RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 DCCP43146 1447 aa22.35■■□□□ 1.17
LITAF-218ENST00000576036 MSH6P52701 1360 aa22.35■■□□□ 1.17
LITAF-218ENST00000576036 RGPD8O14715 1765 aaPredicted RBP22.33■■□□□ 1.17
LITAF-218ENST00000576036 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.16
LITAF-218ENST00000576036 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
LITAF-218ENST00000576036 C19orf44Q9H6X5 657 aa22.32■■□□□ 1.16
LITAF-218ENST00000576036 USP32Q8NFA0 1604 aa22.31■■□□□ 1.16
LITAF-218ENST00000576036 ILDR1Q86SU0 546 aaPredicted RBP22.31■■□□□ 1.16
LITAF-218ENST00000576036 MST1RQ04912 1400 aa22.31■■□□□ 1.16
LITAF-218ENST00000576036 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
LITAF-218ENST00000576036 POGKQ9P215 609 aa22.29■■□□□ 1.16
LITAF-218ENST00000576036 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
LITAF-218ENST00000576036 TULP4Q9NRJ4 1543 aa22.27■■□□□ 1.16
LITAF-218ENST00000576036 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
LITAF-218ENST00000576036 MINK1Q8N4C8 1332 aaPredicted RBP22.27■■□□□ 1.16
LITAF-218ENST00000576036 UBAP1LF5GYI3 381 aa22.26■■□□□ 1.15
LITAF-218ENST00000576036 USP47Q96K76 1375 aa22.25■■□□□ 1.15
LITAF-218ENST00000576036 CADPS2Q86UW7 1296 aa22.24■■□□□ 1.15
LITAF-218ENST00000576036 HIRIP3Q9BW71 556 aaPredicted RBP22.24■■□□□ 1.15
LITAF-218ENST00000576036 EIF3AQ14152 1382 aaKnown RBP22.24■■□□□ 1.15
LITAF-218ENST00000576036 C1orf167Q5SNV9 1468 aa22.23■■□□□ 1.15
LITAF-218ENST00000576036 TOPAZ1Q8N9V7 1692 aa22.23■■□□□ 1.15
LITAF-218ENST00000576036 TOM1O60784 492 aa22.22■■□□□ 1.15
LITAF-218ENST00000576036 ATF3P18847 181 aa22.22■■□□□ 1.15
LITAF-218ENST00000576036 SBNO2Q9Y2G9 1366 aa22.22■■□□□ 1.15
LITAF-218ENST00000576036 SLAIN2Q9P270 581 aa22.2■■□□□ 1.14
LITAF-218ENST00000576036 ATP7BP35670 1465 aa22.19■■□□□ 1.14
LITAF-218ENST00000576036 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
LITAF-218ENST00000576036 ITSN1Q15811 1721 aa22.18■■□□□ 1.14
LITAF-218ENST00000576036 PRR36Q9H6K5 1346 aa22.18■■□□□ 1.14
LITAF-218ENST00000576036 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
LITAF-218ENST00000576036 WASLO00401 505 aaPredicted RBP22.18■■□□□ 1.14
LITAF-218ENST00000576036 TESK2Q96S53 571 aa22.18■■□□□ 1.14
LITAF-218ENST00000576036 ANKARQ7Z5J8 1434 aa22.16■■□□□ 1.14
LITAF-218ENST00000576036 PIP4K2BP78356 416 aa22.16■■□□□ 1.14
LITAF-218ENST00000576036 KIF1AQ12756 1690 aa22.15■■□□□ 1.14
LITAF-218ENST00000576036 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
LITAF-218ENST00000576036 AHDC1Q5TGY3 1603 aaPredicted RBP22.14■■□□□ 1.14
LITAF-218ENST00000576036 BRINP3Q76B58 766 aa22.14■■□□□ 1.13
LITAF-218ENST00000576036 CDK19Q9BWU1 502 aa22.14■■□□□ 1.13
LITAF-218ENST00000576036 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
LITAF-218ENST00000576036 PHLPP1O60346 1717 aa22.12■■□□□ 1.13
LITAF-218ENST00000576036 COL16A1Q07092 1604 aaPredicted RBP22.11■■□□□ 1.13
LITAF-218ENST00000576036 HSPA5P11021 654 aaKnown RBP22.11■■□□□ 1.13
LITAF-218ENST00000576036 DISP3Q9P2K9 1392 aa22.1■■□□□ 1.13
LITAF-218ENST00000576036 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
LITAF-218ENST00000576036 EVC2Q86UK5 1308 aa22.08■■□□□ 1.13
LITAF-218ENST00000576036 CABP2Q9NPB3 220 aa22.08■■□□□ 1.13
LITAF-218ENST00000576036 EIF4G2P78344 907 aaKnown RBP eCLIP22.07■■□□□ 1.12
LITAF-218ENST00000576036 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
LITAF-218ENST00000576036 MYOM1P52179 1685 aa22.07■■□□□ 1.12
LITAF-218ENST00000576036 AKAP12Q02952 1782 aa22.06■■□□□ 1.12
LITAF-218ENST00000576036 TRPM3Q9HCF6 1732 aaPredicted RBP22.06■■□□□ 1.12
LITAF-218ENST00000576036 PXDNQ92626 1479 aa22.05■■□□□ 1.12
LITAF-218ENST00000576036 ESCO1Q5FWF5 840 aa22.05■■□□□ 1.12
LITAF-218ENST00000576036 DDX17Q92841 729 aaKnown RBP22.05■■□□□ 1.12
LITAF-218ENST00000576036 SRPK2P78362 688 aaKnown RBP22.04■■□□□ 1.12
LITAF-218ENST00000576036 HSPA1LP34931 641 aa22.03■■□□□ 1.12
LITAF-218ENST00000576036 PHF8Q9UPP1 1060 aa22.02■■□□□ 1.12
LITAF-218ENST00000576036 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
LITAF-218ENST00000576036 PMFBP1Q8TBY8 1022 aa22■■□□□ 1.11
LITAF-218ENST00000576036 CCDC61Q9Y6R9 512 aa22■■□□□ 1.11
LITAF-218ENST00000576036 MON2Q7Z3U7 1717 aa22■■□□□ 1.11
LITAF-218ENST00000576036 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
LITAF-218ENST00000576036 CD163L1Q9NR16 1453 aa21.99■■□□□ 1.11
LITAF-218ENST00000576036 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
LITAF-218ENST00000576036 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
LITAF-218ENST00000576036 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
LITAF-218ENST00000576036 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
LITAF-218ENST00000576036 FOXO3O43524 673 aa21.98■■□□□ 1.11
LITAF-218ENST00000576036 PUS7Q96PZ0 661 aaKnown RBP21.98■■□□□ 1.11
LITAF-218ENST00000576036 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
LITAF-218ENST00000576036 SOS2Q07890 1332 aaPredicted RBP21.98■■□□□ 1.11
LITAF-218ENST00000576036 ALS2Q96Q42 1657 aa21.98■■□□□ 1.11
LITAF-218ENST00000576036 TMF1P82094 1093 aa21.97■■□□□ 1.11
LITAF-218ENST00000576036 SHPRHQ149N8 1683 aa21.97■■□□□ 1.11
LITAF-218ENST00000576036 XPCQ01831 940 aaPredicted RBP21.95■■□□□ 1.1
LITAF-218ENST00000576036 CABP1Q9NZU7 370 aa21.95■■□□□ 1.1
LITAF-218ENST00000576036 NPHP3Q7Z494 1330 aa21.95■■□□□ 1.1
LITAF-218ENST00000576036 ACEP12821 1306 aa21.94■■□□□ 1.1
LITAF-218ENST00000576036 SLC24A1O60721 1099 aa21.93■■□□□ 1.1
LITAF-218ENST00000576036 CPSF1Q10570 1443 aaKnown RBP21.93■■□□□ 1.1
LITAF-218ENST00000576036 COL22A1Q8NFW1 1626 aaPredicted RBP21.92■■□□□ 1.1
LITAF-218ENST00000576036 CRYBG1Q9Y4K1 1723 aa21.92■■□□□ 1.1
LITAF-218ENST00000576036 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
LITAF-218ENST00000576036 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
LITAF-218ENST00000576036 SSH2Q76I76 1423 aa21.9■■□□□ 1.1
LITAF-218ENST00000576036 MARF1Q9Y4F3 1742 aaKnown RBP21.9■■□□□ 1.1
LITAF-218ENST00000576036 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
LITAF-218ENST00000576036 USP6P35125 1406 aa21.89■■□□□ 1.1
LITAF-218ENST00000576036 NGDNQ8NEJ9 315 aaKnown RBP21.89■■□□□ 1.09
LITAF-218ENST00000576036 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
LITAF-218ENST00000576036 PIK3C2AO00443 1686 aa21.88■■□□□ 1.09
LITAF-218ENST00000576036 TNS3Q68CZ2 1445 aa21.88■■□□□ 1.09
LITAF-218ENST00000576036 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
LITAF-218ENST00000576036 NINLQ9Y2I6 1382 aa21.87■■□□□ 1.09
LITAF-218ENST00000576036 KIF7Q2M1P5 1343 aa21.87■■□□□ 1.09
LITAF-218ENST00000576036 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
LITAF-218ENST00000576036 SPATA31A3Q5VYP0 1347 aa21.86■■□□□ 1.09
LITAF-218ENST00000576036 PSME1Q06323 249 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms