RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 BRINP3Q76B58 766 aa32.06■■■□□ 2.72
SMARCD2-206ENST00000577990 RGS17Q9UGC6 210 aaPredicted RBP32.06■■■□□ 2.72
SMARCD2-206ENST00000577990 JCADQ9P266 1359 aa32.06■■■□□ 2.72
SMARCD2-206ENST00000577990 L3MBTL2Q969R5 705 aa32.05■■■□□ 2.72
SMARCD2-206ENST00000577990 WAPLQ7Z5K2 1190 aa32.02■■■□□ 2.72
SMARCD2-206ENST00000577990 SIRT1Q96EB6 747 aa32.02■■■□□ 2.72
SMARCD2-206ENST00000577990 KIAA1210Q9ULL0 1709 aa32.01■■■□□ 2.72
SMARCD2-206ENST00000577990 PLEKHH1Q9ULM0 1364 aa32.01■■■□□ 2.71
SMARCD2-206ENST00000577990 DLC1Q96QB1 1528 aa32■■■□□ 2.71
SMARCD2-206ENST00000577990 NHSL1Q5SYE7 1610 aa32■■■□□ 2.71
SMARCD2-206ENST00000577990 SHPRHQ149N8 1683 aa32■■■□□ 2.71
SMARCD2-206ENST00000577990 CDC42BPGQ6DT37 1551 aa31.96■■■□□ 2.71
SMARCD2-206ENST00000577990 LRP6O75581 1613 aa31.95■■■□□ 2.71
SMARCD2-206ENST00000577990 PRAM1Q96QH2 718 aa31.93■■■□□ 2.7
SMARCD2-206ENST00000577990 TRAK1Q9UPV9 953 aa31.93■■■□□ 2.7
SMARCD2-206ENST00000577990 DDX17Q92841 729 aaKnown RBP31.91■■■□□ 2.7
SMARCD2-206ENST00000577990 C1orf167Q5SNV9 1468 aa31.91■■■□□ 2.7
SMARCD2-206ENST00000577990 POGKQ9P215 609 aa31.9■■■□□ 2.7
SMARCD2-206ENST00000577990 TONSLQ96HA7 1378 aa31.9■■■□□ 2.7
SMARCD2-206ENST00000577990 POTEAQ6S8J7 498 aa31.89■■■□□ 2.7
SMARCD2-206ENST00000577990 SPATA31A6Q5VVP1 1343 aa31.88■■■□□ 2.69
SMARCD2-206ENST00000577990 SAFB2Q14151 953 aaKnown RBP eCLIP31.87■■■□□ 2.69
SMARCD2-206ENST00000577990 NBPF1Q3BBV0 1214 aa31.87■■■□□ 2.69
SMARCD2-206ENST00000577990 ARHGEF28Q8N1W1 1705 aaKnown RBP31.86■■■□□ 2.69
SMARCD2-206ENST00000577990 TRPM1Q7Z4N2 1603 aa31.84■■■□□ 2.69
SMARCD2-206ENST00000577990 FMN2Q9NZ56 1722 aa31.83■■■□□ 2.69
SMARCD2-206ENST00000577990 MEX3CQ5U5Q3 659 aaKnown RBP31.82■■■□□ 2.68
SMARCD2-206ENST00000577990 ORAI2Q96SN7 254 aa31.82■■■□□ 2.68
SMARCD2-206ENST00000577990 ADGRB2O60241 1585 aa31.81■■■□□ 2.68
SMARCD2-206ENST00000577990 NUTM2BA6NNL0 878 aaPredicted RBP31.8■■■□□ 2.68
SMARCD2-206ENST00000577990 NUTM2EB1AL46 878 aaPredicted RBP31.8■■■□□ 2.68
SMARCD2-206ENST00000577990 NUTM2AQ8IVF1 878 aaPredicted RBP31.8■■■□□ 2.68
SMARCD2-206ENST00000577990 CLSPNQ9HAW4 1339 aa31.78■■■□□ 2.68
SMARCD2-206ENST00000577990 NBPF8Q3BBV2 869 aa31.76■■■□□ 2.67
SMARCD2-206ENST00000577990 LRRC59Q96AG4 307 aaKnown RBP31.76■■■□□ 2.67
SMARCD2-206ENST00000577990 MINK1Q8N4C8 1332 aaPredicted RBP31.75■■■□□ 2.67
SMARCD2-206ENST00000577990 NUTM2FA1L443 756 aa31.75■■■□□ 2.67
SMARCD2-206ENST00000577990 ROCK2O75116 1388 aaKnown RBP31.74■■■□□ 2.67
SMARCD2-206ENST00000577990 PNPLA6Q8IY17 1366 aa31.74■■■□□ 2.67
SMARCD2-206ENST00000577990 ESCO1Q5FWF5 840 aa31.73■■■□□ 2.67
SMARCD2-206ENST00000577990 HIRIP3Q9BW71 556 aaPredicted RBP31.73■■■□□ 2.67
SMARCD2-206ENST00000577990 GPRASP1Q5JY77 1395 aa31.68■■■□□ 2.66
SMARCD2-206ENST00000577990 ANKARQ7Z5J8 1434 aa31.67■■■□□ 2.66
SMARCD2-206ENST00000577990 RALGAPBQ86X10 1494 aa31.67■■■□□ 2.66
SMARCD2-206ENST00000577990 CCER1Q8TC90 406 aaPredicted RBP31.67■■■□□ 2.66
SMARCD2-206ENST00000577990 SOS2Q07890 1332 aaPredicted RBP31.67■■■□□ 2.66
SMARCD2-206ENST00000577990 EIF3AQ14152 1382 aaKnown RBP31.67■■■□□ 2.66
SMARCD2-206ENST00000577990 RGPD8O14715 1765 aaPredicted RBP31.66■■■□□ 2.66
SMARCD2-206ENST00000577990 WASLO00401 505 aaPredicted RBP31.66■■■□□ 2.66
SMARCD2-206ENST00000577990 CENPJQ9HC77 1338 aaPredicted RBP31.66■■■□□ 2.66
SMARCD2-206ENST00000577990 KIF1AQ12756 1690 aa31.66■■■□□ 2.66
SMARCD2-206ENST00000577990 USP32Q8NFA0 1604 aa31.64■■■□□ 2.66
SMARCD2-206ENST00000577990 TULP4Q9NRJ4 1543 aa31.64■■■□□ 2.66
SMARCD2-206ENST00000577990 ZNF772Q68DY9 489 aaPredicted RBP31.63■■■□□ 2.65
SMARCD2-206ENST00000577990 NPHP3Q7Z494 1330 aa31.63■■■□□ 2.65
SMARCD2-206ENST00000577990 QRICH2Q9H0J4 1663 aa31.62■■■□□ 2.65
SMARCD2-206ENST00000577990 PXDNQ92626 1479 aa31.61■■■□□ 2.65
SMARCD2-206ENST00000577990 AFF2P51816 1311 aa31.61■■■□□ 2.65
SMARCD2-206ENST00000577990 XPCQ01831 940 aaPredicted RBP31.6■■■□□ 2.65
SMARCD2-206ENST00000577990 FOXO3O43524 673 aa31.59■■■□□ 2.65
SMARCD2-206ENST00000577990 C8orf37Q96NL8 207 aa31.59■■■□□ 2.65
SMARCD2-206ENST00000577990 TIMELESSQ9UNS1 1208 aa31.59■■■□□ 2.65
SMARCD2-206ENST00000577990 PHF8Q9UPP1 1060 aa31.59■■■□□ 2.65
SMARCD2-206ENST00000577990 COL22A1Q8NFW1 1626 aaPredicted RBP31.59■■■□□ 2.65
SMARCD2-206ENST00000577990 CARD11Q9BXL7 1154 aa31.58■■■□□ 2.65
SMARCD2-206ENST00000577990 PRR36Q9H6K5 1346 aa31.57■■■□□ 2.64
SMARCD2-206ENST00000577990 ADAMTS2O95450 1211 aa31.57■■■□□ 2.64
SMARCD2-206ENST00000577990 CDK19Q9BWU1 502 aa31.55■■■□□ 2.64
SMARCD2-206ENST00000577990 ATP7BP35670 1465 aa31.54■■■□□ 2.64
SMARCD2-206ENST00000577990 ITSN1Q15811 1721 aa31.52■■■□□ 2.64
SMARCD2-206ENST00000577990 PMFBP1Q8TBY8 1022 aa31.5■■■□□ 2.63
SMARCD2-206ENST00000577990 NUDT16Q96DE0 195 aaKnown RBP31.5■■■□□ 2.63
SMARCD2-206ENST00000577990 RXRBP28702 533 aa31.48■■■□□ 2.63
SMARCD2-206ENST00000577990 MARF1Q9Y4F3 1742 aaKnown RBP31.48■■■□□ 2.63
SMARCD2-206ENST00000577990 KRT28Q7Z3Y7 464 aa31.47■■■□□ 2.63
SMARCD2-206ENST00000577990 NGLY1Q96IV0 654 aa31.47■■■□□ 2.63
SMARCD2-206ENST00000577990 TOPAZ1Q8N9V7 1692 aa31.46■■■□□ 2.63
SMARCD2-206ENST00000577990 SRPK2P78362 688 aaKnown RBP31.45■■■□□ 2.63
SMARCD2-206ENST00000577990 PSME1Q06323 249 aa31.43■■■□□ 2.62
SMARCD2-206ENST00000577990 EVC2Q86UK5 1308 aa31.43■■■□□ 2.62
SMARCD2-206ENST00000577990 CABP2Q9NPB3 220 aa31.42■■■□□ 2.62
SMARCD2-206ENST00000577990 CCDC61Q9Y6R9 512 aa31.42■■■□□ 2.62
SMARCD2-206ENST00000577990 SBNO2Q9Y2G9 1366 aa31.42■■■□□ 2.62
SMARCD2-206ENST00000577990 QTRT2Q9H974 415 aaKnown RBP31.41■■■□□ 2.62
SMARCD2-206ENST00000577990 SPATA31A3Q5VYP0 1347 aa31.41■■■□□ 2.62
SMARCD2-206ENST00000577990 NGDNQ8NEJ9 315 aaKnown RBP31.4■■■□□ 2.62
SMARCD2-206ENST00000577990 SBNO1A3KN83 1393 aa31.4■■■□□ 2.62
SMARCD2-206ENST00000577990 TNS3Q68CZ2 1445 aa31.4■■■□□ 2.62
SMARCD2-206ENST00000577990 CDK12Q9NYV4 1490 aaPredicted RBP31.39■■■□□ 2.62
SMARCD2-206ENST00000577990 TRPM3Q9HCF6 1732 aaPredicted RBP31.37■■■□□ 2.61
SMARCD2-206ENST00000577990 RGS12O14924 1447 aa31.36■■■□□ 2.61
SMARCD2-206ENST00000577990 USP21Q9UK80 565 aa31.36■■■□□ 2.61
SMARCD2-206ENST00000577990 PPIP5K1Q6PFW1 1433 aa31.35■■■□□ 2.61
SMARCD2-206ENST00000577990 PLEKHG3A1L390 1219 aa31.35■■■□□ 2.61
SMARCD2-206ENST00000577990 POLR3AO14802 1390 aaPredicted RBP31.34■■■□□ 2.61
SMARCD2-206ENST00000577990 RBM6P78332 1123 aaKnown RBP31.34■■■□□ 2.61
SMARCD2-206ENST00000577990 ABCA3Q99758 1704 aa31.32■■■□□ 2.61
SMARCD2-206ENST00000577990 ACEP12821 1306 aa31.32■■■□□ 2.6
SMARCD2-206ENST00000577990 FNBP4Q8N3X1 1017 aaPredicted RBP31.32■■■□□ 2.6
SMARCD2-206ENST00000577990 ARHGEF10O15013 1369 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms