RNA–Protein interactions for RNA: ENST00000578421.1

ACADVL-212, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-212ENST00000578421 POGKQ9P215 609 aa31.78■■■□□ 2.68
ACADVL-212ENST00000578421 DLC1Q96QB1 1528 aa31.78■■■□□ 2.68
ACADVL-212ENST00000578421 SAFB2Q14151 953 aaKnown RBP eCLIP31.77■■■□□ 2.68
ACADVL-212ENST00000578421 NBPF8Q3BBV2 869 aa31.76■■■□□ 2.67
ACADVL-212ENST00000578421 TRPM1Q7Z4N2 1603 aa31.71■■■□□ 2.67
ACADVL-212ENST00000578421 ROCK2O75116 1388 aaKnown RBP31.7■■■□□ 2.67
ACADVL-212ENST00000578421 MST1RQ04912 1400 aa31.7■■■□□ 2.67
ACADVL-212ENST00000578421 HSPA1LP34931 641 aa31.69■■■□□ 2.66
ACADVL-212ENST00000578421 ROBO1Q9Y6N7 1651 aa31.68■■■□□ 2.66
ACADVL-212ENST00000578421 CDC42BPGQ6DT37 1551 aa31.67■■■□□ 2.66
ACADVL-212ENST00000578421 ARHGEF28Q8N1W1 1705 aaKnown RBP31.65■■■□□ 2.66
ACADVL-212ENST00000578421 TIMELESSQ9UNS1 1208 aa31.64■■■□□ 2.66
ACADVL-212ENST00000578421 MINK1Q8N4C8 1332 aaPredicted RBP31.64■■■□□ 2.66
ACADVL-212ENST00000578421 C1orf167Q5SNV9 1468 aa31.63■■■□□ 2.65
ACADVL-212ENST00000578421 HIRIP3Q9BW71 556 aaPredicted RBP31.62■■■□□ 2.65
ACADVL-212ENST00000578421 NUTM2FA1L443 756 aa31.61■■■□□ 2.65
ACADVL-212ENST00000578421 BRINP3Q76B58 766 aa31.61■■■□□ 2.65
ACADVL-212ENST00000578421 RALGAPBQ86X10 1494 aa31.6■■■□□ 2.65
ACADVL-212ENST00000578421 GPRASP1Q5JY77 1395 aa31.58■■■□□ 2.65
ACADVL-212ENST00000578421 CARD11Q9BXL7 1154 aa31.57■■■□□ 2.64
ACADVL-212ENST00000578421 CENPJQ9HC77 1338 aaPredicted RBP31.55■■■□□ 2.64
ACADVL-212ENST00000578421 ORAI2Q96SN7 254 aa31.55■■■□□ 2.64
ACADVL-212ENST00000578421 ADGRB2O60241 1585 aa31.55■■■□□ 2.64
ACADVL-212ENST00000578421 FMN2Q9NZ56 1722 aa31.53■■■□□ 2.64
ACADVL-212ENST00000578421 ESCO1Q5FWF5 840 aa31.52■■■□□ 2.64
ACADVL-212ENST00000578421 EIF3AQ14152 1382 aaKnown RBP31.52■■■□□ 2.64
ACADVL-212ENST00000578421 WASLO00401 505 aaPredicted RBP31.5■■■□□ 2.63
ACADVL-212ENST00000578421 PHLPP1O60346 1717 aa31.48■■■□□ 2.63
ACADVL-212ENST00000578421 AHDC1Q5TGY3 1603 aaPredicted RBP31.47■■■□□ 2.63
ACADVL-212ENST00000578421 DDX17Q92841 729 aaKnown RBP31.47■■■□□ 2.63
ACADVL-212ENST00000578421 QRICH2Q9H0J4 1663 aa31.44■■■□□ 2.62
ACADVL-212ENST00000578421 ANKARQ7Z5J8 1434 aa31.43■■■□□ 2.62
ACADVL-212ENST00000578421 CDK19Q9BWU1 502 aa31.43■■■□□ 2.62
ACADVL-212ENST00000578421 TULP4Q9NRJ4 1543 aa31.42■■■□□ 2.62
ACADVL-212ENST00000578421 COL16A1Q07092 1604 aaPredicted RBP31.41■■■□□ 2.62
ACADVL-212ENST00000578421 NHSL1Q5SYE7 1610 aa31.4■■■□□ 2.62
ACADVL-212ENST00000578421 PRR36Q9H6K5 1346 aa31.4■■■□□ 2.62
ACADVL-212ENST00000578421 PHF8Q9UPP1 1060 aa31.39■■■□□ 2.62
ACADVL-212ENST00000578421 USP32Q8NFA0 1604 aa31.38■■■□□ 2.61
ACADVL-212ENST00000578421 FOXO3O43524 673 aa31.38■■■□□ 2.61
ACADVL-212ENST00000578421 SRPK2P78362 688 aaKnown RBP31.37■■■□□ 2.61
ACADVL-212ENST00000578421 RGPD8O14715 1765 aaPredicted RBP31.36■■■□□ 2.61
ACADVL-212ENST00000578421 NPHP3Q7Z494 1330 aa31.36■■■□□ 2.61
ACADVL-212ENST00000578421 NUDT16Q96DE0 195 aaKnown RBP31.36■■■□□ 2.61
ACADVL-212ENST00000578421 PMFBP1Q8TBY8 1022 aa31.35■■■□□ 2.61
ACADVL-212ENST00000578421 XPCQ01831 940 aaPredicted RBP31.34■■■□□ 2.61
ACADVL-212ENST00000578421 KIF1AQ12756 1690 aa31.34■■■□□ 2.61
ACADVL-212ENST00000578421 ATP7BP35670 1465 aa31.33■■■□□ 2.61
ACADVL-212ENST00000578421 JCADQ9P266 1359 aa31.33■■■□□ 2.61
ACADVL-212ENST00000578421 EVC2Q86UK5 1308 aa31.33■■■□□ 2.61
ACADVL-212ENST00000578421 CABP2Q9NPB3 220 aa31.33■■■□□ 2.61
ACADVL-212ENST00000578421 SOS2Q07890 1332 aaPredicted RBP31.32■■■□□ 2.6
ACADVL-212ENST00000578421 USP47Q96K76 1375 aa31.31■■■□□ 2.6
ACADVL-212ENST00000578421 LRRC59Q96AG4 307 aaKnown RBP31.31■■■□□ 2.6
ACADVL-212ENST00000578421 ST20-MTHFSA0A0A6YYL1 179 aa31.3■■■□□ 2.6
ACADVL-212ENST00000578421 SBNO2Q9Y2G9 1366 aa31.29■■■□□ 2.6
ACADVL-212ENST00000578421 PXDNQ92626 1479 aa31.27■■■□□ 2.6
ACADVL-212ENST00000578421 CCDC61Q9Y6R9 512 aa31.27■■■□□ 2.6
ACADVL-212ENST00000578421 KRT28Q7Z3Y7 464 aa31.26■■■□□ 2.59
ACADVL-212ENST00000578421 PSME1Q06323 249 aa31.25■■■□□ 2.59
ACADVL-212ENST00000578421 NGDNQ8NEJ9 315 aaKnown RBP31.25■■■□□ 2.59
ACADVL-212ENST00000578421 ITSN1Q15811 1721 aa31.24■■■□□ 2.59
ACADVL-212ENST00000578421 TESK2Q96S53 571 aa31.21■■■□□ 2.59
ACADVL-212ENST00000578421 TOPAZ1Q8N9V7 1692 aa31.21■■■□□ 2.59
ACADVL-212ENST00000578421 PPIP5K1Q6PFW1 1433 aa31.21■■■□□ 2.59
ACADVL-212ENST00000578421 PNPLA6Q8IY17 1366 aa31.2■■■□□ 2.59
ACADVL-212ENST00000578421 SHPRHQ149N8 1683 aa31.2■■■□□ 2.59
ACADVL-212ENST00000578421 MED1Q15648 1581 aaPredicted RBP31.19■■■□□ 2.58
ACADVL-212ENST00000578421 PLEKHG3A1L390 1219 aa31.18■■■□□ 2.58
ACADVL-212ENST00000578421 SPATA31A6Q5VVP1 1343 aa31.18■■■□□ 2.58
ACADVL-212ENST00000578421 CABP1Q9NZU7 370 aa31.16■■■□□ 2.58
ACADVL-212ENST00000578421 ACEP12821 1306 aa31.16■■■□□ 2.58
ACADVL-212ENST00000578421 ATAD2Q6PL18 1390 aa31.16■■■□□ 2.58
ACADVL-212ENST00000578421 NUTM2BA6NNL0 878 aaPredicted RBP31.15■■■□□ 2.58
ACADVL-212ENST00000578421 NUTM2EB1AL46 878 aaPredicted RBP31.15■■■□□ 2.58
ACADVL-212ENST00000578421 NUTM2AQ8IVF1 878 aaPredicted RBP31.15■■■□□ 2.58
ACADVL-212ENST00000578421 SPATA31A3Q5VYP0 1347 aa31.15■■■□□ 2.58
ACADVL-212ENST00000578421 SBNO1A3KN83 1393 aa31.14■■■□□ 2.58
ACADVL-212ENST00000578421 POLR3AO14802 1390 aaPredicted RBP31.14■■■□□ 2.58
ACADVL-212ENST00000578421 SLC24A1O60721 1099 aa31.13■■■□□ 2.57
ACADVL-212ENST00000578421 TNS3Q68CZ2 1445 aa31.13■■■□□ 2.57
ACADVL-212ENST00000578421 LMOD2Q6P5Q4 547 aa31.12■■■□□ 2.57
ACADVL-212ENST00000578421 EIF4G2P78344 907 aaKnown RBP eCLIP31.11■■■□□ 2.57
ACADVL-212ENST00000578421 LRP6O75581 1613 aa31.1■■■□□ 2.57
ACADVL-212ENST00000578421 DISP3Q9P2K9 1392 aa31.1■■■□□ 2.57
ACADVL-212ENST00000578421 PAK3O75914 559 aaPredicted RBP31.1■■■□□ 2.57
ACADVL-212ENST00000578421 TMF1P82094 1093 aa31.1■■■□□ 2.57
ACADVL-212ENST00000578421 MEX3CQ5U5Q3 659 aaKnown RBP31.08■■■□□ 2.57
ACADVL-212ENST00000578421 HSPA5P11021 654 aaKnown RBP31.07■■■□□ 2.56
ACADVL-212ENST00000578421 TMC1Q8TDI8 760 aa31.07■■■□□ 2.56
ACADVL-212ENST00000578421 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
ACADVL-212ENST00000578421 PLEKHG5O94827 1062 aa31.06■■■□□ 2.56
ACADVL-212ENST00000578421 TRPM3Q9HCF6 1732 aaPredicted RBP31.06■■■□□ 2.56
ACADVL-212ENST00000578421 ARHGEF10O15013 1369 aa31.05■■■□□ 2.56
ACADVL-212ENST00000578421 PUS7Q96PZ0 661 aaKnown RBP31.05■■■□□ 2.56
ACADVL-212ENST00000578421 COL22A1Q8NFW1 1626 aaPredicted RBP31.05■■■□□ 2.56
ACADVL-212ENST00000578421 ADAMTS2O95450 1211 aa31■■■□□ 2.55
ACADVL-212ENST00000578421 SLC12A5Q9H2X9 1139 aa31■■■□□ 2.55
ACADVL-212ENST00000578421 USP6P35125 1406 aa30.99■■■□□ 2.55
ACADVL-212ENST00000578421 CDCA8Q53HL2 280 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms