RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 MED1Q15648 1581 aaPredicted RBP28.18■■■□□ 2.1
NUP85-205ENST00000577561 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
NUP85-205ENST00000577561 PRAM1Q96QH2 718 aa28.17■■■□□ 2.1
NUP85-205ENST00000577561 COL16A1Q07092 1604 aaPredicted RBP28.17■■■□□ 2.1
NUP85-205ENST00000577561 L3MBTL2Q969R5 705 aa28.16■■■□□ 2.1
NUP85-205ENST00000577561 TRAK1Q9UPV9 953 aa28.16■■■□□ 2.1
NUP85-205ENST00000577561 JCADQ9P266 1359 aa28.13■■■□□ 2.09
NUP85-205ENST00000577561 ORAI2Q96SN7 254 aa28.13■■■□□ 2.09
NUP85-205ENST00000577561 POGKQ9P215 609 aa28.13■■■□□ 2.09
NUP85-205ENST00000577561 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
NUP85-205ENST00000577561 NHSL1Q5SYE7 1610 aa28.1■■■□□ 2.09
NUP85-205ENST00000577561 KIAA1210Q9ULL0 1709 aa28.1■■■□□ 2.09
NUP85-205ENST00000577561 DDX17Q92841 729 aaKnown RBP28.08■■■□□ 2.09
NUP85-205ENST00000577561 NUTM2FA1L443 756 aa28.06■■■□□ 2.08
NUP85-205ENST00000577561 NBPF1Q3BBV0 1214 aa28.06■■■□□ 2.08
NUP85-205ENST00000577561 ESCO1Q5FWF5 840 aa28.06■■■□□ 2.08
NUP85-205ENST00000577561 FMN2Q9NZ56 1722 aa28.05■■■□□ 2.08
NUP85-205ENST00000577561 LRRC59Q96AG4 307 aaKnown RBP28.04■■■□□ 2.08
NUP85-205ENST00000577561 PHF23Q9BUL5 403 aaPredicted RBP28.02■■■□□ 2.08
NUP85-205ENST00000577561 SOS2Q07890 1332 aaPredicted RBP28.01■■■□□ 2.07
NUP85-205ENST00000577561 SPATA31A6Q5VVP1 1343 aa28.01■■■□□ 2.07
NUP85-205ENST00000577561 SHPRHQ149N8 1683 aa28■■■□□ 2.07
NUP85-205ENST00000577561 ADGRB2O60241 1585 aa28■■■□□ 2.07
NUP85-205ENST00000577561 ARHGEF28Q8N1W1 1705 aaKnown RBP28■■■□□ 2.07
NUP85-205ENST00000577561 MINK1Q8N4C8 1332 aaPredicted RBP27.99■■■□□ 2.07
NUP85-205ENST00000577561 HIRIP3Q9BW71 556 aaPredicted RBP27.99■■■□□ 2.07
NUP85-205ENST00000577561 PCGF6Q9BYE7 350 aa27.99■■■□□ 2.07
NUP85-205ENST00000577561 NPHP3Q7Z494 1330 aa27.98■■■□□ 2.07
NUP85-205ENST00000577561 ILDR2Q71H61 639 aa27.98■■■□□ 2.07
NUP85-205ENST00000577561 FOXO3O43524 673 aa27.96■■■□□ 2.07
NUP85-205ENST00000577561 TONSLQ96HA7 1378 aa27.95■■■□□ 2.06
NUP85-205ENST00000577561 WASLO00401 505 aaPredicted RBP27.94■■■□□ 2.06
NUP85-205ENST00000577561 ANKARQ7Z5J8 1434 aa27.93■■■□□ 2.06
NUP85-205ENST00000577561 PNPLA6Q8IY17 1366 aa27.93■■■□□ 2.06
NUP85-205ENST00000577561 TRPM1Q7Z4N2 1603 aa27.92■■■□□ 2.06
NUP85-205ENST00000577561 EIF3AQ14152 1382 aaKnown RBP27.92■■■□□ 2.06
NUP85-205ENST00000577561 PHF8Q9UPP1 1060 aa27.92■■■□□ 2.06
NUP85-205ENST00000577561 RGPD8O14715 1765 aaPredicted RBP27.91■■■□□ 2.06
NUP85-205ENST00000577561 KIF1AQ12756 1690 aa27.91■■■□□ 2.06
NUP85-205ENST00000577561 PXDNQ92626 1479 aa27.91■■■□□ 2.06
NUP85-205ENST00000577561 NBPF8Q3BBV2 869 aa27.91■■■□□ 2.06
NUP85-205ENST00000577561 LRP6O75581 1613 aa27.91■■■□□ 2.06
NUP85-205ENST00000577561 RGS17Q9UGC6 210 aaPredicted RBP27.9■■■□□ 2.06
NUP85-205ENST00000577561 XPCQ01831 940 aaPredicted RBP27.89■■■□□ 2.06
NUP85-205ENST00000577561 USP32Q8NFA0 1604 aa27.89■■■□□ 2.05
NUP85-205ENST00000577561 ROCK2O75116 1388 aaKnown RBP27.88■■■□□ 2.05
NUP85-205ENST00000577561 NUTM2BA6NNL0 878 aaPredicted RBP27.88■■■□□ 2.05
NUP85-205ENST00000577561 NUTM2EB1AL46 878 aaPredicted RBP27.88■■■□□ 2.05
NUP85-205ENST00000577561 NUTM2AQ8IVF1 878 aaPredicted RBP27.88■■■□□ 2.05
NUP85-205ENST00000577561 TULP4Q9NRJ4 1543 aa27.87■■■□□ 2.05
NUP85-205ENST00000577561 PRR36Q9H6K5 1346 aa27.87■■■□□ 2.05
NUP85-205ENST00000577561 CENPJQ9HC77 1338 aaPredicted RBP27.87■■■□□ 2.05
NUP85-205ENST00000577561 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
NUP85-205ENST00000577561 KRT28Q7Z3Y7 464 aa27.84■■■□□ 2.05
NUP85-205ENST00000577561 PMFBP1Q8TBY8 1022 aa27.83■■■□□ 2.05
NUP85-205ENST00000577561 CDK19Q9BWU1 502 aa27.83■■■□□ 2.05
NUP85-205ENST00000577561 GPRASP1Q5JY77 1395 aa27.83■■■□□ 2.05
NUP85-205ENST00000577561 PSME1Q06323 249 aa27.8■■■□□ 2.04
NUP85-205ENST00000577561 NUDT16Q96DE0 195 aaKnown RBP27.8■■■□□ 2.04
NUP85-205ENST00000577561 SPATA31A3Q5VYP0 1347 aa27.8■■■□□ 2.04
NUP85-205ENST00000577561 CLSPNQ9HAW4 1339 aa27.79■■■□□ 2.04
NUP85-205ENST00000577561 COL22A1Q8NFW1 1626 aaPredicted RBP27.78■■■□□ 2.04
NUP85-205ENST00000577561 ATP7BP35670 1465 aa27.78■■■□□ 2.04
NUP85-205ENST00000577561 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.04
NUP85-205ENST00000577561 QRICH2Q9H0J4 1663 aa27.76■■■□□ 2.03
NUP85-205ENST00000577561 POTEAQ6S8J7 498 aa27.76■■■□□ 2.03
NUP85-205ENST00000577561 SBNO1A3KN83 1393 aa27.75■■■□□ 2.03
NUP85-205ENST00000577561 CARD11Q9BXL7 1154 aa27.75■■■□□ 2.03
NUP85-205ENST00000577561 CCDC61Q9Y6R9 512 aa27.74■■■□□ 2.03
NUP85-205ENST00000577561 TNS3Q68CZ2 1445 aa27.74■■■□□ 2.03
NUP85-205ENST00000577561 NGDNQ8NEJ9 315 aaKnown RBP27.73■■■□□ 2.03
NUP85-205ENST00000577561 ITSN1Q15811 1721 aa27.72■■■□□ 2.03
NUP85-205ENST00000577561 ADAMTS2O95450 1211 aa27.72■■■□□ 2.03
NUP85-205ENST00000577561 ZNF772Q68DY9 489 aaPredicted RBP27.72■■■□□ 2.03
NUP85-205ENST00000577561 SRPK2P78362 688 aaKnown RBP27.71■■■□□ 2.03
NUP85-205ENST00000577561 C8orf37Q96NL8 207 aa27.71■■■□□ 2.03
NUP85-205ENST00000577561 AFF2P51816 1311 aa27.69■■■□□ 2.02
NUP85-205ENST00000577561 SOCS7O14512 581 aa27.69■■■□□ 2.02
NUP85-205ENST00000577561 CABP2Q9NPB3 220 aa27.69■■■□□ 2.02
NUP85-205ENST00000577561 TIMELESSQ9UNS1 1208 aa27.69■■■□□ 2.02
NUP85-205ENST00000577561 PLEKHG3A1L390 1219 aa27.68■■■□□ 2.02
NUP85-205ENST00000577561 ARHGEF10O15013 1369 aa27.68■■■□□ 2.02
NUP85-205ENST00000577561 TOPAZ1Q8N9V7 1692 aa27.68■■■□□ 2.02
NUP85-205ENST00000577561 EVC2Q86UK5 1308 aa27.67■■■□□ 2.02
NUP85-205ENST00000577561 POLR3AO14802 1390 aaPredicted RBP27.66■■■□□ 2.02
NUP85-205ENST00000577561 LMOD2Q6P5Q4 547 aa27.66■■■□□ 2.02
NUP85-205ENST00000577561 NGLY1Q96IV0 654 aa27.66■■■□□ 2.02
NUP85-205ENST00000577561 TRPM3Q9HCF6 1732 aaPredicted RBP27.66■■■□□ 2.02
NUP85-205ENST00000577561 CCER1Q8TC90 406 aaPredicted RBP27.64■■■□□ 2.02
NUP85-205ENST00000577561 ACEP12821 1306 aa27.64■■■□□ 2.01
NUP85-205ENST00000577561 SBNO2Q9Y2G9 1366 aa27.62■■■□□ 2.01
NUP85-205ENST00000577561 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
NUP85-205ENST00000577561 PAK3O75914 559 aaPredicted RBP27.6■■■□□ 2.01
NUP85-205ENST00000577561 FNBP4Q8N3X1 1017 aaPredicted RBP27.6■■■□□ 2.01
NUP85-205ENST00000577561 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
NUP85-205ENST00000577561 ALS2Q96Q42 1657 aa27.59■■■□□ 2.01
NUP85-205ENST00000577561 HAP1P54257 671 aaPredicted RBP27.58■■■□□ 2.01
NUP85-205ENST00000577561 CABP1Q9NZU7 370 aa27.58■■■□□ 2.01
NUP85-205ENST00000577561 MARF1Q9Y4F3 1742 aaKnown RBP27.57■■■□□ 2
NUP85-205ENST00000577561 PLEKHG5O94827 1062 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms