RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-223ENST00000575701 NEUROD1Q13562 356 aa36.53■■■■□ 3.44
SRRM2-223ENST00000575701 L3MBTL2Q969R5 705 aa36.52■■■■□ 3.44
SRRM2-223ENST00000575701 COL16A1Q07092 1604 aaPredicted RBP36.51■■■■□ 3.43
SRRM2-223ENST00000575701 PRAM1Q96QH2 718 aa36.48■■■■□ 3.43
SRRM2-223ENST00000575701 NHSL1Q5SYE7 1610 aa36.48■■■■□ 3.43
SRRM2-223ENST00000575701 POGKQ9P215 609 aa36.46■■■■□ 3.43
SRRM2-223ENST00000575701 TRAK1Q9UPV9 953 aa36.46■■■■□ 3.43
SRRM2-223ENST00000575701 MED1Q15648 1581 aaPredicted RBP36.45■■■■□ 3.43
SRRM2-223ENST00000575701 FMN2Q9NZ56 1722 aa36.45■■■■□ 3.43
SRRM2-223ENST00000575701 ARHGEF28Q8N1W1 1705 aaKnown RBP36.42■■■■□ 3.42
SRRM2-223ENST00000575701 ADGRB2O60241 1585 aa36.42■■■■□ 3.42
SRRM2-223ENST00000575701 DISP3Q9P2K9 1392 aa36.41■■■■□ 3.42
SRRM2-223ENST00000575701 JCADQ9P266 1359 aa36.4■■■■□ 3.42
SRRM2-223ENST00000575701 PCGF6Q9BYE7 350 aa36.4■■■■□ 3.42
SRRM2-223ENST00000575701 SAFB2Q14151 953 aaKnown RBP eCLIP36.37■■■■□ 3.41
SRRM2-223ENST00000575701 TONSLQ96HA7 1378 aa36.37■■■■□ 3.41
SRRM2-223ENST00000575701 TRPM1Q7Z4N2 1603 aa36.35■■■■□ 3.41
SRRM2-223ENST00000575701 ORAI2Q96SN7 254 aa36.35■■■■□ 3.41
SRRM2-223ENST00000575701 SHPRHQ149N8 1683 aa36.33■■■■□ 3.41
SRRM2-223ENST00000575701 NBPF1Q3BBV0 1214 aa36.33■■■■□ 3.41
SRRM2-223ENST00000575701 ESCO1Q5FWF5 840 aa36.31■■■■□ 3.4
SRRM2-223ENST00000575701 KIF1AQ12756 1690 aa36.3■■■■□ 3.4
SRRM2-223ENST00000575701 EIF3AQ14152 1382 aaKnown RBP36.29■■■■□ 3.4
SRRM2-223ENST00000575701 ANKARQ7Z5J8 1434 aa36.28■■■■□ 3.4
SRRM2-223ENST00000575701 LRRC59Q96AG4 307 aaKnown RBP36.27■■■■□ 3.4
SRRM2-223ENST00000575701 NUTM2FA1L443 756 aa36.26■■■■□ 3.4
SRRM2-223ENST00000575701 SPATA31A6Q5VVP1 1343 aa36.26■■■■□ 3.39
SRRM2-223ENST00000575701 NPHP3Q7Z494 1330 aa36.26■■■■□ 3.39
SRRM2-223ENST00000575701 MINK1Q8N4C8 1332 aaPredicted RBP36.26■■■■□ 3.39
SRRM2-223ENST00000575701 DDX17Q92841 729 aaKnown RBP36.24■■■■□ 3.39
SRRM2-223ENST00000575701 SOS2Q07890 1332 aaPredicted RBP36.24■■■■□ 3.39
SRRM2-223ENST00000575701 CLSPNQ9HAW4 1339 aa36.24■■■■□ 3.39
SRRM2-223ENST00000575701 HIRIP3Q9BW71 556 aaPredicted RBP36.22■■■■□ 3.39
SRRM2-223ENST00000575701 ROCK2O75116 1388 aaKnown RBP36.22■■■■□ 3.39
SRRM2-223ENST00000575701 TULP4Q9NRJ4 1543 aa36.22■■■■□ 3.39
SRRM2-223ENST00000575701 RGPD8O14715 1765 aaPredicted RBP36.21■■■■□ 3.39
SRRM2-223ENST00000575701 USP32Q8NFA0 1604 aa36.2■■■■□ 3.39
SRRM2-223ENST00000575701 WASLO00401 505 aaPredicted RBP36.2■■■■□ 3.39
SRRM2-223ENST00000575701 PHF23Q9BUL5 403 aaPredicted RBP36.2■■■■□ 3.39
SRRM2-223ENST00000575701 PXDNQ92626 1479 aa36.18■■■■□ 3.38
SRRM2-223ENST00000575701 GPRASP1Q5JY77 1395 aa36.16■■■■□ 3.38
SRRM2-223ENST00000575701 CENPJQ9HC77 1338 aaPredicted RBP36.16■■■■□ 3.38
SRRM2-223ENST00000575701 NBPF8Q3BBV2 869 aa36.16■■■■□ 3.38
SRRM2-223ENST00000575701 FOXO3O43524 673 aa36.15■■■■□ 3.38
SRRM2-223ENST00000575701 PHF8Q9UPP1 1060 aa36.15■■■■□ 3.38
SRRM2-223ENST00000575701 PNPLA6Q8IY17 1366 aa36.15■■■■□ 3.38
SRRM2-223ENST00000575701 RALGAPBQ86X10 1494 aa36.13■■■■□ 3.37
SRRM2-223ENST00000575701 QRICH2Q9H0J4 1663 aa36.13■■■■□ 3.37
SRRM2-223ENST00000575701 ITSN1Q15811 1721 aa36.11■■■■□ 3.37
SRRM2-223ENST00000575701 LRP6O75581 1613 aa36.1■■■■□ 3.37
SRRM2-223ENST00000575701 PRR36Q9H6K5 1346 aa36.08■■■■□ 3.37
SRRM2-223ENST00000575701 ATP7BP35670 1465 aa36.07■■■■□ 3.37
SRRM2-223ENST00000575701 COL22A1Q8NFW1 1626 aaPredicted RBP36.07■■■■□ 3.36
SRRM2-223ENST00000575701 TIMELESSQ9UNS1 1208 aa36.05■■■■□ 3.36
SRRM2-223ENST00000575701 CDK19Q9BWU1 502 aa36.04■■■■□ 3.36
SRRM2-223ENST00000575701 XPCQ01831 940 aaPredicted RBP36.03■■■■□ 3.36
SRRM2-223ENST00000575701 PSME1Q06323 249 aa36.02■■■■□ 3.36
SRRM2-223ENST00000575701 MEX3CQ5U5Q3 659 aaKnown RBP36.02■■■■□ 3.36
SRRM2-223ENST00000575701 KRT28Q7Z3Y7 464 aa36.02■■■■□ 3.36
SRRM2-223ENST00000575701 CARD11Q9BXL7 1154 aa36.02■■■■□ 3.36
SRRM2-223ENST00000575701 NUDT16Q96DE0 195 aaKnown RBP36.01■■■■□ 3.36
SRRM2-223ENST00000575701 TOPAZ1Q8N9V7 1692 aa36■■■■□ 3.35
SRRM2-223ENST00000575701 NUTM2BA6NNL0 878 aaPredicted RBP35.99■■■■□ 3.35
SRRM2-223ENST00000575701 NUTM2EB1AL46 878 aaPredicted RBP35.99■■■■□ 3.35
SRRM2-223ENST00000575701 NUTM2AQ8IVF1 878 aaPredicted RBP35.99■■■■□ 3.35
SRRM2-223ENST00000575701 PMFBP1Q8TBY8 1022 aa35.99■■■■□ 3.35
SRRM2-223ENST00000575701 SBNO1A3KN83 1393 aa35.98■■■■□ 3.35
SRRM2-223ENST00000575701 CCER1Q8TC90 406 aaPredicted RBP35.97■■■■□ 3.35
SRRM2-223ENST00000575701 SPATA31A3Q5VYP0 1347 aa35.97■■■■□ 3.35
SRRM2-223ENST00000575701 TNS3Q68CZ2 1445 aa35.96■■■■□ 3.35
SRRM2-223ENST00000575701 ILDR2Q71H61 639 aa35.95■■■■□ 3.35
SRRM2-223ENST00000575701 RGS17Q9UGC6 210 aaPredicted RBP35.94■■■■□ 3.34
SRRM2-223ENST00000575701 CCDC61Q9Y6R9 512 aa35.94■■■■□ 3.34
SRRM2-223ENST00000575701 SBNO2Q9Y2G9 1366 aa35.93■■■■□ 3.34
SRRM2-223ENST00000575701 EVC2Q86UK5 1308 aa35.93■■■■□ 3.34
SRRM2-223ENST00000575701 SRPK2P78362 688 aaKnown RBP35.93■■■■□ 3.34
SRRM2-223ENST00000575701 NGDNQ8NEJ9 315 aaKnown RBP35.92■■■■□ 3.34
SRRM2-223ENST00000575701 TRPM3Q9HCF6 1732 aaPredicted RBP35.91■■■■□ 3.34
SRRM2-223ENST00000575701 ARHGEF10O15013 1369 aa35.89■■■■□ 3.34
SRRM2-223ENST00000575701 POLR3AO14802 1390 aaPredicted RBP35.88■■■■□ 3.33
SRRM2-223ENST00000575701 PLEKHG3A1L390 1219 aa35.86■■■■□ 3.33
SRRM2-223ENST00000575701 ZNF772Q68DY9 489 aaPredicted RBP35.85■■■■□ 3.33
SRRM2-223ENST00000575701 CABP2Q9NPB3 220 aa35.85■■■■□ 3.33
SRRM2-223ENST00000575701 PPIP5K1Q6PFW1 1433 aa35.84■■■■□ 3.33
SRRM2-223ENST00000575701 ALS2Q96Q42 1657 aa35.83■■■■□ 3.33
SRRM2-223ENST00000575701 MARF1Q9Y4F3 1742 aaKnown RBP35.81■■■■□ 3.32
SRRM2-223ENST00000575701 ADAMTS2O95450 1211 aa35.81■■■■□ 3.32
SRRM2-223ENST00000575701 ACEP12821 1306 aa35.81■■■■□ 3.32
SRRM2-223ENST00000575701 C8orf37Q96NL8 207 aa35.8■■■■□ 3.32
SRRM2-223ENST00000575701 LMOD2Q6P5Q4 547 aa35.78■■■■□ 3.32
SRRM2-223ENST00000575701 POTEAQ6S8J7 498 aa35.78■■■■□ 3.32
SRRM2-223ENST00000575701 AFF2P51816 1311 aa35.78■■■■□ 3.32
SRRM2-223ENST00000575701 ATAD2Q6PL18 1390 aa35.77■■■■□ 3.32
SRRM2-223ENST00000575701 ABCA3Q99758 1704 aa35.76■■■■□ 3.31
SRRM2-223ENST00000575701 NGLY1Q96IV0 654 aa35.75■■■■□ 3.31
SRRM2-223ENST00000575701 SLC24A1O60721 1099 aa35.74■■■■□ 3.31
SRRM2-223ENST00000575701 BRD4O60885 1362 aaPredicted RBP35.73■■■■□ 3.31
SRRM2-223ENST00000575701 PAK3O75914 559 aaPredicted RBP35.72■■■■□ 3.31
SRRM2-223ENST00000575701 HAP1P54257 671 aaPredicted RBP35.71■■■■□ 3.31
SRRM2-223ENST00000575701 CABP1Q9NZU7 370 aa35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms