RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 TRPM1Q7Z4N2 1603 aa25.5■■□□□ 1.67
CLDN7-208ENST00000575313 PLEKHH1Q9ULM0 1364 aa25.49■■□□□ 1.67
CLDN7-208ENST00000575313 PRAM1Q96QH2 718 aa25.49■■□□□ 1.67
CLDN7-208ENST00000575313 POGKQ9P215 609 aa25.49■■□□□ 1.67
CLDN7-208ENST00000575313 SLAIN2Q9P270 581 aa25.49■■□□□ 1.67
CLDN7-208ENST00000575313 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
CLDN7-208ENST00000575313 ROCK2O75116 1388 aaKnown RBP25.46■■□□□ 1.67
CLDN7-208ENST00000575313 CDC42BPGQ6DT37 1551 aa25.45■■□□□ 1.66
CLDN7-208ENST00000575313 ARHGEF28Q8N1W1 1705 aaKnown RBP25.43■■□□□ 1.66
CLDN7-208ENST00000575313 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
CLDN7-208ENST00000575313 MST1RQ04912 1400 aa25.42■■□□□ 1.66
CLDN7-208ENST00000575313 GPRASP1Q5JY77 1395 aa25.42■■□□□ 1.66
CLDN7-208ENST00000575313 SAFB2Q14151 953 aaKnown RBP eCLIP25.41■■□□□ 1.66
CLDN7-208ENST00000575313 ROBO1Q9Y6N7 1651 aa25.39■■□□□ 1.66
CLDN7-208ENST00000575313 ADGRB2O60241 1585 aa25.37■■□□□ 1.65
CLDN7-208ENST00000575313 C1orf167Q5SNV9 1468 aa25.36■■□□□ 1.65
CLDN7-208ENST00000575313 EIF3AQ14152 1382 aaKnown RBP25.35■■□□□ 1.65
CLDN7-208ENST00000575313 CARD11Q9BXL7 1154 aa25.35■■□□□ 1.65
CLDN7-208ENST00000575313 MINK1Q8N4C8 1332 aaPredicted RBP25.35■■□□□ 1.65
CLDN7-208ENST00000575313 CENPJQ9HC77 1338 aaPredicted RBP25.35■■□□□ 1.65
CLDN7-208ENST00000575313 HSPA1LP34931 641 aa25.34■■□□□ 1.65
CLDN7-208ENST00000575313 BRINP3Q76B58 766 aa25.33■■□□□ 1.65
CLDN7-208ENST00000575313 FMN2Q9NZ56 1722 aa25.33■■□□□ 1.65
CLDN7-208ENST00000575313 HIRIP3Q9BW71 556 aaPredicted RBP25.31■■□□□ 1.64
CLDN7-208ENST00000575313 WASLO00401 505 aaPredicted RBP25.28■■□□□ 1.64
CLDN7-208ENST00000575313 ANKARQ7Z5J8 1434 aa25.27■■□□□ 1.64
CLDN7-208ENST00000575313 AHDC1Q5TGY3 1603 aaPredicted RBP25.26■■□□□ 1.63
CLDN7-208ENST00000575313 QRICH2Q9H0J4 1663 aa25.26■■□□□ 1.63
CLDN7-208ENST00000575313 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
CLDN7-208ENST00000575313 ESCO1Q5FWF5 840 aa25.26■■□□□ 1.63
CLDN7-208ENST00000575313 ORAI2Q96SN7 254 aa25.26■■□□□ 1.63
CLDN7-208ENST00000575313 TULP4Q9NRJ4 1543 aa25.23■■□□□ 1.63
CLDN7-208ENST00000575313 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
CLDN7-208ENST00000575313 NHSL1Q5SYE7 1610 aa25.22■■□□□ 1.63
CLDN7-208ENST00000575313 CDK19Q9BWU1 502 aa25.21■■□□□ 1.63
CLDN7-208ENST00000575313 SBNO2Q9Y2G9 1366 aa25.2■■□□□ 1.63
CLDN7-208ENST00000575313 KIF1AQ12756 1690 aa25.2■■□□□ 1.62
CLDN7-208ENST00000575313 COL16A1Q07092 1604 aaPredicted RBP25.19■■□□□ 1.62
CLDN7-208ENST00000575313 USP32Q8NFA0 1604 aa25.19■■□□□ 1.62
CLDN7-208ENST00000575313 NPHP3Q7Z494 1330 aa25.17■■□□□ 1.62
CLDN7-208ENST00000575313 EVC2Q86UK5 1308 aa25.17■■□□□ 1.62
CLDN7-208ENST00000575313 PHF8Q9UPP1 1060 aa25.17■■□□□ 1.62
CLDN7-208ENST00000575313 PRR36Q9H6K5 1346 aa25.16■■□□□ 1.62
CLDN7-208ENST00000575313 SRPK2P78362 688 aaKnown RBP25.16■■□□□ 1.62
CLDN7-208ENST00000575313 NUDT16Q96DE0 195 aaKnown RBP25.16■■□□□ 1.62
CLDN7-208ENST00000575313 USP47Q96K76 1375 aa25.16■■□□□ 1.62
CLDN7-208ENST00000575313 RGPD8O14715 1765 aaPredicted RBP25.16■■□□□ 1.62
CLDN7-208ENST00000575313 ATP7BP35670 1465 aa25.15■■□□□ 1.62
CLDN7-208ENST00000575313 FOXO3O43524 673 aa25.14■■□□□ 1.62
CLDN7-208ENST00000575313 SLC24A1O60721 1099 aa25.14■■□□□ 1.62
CLDN7-208ENST00000575313 DDX17Q92841 729 aaKnown RBP25.14■■□□□ 1.62
CLDN7-208ENST00000575313 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
CLDN7-208ENST00000575313 ITSN1Q15811 1721 aa25.13■■□□□ 1.61
CLDN7-208ENST00000575313 JCADQ9P266 1359 aa25.13■■□□□ 1.61
CLDN7-208ENST00000575313 ST20-MTHFSA0A0A6YYL1 179 aa25.12■■□□□ 1.61
CLDN7-208ENST00000575313 LRRC59Q96AG4 307 aaKnown RBP25.12■■□□□ 1.61
CLDN7-208ENST00000575313 CCDC61Q9Y6R9 512 aa25.12■■□□□ 1.61
CLDN7-208ENST00000575313 CABP2Q9NPB3 220 aa25.1■■□□□ 1.61
CLDN7-208ENST00000575313 PXDNQ92626 1479 aa25.09■■□□□ 1.61
CLDN7-208ENST00000575313 PMFBP1Q8TBY8 1022 aa25.09■■□□□ 1.61
CLDN7-208ENST00000575313 TOPAZ1Q8N9V7 1692 aa25.07■■□□□ 1.6
CLDN7-208ENST00000575313 TESK2Q96S53 571 aa25.07■■□□□ 1.6
CLDN7-208ENST00000575313 PSME1Q06323 249 aa25.06■■□□□ 1.6
CLDN7-208ENST00000575313 KRT28Q7Z3Y7 464 aa25.06■■□□□ 1.6
CLDN7-208ENST00000575313 NGDNQ8NEJ9 315 aaKnown RBP25.06■■□□□ 1.6
CLDN7-208ENST00000575313 PLEKHG3A1L390 1219 aa25.05■■□□□ 1.6
CLDN7-208ENST00000575313 ATAD2Q6PL18 1390 aa25.05■■□□□ 1.6
CLDN7-208ENST00000575313 PPIP5K1Q6PFW1 1433 aa25.04■■□□□ 1.6
CLDN7-208ENST00000575313 SHPRHQ149N8 1683 aa25.04■■□□□ 1.6
CLDN7-208ENST00000575313 XPCQ01831 940 aaPredicted RBP25.04■■□□□ 1.6
CLDN7-208ENST00000575313 PUS7Q96PZ0 661 aaKnown RBP25.03■■□□□ 1.6
CLDN7-208ENST00000575313 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
CLDN7-208ENST00000575313 SPATA31A6Q5VVP1 1343 aa25.02■■□□□ 1.6
CLDN7-208ENST00000575313 POLR3AO14802 1390 aaPredicted RBP25.02■■□□□ 1.6
CLDN7-208ENST00000575313 SBNO1A3KN83 1393 aa25.01■■□□□ 1.59
CLDN7-208ENST00000575313 PNPLA6Q8IY17 1366 aa25.01■■□□□ 1.59
CLDN7-208ENST00000575313 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
CLDN7-208ENST00000575313 TMF1P82094 1093 aa25■■□□□ 1.59
CLDN7-208ENST00000575313 ACEP12821 1306 aa25■■□□□ 1.59
CLDN7-208ENST00000575313 SPATA31A3Q5VYP0 1347 aa24.99■■□□□ 1.59
CLDN7-208ENST00000575313 CABP1Q9NZU7 370 aa24.99■■□□□ 1.59
CLDN7-208ENST00000575313 TNS3Q68CZ2 1445 aa24.97■■□□□ 1.59
CLDN7-208ENST00000575313 CDCA8Q53HL2 280 aa24.96■■□□□ 1.59
CLDN7-208ENST00000575313 MED1Q15648 1581 aaPredicted RBP24.96■■□□□ 1.59
CLDN7-208ENST00000575313 ARHGEF10O15013 1369 aa24.94■■□□□ 1.58
CLDN7-208ENST00000575313 COL22A1Q8NFW1 1626 aaPredicted RBP24.94■■□□□ 1.58
CLDN7-208ENST00000575313 TRPM3Q9HCF6 1732 aaPredicted RBP24.94■■□□□ 1.58
CLDN7-208ENST00000575313 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
CLDN7-208ENST00000575313 BRD4O60885 1362 aaPredicted RBP24.93■■□□□ 1.58
CLDN7-208ENST00000575313 NINLQ9Y2I6 1382 aa24.92■■□□□ 1.58
CLDN7-208ENST00000575313 ZNF692Q9BU19 519 aaPredicted RBP24.91■■□□□ 1.58
CLDN7-208ENST00000575313 PAK3O75914 559 aaPredicted RBP24.9■■□□□ 1.58
CLDN7-208ENST00000575313 LMOD2Q6P5Q4 547 aa24.9■■□□□ 1.58
CLDN7-208ENST00000575313 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
CLDN7-208ENST00000575313 USP6P35125 1406 aa24.89■■□□□ 1.58
CLDN7-208ENST00000575313 NUTM2BA6NNL0 878 aaPredicted RBP24.89■■□□□ 1.58
CLDN7-208ENST00000575313 NUTM2EB1AL46 878 aaPredicted RBP24.89■■□□□ 1.58
CLDN7-208ENST00000575313 NUTM2AQ8IVF1 878 aaPredicted RBP24.89■■□□□ 1.58
CLDN7-208ENST00000575313 LRP6O75581 1613 aa24.89■■□□□ 1.57
CLDN7-208ENST00000575313 ALS2Q96Q42 1657 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms