RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
NDE1-210ENST00000574163 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
NDE1-210ENST00000574163 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
NDE1-210ENST00000574163 FMN2Q9NZ56 1722 aa14.15□□□□□ -0.14
NDE1-210ENST00000574163 NHSL1Q5SYE7 1610 aa14.15□□□□□ -0.14
NDE1-210ENST00000574163 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
NDE1-210ENST00000574163 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
NDE1-210ENST00000574163 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
NDE1-210ENST00000574163 COL16A1Q07092 1604 aaPredicted RBP14.13□□□□□ -0.15
NDE1-210ENST00000574163 HSPA1LP34931 641 aa14.13□□□□□ -0.15
NDE1-210ENST00000574163 STK26Q9P289 416 aa14.12□□□□□ -0.15
NDE1-210ENST00000574163 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
NDE1-210ENST00000574163 PLEKHH1Q9ULM0 1364 aa14.11□□□□□ -0.15
NDE1-210ENST00000574163 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
NDE1-210ENST00000574163 SIN3AQ96ST3 1273 aa14.11□□□□□ -0.15
NDE1-210ENST00000574163 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
NDE1-210ENST00000574163 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
NDE1-210ENST00000574163 KIF1AQ12756 1690 aa14.1□□□□□ -0.15
NDE1-210ENST00000574163 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
NDE1-210ENST00000574163 SHPRHQ149N8 1683 aa14.08□□□□□ -0.16
NDE1-210ENST00000574163 BRINP3Q76B58 766 aa14.08□□□□□ -0.16
NDE1-210ENST00000574163 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
NDE1-210ENST00000574163 MED1Q15648 1581 aaPredicted RBP14.08□□□□□ -0.16
NDE1-210ENST00000574163 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
NDE1-210ENST00000574163 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
NDE1-210ENST00000574163 EIF3AQ14152 1382 aaKnown RBP14.07□□□□□ -0.16
NDE1-210ENST00000574163 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
NDE1-210ENST00000574163 RALGAPBQ86X10 1494 aa14.06□□□□□ -0.16
NDE1-210ENST00000574163 PRAM1Q96QH2 718 aa14.06□□□□□ -0.16
NDE1-210ENST00000574163 GPRASP1Q5JY77 1395 aa14.06□□□□□ -0.16
NDE1-210ENST00000574163 POGKQ9P215 609 aa14.05□□□□□ -0.16
NDE1-210ENST00000574163 TULP4Q9NRJ4 1543 aa14.05□□□□□ -0.16
NDE1-210ENST00000574163 USP32Q8NFA0 1604 aa14.04□□□□□ -0.16
NDE1-210ENST00000574163 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
NDE1-210ENST00000574163 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
NDE1-210ENST00000574163 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
NDE1-210ENST00000574163 JCADQ9P266 1359 aa14.04□□□□□ -0.16
NDE1-210ENST00000574163 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
NDE1-210ENST00000574163 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.17
NDE1-210ENST00000574163 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
NDE1-210ENST00000574163 NBPF1Q3BBV0 1214 aa14.01□□□□□ -0.17
NDE1-210ENST00000574163 ATP7BP35670 1465 aa13.99□□□□□ -0.17
NDE1-210ENST00000574163 PXDNQ92626 1479 aa13.99□□□□□ -0.17
NDE1-210ENST00000574163 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
NDE1-210ENST00000574163 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
NDE1-210ENST00000574163 SAFB2Q14151 953 aaKnown RBP eCLIP13.99□□□□□ -0.17
NDE1-210ENST00000574163 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
NDE1-210ENST00000574163 COL22A1Q8NFW1 1626 aaPredicted RBP13.99□□□□□ -0.17
NDE1-210ENST00000574163 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
NDE1-210ENST00000574163 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
NDE1-210ENST00000574163 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
NDE1-210ENST00000574163 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
NDE1-210ENST00000574163 SPATA31A6Q5VVP1 1343 aa13.97□□□□□ -0.17
NDE1-210ENST00000574163 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
NDE1-210ENST00000574163 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.17
NDE1-210ENST00000574163 WASLO00401 505 aaPredicted RBP13.96□□□□□ -0.17
NDE1-210ENST00000574163 ESCO1Q5FWF5 840 aa13.96□□□□□ -0.17
NDE1-210ENST00000574163 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.18
NDE1-210ENST00000574163 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
NDE1-210ENST00000574163 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
NDE1-210ENST00000574163 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
NDE1-210ENST00000574163 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
NDE1-210ENST00000574163 LRP6O75581 1613 aa13.93□□□□□ -0.18
NDE1-210ENST00000574163 PRR36Q9H6K5 1346 aa13.93□□□□□ -0.18
NDE1-210ENST00000574163 ZBTB22O15209 634 aa13.93□□□□□ -0.18
NDE1-210ENST00000574163 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
NDE1-210ENST00000574163 NUTM2FA1L443 756 aa13.92□□□□□ -0.18
NDE1-210ENST00000574163 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
NDE1-210ENST00000574163 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
NDE1-210ENST00000574163 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
NDE1-210ENST00000574163 CCER1Q8TC90 406 aaPredicted RBP13.91□□□□□ -0.18
NDE1-210ENST00000574163 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
NDE1-210ENST00000574163 ALS2Q96Q42 1657 aa13.91□□□□□ -0.18
NDE1-210ENST00000574163 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
NDE1-210ENST00000574163 FOXO3O43524 673 aa13.9□□□□□ -0.18
NDE1-210ENST00000574163 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
NDE1-210ENST00000574163 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
NDE1-210ENST00000574163 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
NDE1-210ENST00000574163 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
NDE1-210ENST00000574163 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
NDE1-210ENST00000574163 CDK19Q9BWU1 502 aa13.88□□□□□ -0.19
NDE1-210ENST00000574163 SPATA31A3Q5VYP0 1347 aa13.88□□□□□ -0.19
NDE1-210ENST00000574163 PSME1Q06323 249 aa13.87□□□□□ -0.19
NDE1-210ENST00000574163 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
NDE1-210ENST00000574163 ATAD2Q6PL18 1390 aa13.86□□□□□ -0.19
NDE1-210ENST00000574163 PPIP5K1Q6PFW1 1433 aa13.86□□□□□ -0.19
NDE1-210ENST00000574163 CRYBG1Q9Y4K1 1723 aa13.86□□□□□ -0.19
NDE1-210ENST00000574163 BRD4O60885 1362 aaPredicted RBP13.85□□□□□ -0.19
NDE1-210ENST00000574163 PLEKHG3A1L390 1219 aa13.85□□□□□ -0.19
NDE1-210ENST00000574163 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
NDE1-210ENST00000574163 XPCQ01831 940 aaPredicted RBP13.85□□□□□ -0.19
NDE1-210ENST00000574163 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
NDE1-210ENST00000574163 AKAP12Q02952 1782 aa13.85□□□□□ -0.19
NDE1-210ENST00000574163 USP47Q96K76 1375 aa13.84□□□□□ -0.19
NDE1-210ENST00000574163 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
NDE1-210ENST00000574163 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
NDE1-210ENST00000574163 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
NDE1-210ENST00000574163 NRKQ7Z2Y5 1582 aa13.83□□□□□ -0.2
NDE1-210ENST00000574163 MON2Q7Z3U7 1717 aa13.82□□□□□ -0.2
NDE1-210ENST00000574163 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms