RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 ASXL1Q8IXJ9 1541 aa24.92■■□□□ 1.58
TMEM220-203ENST00000578345 ABCC11Q96J66 1382 aa24.92■■□□□ 1.58
TMEM220-203ENST00000578345 PTCH1Q13635 1447 aa24.91■■□□□ 1.58
TMEM220-203ENST00000578345 YTHDC2Q9H6S0 1430 aaKnown RBP24.9■■□□□ 1.58
TMEM220-203ENST00000578345 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
TMEM220-203ENST00000578345 SIRT1Q96EB6 747 aa24.89■■□□□ 1.58
TMEM220-203ENST00000578345 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
TMEM220-203ENST00000578345 PRAG1Q86YV5 1406 aa24.88■■□□□ 1.57
TMEM220-203ENST00000578345 ROBO2Q9HCK4 1378 aa24.87■■□□□ 1.57
TMEM220-203ENST00000578345 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
TMEM220-203ENST00000578345 TECPR2O15040 1411 aa24.85■■□□□ 1.57
TMEM220-203ENST00000578345 POGKQ9P215 609 aa24.83■■□□□ 1.57
TMEM220-203ENST00000578345 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
TMEM220-203ENST00000578345 TRAK1Q9UPV9 953 aa24.83■■□□□ 1.57
TMEM220-203ENST00000578345 WAPLQ7Z5K2 1190 aa24.82■■□□□ 1.56
TMEM220-203ENST00000578345 KIAA1210Q9ULL0 1709 aa24.82■■□□□ 1.56
TMEM220-203ENST00000578345 KNDC1Q76NI1 1749 aa24.8■■□□□ 1.56
TMEM220-203ENST00000578345 ADGRB1O14514 1584 aa24.8■■□□□ 1.56
TMEM220-203ENST00000578345 NBPF1Q3BBV0 1214 aa24.78■■□□□ 1.56
TMEM220-203ENST00000578345 DDX17Q92841 729 aaKnown RBP24.78■■□□□ 1.56
TMEM220-203ENST00000578345 PRAM1Q96QH2 718 aa24.78■■□□□ 1.56
TMEM220-203ENST00000578345 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
TMEM220-203ENST00000578345 DLC1Q96QB1 1528 aa24.76■■□□□ 1.55
TMEM220-203ENST00000578345 SAFB2Q14151 953 aaKnown RBP eCLIP24.74■■□□□ 1.55
TMEM220-203ENST00000578345 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
TMEM220-203ENST00000578345 ROCK2O75116 1388 aaKnown RBP24.74■■□□□ 1.55
TMEM220-203ENST00000578345 PLEKHH1Q9ULM0 1364 aa24.73■■□□□ 1.55
TMEM220-203ENST00000578345 NBPF8Q3BBV2 869 aa24.73■■□□□ 1.55
TMEM220-203ENST00000578345 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
TMEM220-203ENST00000578345 NUTM2BA6NNL0 878 aaPredicted RBP24.71■■□□□ 1.55
TMEM220-203ENST00000578345 NUTM2EB1AL46 878 aaPredicted RBP24.71■■□□□ 1.55
TMEM220-203ENST00000578345 NUTM2AQ8IVF1 878 aaPredicted RBP24.71■■□□□ 1.55
TMEM220-203ENST00000578345 TRPM1Q7Z4N2 1603 aa24.68■■□□□ 1.54
TMEM220-203ENST00000578345 ZNF772Q68DY9 489 aaPredicted RBP24.68■■□□□ 1.54
TMEM220-203ENST00000578345 ORAI2Q96SN7 254 aa24.68■■□□□ 1.54
TMEM220-203ENST00000578345 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
TMEM220-203ENST00000578345 LRRC59Q96AG4 307 aaKnown RBP24.67■■□□□ 1.54
TMEM220-203ENST00000578345 CARD11Q9BXL7 1154 aa24.67■■□□□ 1.54
TMEM220-203ENST00000578345 MINK1Q8N4C8 1332 aaPredicted RBP24.65■■□□□ 1.54
TMEM220-203ENST00000578345 AFF2P51816 1311 aa24.63■■□□□ 1.53
TMEM220-203ENST00000578345 EIF3AQ14152 1382 aaKnown RBP24.63■■□□□ 1.53
TMEM220-203ENST00000578345 SOS2Q07890 1332 aaPredicted RBP24.62■■□□□ 1.53
TMEM220-203ENST00000578345 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
TMEM220-203ENST00000578345 GPRASP1Q5JY77 1395 aa24.62■■□□□ 1.53
TMEM220-203ENST00000578345 ARHGEF28Q8N1W1 1705 aaKnown RBP24.61■■□□□ 1.53
TMEM220-203ENST00000578345 HIRIP3Q9BW71 556 aaPredicted RBP24.61■■□□□ 1.53
TMEM220-203ENST00000578345 RALGAPBQ86X10 1494 aa24.61■■□□□ 1.53
TMEM220-203ENST00000578345 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
TMEM220-203ENST00000578345 ESCO1Q5FWF5 840 aa24.6■■□□□ 1.53
TMEM220-203ENST00000578345 WASLO00401 505 aaPredicted RBP24.59■■□□□ 1.53
TMEM220-203ENST00000578345 C8orf37Q96NL8 207 aa24.57■■□□□ 1.52
TMEM220-203ENST00000578345 CDK12Q9NYV4 1490 aaPredicted RBP24.57■■□□□ 1.52
TMEM220-203ENST00000578345 COL22A1Q8NFW1 1626 aaPredicted RBP24.57■■□□□ 1.52
TMEM220-203ENST00000578345 RXRBP28702 533 aa24.56■■□□□ 1.52
TMEM220-203ENST00000578345 PXDNQ92626 1479 aa24.56■■□□□ 1.52
TMEM220-203ENST00000578345 ADGRB2O60241 1585 aa24.54■■□□□ 1.52
TMEM220-203ENST00000578345 FMN2Q9NZ56 1722 aa24.54■■□□□ 1.52
TMEM220-203ENST00000578345 CDK19Q9BWU1 502 aa24.53■■□□□ 1.52
TMEM220-203ENST00000578345 ADAMTS2O95450 1211 aa24.52■■□□□ 1.52
TMEM220-203ENST00000578345 RGS12O14924 1447 aa24.52■■□□□ 1.52
TMEM220-203ENST00000578345 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
TMEM220-203ENST00000578345 UPF1Q92900 1129 aaKnown RBP eCLIP24.51■■□□□ 1.51
TMEM220-203ENST00000578345 SLC24A1O60721 1099 aa24.5■■□□□ 1.51
TMEM220-203ENST00000578345 EVC2Q86UK5 1308 aa24.5■■□□□ 1.51
TMEM220-203ENST00000578345 SRPK2P78362 688 aaKnown RBP24.49■■□□□ 1.51
TMEM220-203ENST00000578345 PHF8Q9UPP1 1060 aa24.49■■□□□ 1.51
TMEM220-203ENST00000578345 NPHP3Q7Z494 1330 aa24.49■■□□□ 1.51
TMEM220-203ENST00000578345 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
TMEM220-203ENST00000578345 FOXO3O43524 673 aa24.47■■□□□ 1.51
TMEM220-203ENST00000578345 NUDT16Q96DE0 195 aaKnown RBP24.47■■□□□ 1.51
TMEM220-203ENST00000578345 QTRT2Q9H974 415 aaKnown RBP24.47■■□□□ 1.51
TMEM220-203ENST00000578345 QRICH2Q9H0J4 1663 aa24.46■■□□□ 1.51
TMEM220-203ENST00000578345 TULP4Q9NRJ4 1543 aa24.46■■□□□ 1.51
TMEM220-203ENST00000578345 NGLY1Q96IV0 654 aa24.46■■□□□ 1.51
TMEM220-203ENST00000578345 EP400Q96L91 3159 aa24.45■■□□□ 1.5
TMEM220-203ENST00000578345 RGPD8O14715 1765 aaPredicted RBP24.44■■□□□ 1.5
TMEM220-203ENST00000578345 RBM6P78332 1123 aaKnown RBP24.44■■□□□ 1.5
TMEM220-203ENST00000578345 CCDC61Q9Y6R9 512 aa24.44■■□□□ 1.5
TMEM220-203ENST00000578345 MARF1Q9Y4F3 1742 aaKnown RBP24.44■■□□□ 1.5
TMEM220-203ENST00000578345 KIF1AQ12756 1690 aa24.43■■□□□ 1.5
TMEM220-203ENST00000578345 PSME1Q06323 249 aa24.43■■□□□ 1.5
TMEM220-203ENST00000578345 PMFBP1Q8TBY8 1022 aa24.43■■□□□ 1.5
TMEM220-203ENST00000578345 SBNO2Q9Y2G9 1366 aa24.42■■□□□ 1.5
TMEM220-203ENST00000578345 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
TMEM220-203ENST00000578345 ST20-MTHFSA0A0A6YYL1 179 aa24.42■■□□□ 1.5
TMEM220-203ENST00000578345 NGDNQ8NEJ9 315 aaKnown RBP24.42■■□□□ 1.5
TMEM220-203ENST00000578345 CABP2Q9NPB3 220 aa24.42■■□□□ 1.5
TMEM220-203ENST00000578345 FNBP4Q8N3X1 1017 aaPredicted RBP24.41■■□□□ 1.5
TMEM220-203ENST00000578345 USP47Q96K76 1375 aa24.41■■□□□ 1.5
TMEM220-203ENST00000578345 KRT28Q7Z3Y7 464 aa24.4■■□□□ 1.5
TMEM220-203ENST00000578345 ATRNO75882 1429 aa24.4■■□□□ 1.5
TMEM220-203ENST00000578345 USP21Q9UK80 565 aa24.39■■□□□ 1.49
TMEM220-203ENST00000578345 USP32Q8NFA0 1604 aa24.38■■□□□ 1.49
TMEM220-203ENST00000578345 ATP7BP35670 1465 aa24.37■■□□□ 1.49
TMEM220-203ENST00000578345 BCL9LQ86UU0 1499 aa24.37■■□□□ 1.49
TMEM220-203ENST00000578345 ITSN1Q15811 1721 aa24.36■■□□□ 1.49
TMEM220-203ENST00000578345 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
TMEM220-203ENST00000578345 PLEKHG3A1L390 1219 aa24.35■■□□□ 1.49
TMEM220-203ENST00000578345 EIF4G2P78344 907 aaKnown RBP eCLIP24.34■■□□□ 1.49
TMEM220-203ENST00000578345 TRPC5Q9UL62 973 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms