00000578910 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
CCDC57-212ENST00000578910 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
CCDC57-212ENST00000578910 USP21Q9UK80 565 aa21.06■□□□□ 0.96
CCDC57-212ENST00000578910 PRR36Q9H6K5 1346 aa21.05■□□□□ 0.96
CCDC57-212ENST00000578910 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
CCDC57-212ENST00000578910 COL22A1Q8NFW1 1626 aaPredicted RBP21.04■□□□□ 0.96
CCDC57-212ENST00000578910 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
CCDC57-212ENST00000578910 ANKARQ7Z5J8 1434 aa21.03■□□□□ 0.96
CCDC57-212ENST00000578910 KIF1AQ12756 1690 aa21.02■□□□□ 0.96
CCDC57-212ENST00000578910 PLEKHG5O94827 1062 aa21.02■□□□□ 0.96
CCDC57-212ENST00000578910 CABLES1Q8TDN4 633 aa21.02■□□□□ 0.96
CCDC57-212ENST00000578910 CDK19Q9BWU1 502 aa21.02■□□□□ 0.96
CCDC57-212ENST00000578910 USP32Q8NFA0 1604 aa21.01■□□□□ 0.95
CCDC57-212ENST00000578910 NUDT16Q96DE0 195 aaKnown RBP21.01■□□□□ 0.95
CCDC57-212ENST00000578910 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
CCDC57-212ENST00000578910 ADGRB2O60241 1585 aa21■□□□□ 0.95
CCDC57-212ENST00000578910 SBNO1A3KN83 1393 aa20.99■□□□□ 0.95
CCDC57-212ENST00000578910 NGDNQ8NEJ9 315 aaKnown RBP20.99■□□□□ 0.95
CCDC57-212ENST00000578910 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
CCDC57-212ENST00000578910 HAP1P54257 671 aaPredicted RBP20.97■□□□□ 0.95
CCDC57-212ENST00000578910 UPF1Q92900 1129 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC57-212ENST00000578910 TNS3Q68CZ2 1445 aa20.96■□□□□ 0.95
CCDC57-212ENST00000578910 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
CCDC57-212ENST00000578910 ARHGEF28Q8N1W1 1705 aaKnown RBP20.96■□□□□ 0.95
CCDC57-212ENST00000578910 KIAA1210Q9ULL0 1709 aa20.96■□□□□ 0.95
CCDC57-212ENST00000578910 BCL9LQ86UU0 1499 aa20.95■□□□□ 0.94
CCDC57-212ENST00000578910 TULP4Q9NRJ4 1543 aa20.95■□□□□ 0.94
CCDC57-212ENST00000578910 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
CCDC57-212ENST00000578910 GPRASP1Q5JY77 1395 aa20.95■□□□□ 0.94
CCDC57-212ENST00000578910 PAK3O75914 559 aaPredicted RBP20.93■□□□□ 0.94
CCDC57-212ENST00000578910 UNC5CLQ8IV45 518 aa20.92■□□□□ 0.94
CCDC57-212ENST00000578910 CCDC61Q9Y6R9 512 aa20.92■□□□□ 0.94
CCDC57-212ENST00000578910 ARHGEF10O15013 1369 aa20.92■□□□□ 0.94
CCDC57-212ENST00000578910 RGS12O14924 1447 aa20.92■□□□□ 0.94
CCDC57-212ENST00000578910 ATRNO75882 1429 aa20.92■□□□□ 0.94
CCDC57-212ENST00000578910 GJD4Q96KN9 370 aaPredicted RBP20.91■□□□□ 0.94
CCDC57-212ENST00000578910 CENPJQ9HC77 1338 aaPredicted RBP20.91■□□□□ 0.94
CCDC57-212ENST00000578910 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
CCDC57-212ENST00000578910 FAM83GA6ND36 823 aa20.9■□□□□ 0.94
CCDC57-212ENST00000578910 NBPF8Q3BBV2 869 aa20.9■□□□□ 0.94
CCDC57-212ENST00000578910 ACEP12821 1306 aa20.89■□□□□ 0.93
CCDC57-212ENST00000578910 PLEKHG3A1L390 1219 aa20.89■□□□□ 0.93
CCDC57-212ENST00000578910 CABP2Q9NPB3 220 aa20.89■□□□□ 0.93
CCDC57-212ENST00000578910 ATP7BP35670 1465 aa20.88■□□□□ 0.93
CCDC57-212ENST00000578910 SRPK2P78362 688 aaKnown RBP20.88■□□□□ 0.93
CCDC57-212ENST00000578910 SLIT2O94813 1529 aa20.88■□□□□ 0.93
CCDC57-212ENST00000578910 TRPM3Q9HCF6 1732 aaPredicted RBP20.86■□□□□ 0.93
CCDC57-212ENST00000578910 NUTM2GQ5VZR2 741 aa20.84■□□□□ 0.93
CCDC57-212ENST00000578910 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
CCDC57-212ENST00000578910 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.92
CCDC57-212ENST00000578910 VPS72Q15906 364 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms