RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 CDC42BPGQ6DT37 1551 aa30.4■■■□□ 2.46
ABR-221ENST00000573559 SAFB2Q14151 953 aaKnown RBP eCLIP30.39■■■□□ 2.46
ABR-221ENST00000573559 SIRT1Q96EB6 747 aa30.39■■■□□ 2.46
ABR-221ENST00000573559 POGKQ9P215 609 aa30.38■■■□□ 2.45
ABR-221ENST00000573559 ARHGEF28Q8N1W1 1705 aaKnown RBP30.38■■■□□ 2.45
ABR-221ENST00000573559 TRPM1Q7Z4N2 1603 aa30.37■■■□□ 2.45
ABR-221ENST00000573559 NBPF1Q3BBV0 1214 aa30.36■■■□□ 2.45
ABR-221ENST00000573559 PHLPP1O60346 1717 aa30.33■■■□□ 2.45
ABR-221ENST00000573559 C1orf167Q5SNV9 1468 aa30.31■■■□□ 2.44
ABR-221ENST00000573559 BRINP3Q76B58 766 aa30.31■■■□□ 2.44
ABR-221ENST00000573559 CCER1Q8TC90 406 aaPredicted RBP30.31■■■□□ 2.44
ABR-221ENST00000573559 FMN2Q9NZ56 1722 aa30.3■■■□□ 2.44
ABR-221ENST00000573559 CLSPNQ9HAW4 1339 aa30.29■■■□□ 2.44
ABR-221ENST00000573559 ROCK2O75116 1388 aaKnown RBP30.28■■■□□ 2.44
ABR-221ENST00000573559 NUTM2FA1L443 756 aa30.27■■■□□ 2.44
ABR-221ENST00000573559 NBPF8Q3BBV2 869 aa30.27■■■□□ 2.44
ABR-221ENST00000573559 MINK1Q8N4C8 1332 aaPredicted RBP30.26■■■□□ 2.44
ABR-221ENST00000573559 AHDC1Q5TGY3 1603 aaPredicted RBP30.26■■■□□ 2.44
ABR-221ENST00000573559 ADGRB2O60241 1585 aa30.26■■■□□ 2.43
ABR-221ENST00000573559 HIRIP3Q9BW71 556 aaPredicted RBP30.24■■■□□ 2.43
ABR-221ENST00000573559 NHSL1Q5SYE7 1610 aa30.23■■■□□ 2.43
ABR-221ENST00000573559 ORAI2Q96SN7 254 aa30.22■■■□□ 2.43
ABR-221ENST00000573559 COL16A1Q07092 1604 aaPredicted RBP30.22■■■□□ 2.43
ABR-221ENST00000573559 RALGAPBQ86X10 1494 aa30.19■■■□□ 2.42
ABR-221ENST00000573559 ESCO1Q5FWF5 840 aa30.19■■■□□ 2.42
ABR-221ENST00000573559 RGPD8O14715 1765 aaPredicted RBP30.18■■■□□ 2.42
ABR-221ENST00000573559 DDX17Q92841 729 aaKnown RBP30.17■■■□□ 2.42
ABR-221ENST00000573559 QRICH2Q9H0J4 1663 aa30.17■■■□□ 2.42
ABR-221ENST00000573559 CENPJQ9HC77 1338 aaPredicted RBP30.15■■■□□ 2.42
ABR-221ENST00000573559 GPRASP1Q5JY77 1395 aa30.14■■■□□ 2.41
ABR-221ENST00000573559 KIF1AQ12756 1690 aa30.13■■■□□ 2.41
ABR-221ENST00000573559 USP32Q8NFA0 1604 aa30.12■■■□□ 2.41
ABR-221ENST00000573559 WASLO00401 505 aaPredicted RBP30.12■■■□□ 2.41
ABR-221ENST00000573559 CARD11Q9BXL7 1154 aa30.12■■■□□ 2.41
ABR-221ENST00000573559 EIF3AQ14152 1382 aaKnown RBP30.12■■■□□ 2.41
ABR-221ENST00000573559 TULP4Q9NRJ4 1543 aa30.12■■■□□ 2.41
ABR-221ENST00000573559 ANKARQ7Z5J8 1434 aa30.11■■■□□ 2.41
ABR-221ENST00000573559 MED1Q15648 1581 aaPredicted RBP30.09■■■□□ 2.41
ABR-221ENST00000573559 JCADQ9P266 1359 aa30.09■■■□□ 2.41
ABR-221ENST00000573559 TIMELESSQ9UNS1 1208 aa30.09■■■□□ 2.41
ABR-221ENST00000573559 NPHP3Q7Z494 1330 aa30.06■■■□□ 2.4
ABR-221ENST00000573559 SHPRHQ149N8 1683 aa30.06■■■□□ 2.4
ABR-221ENST00000573559 FOXO3O43524 673 aa30.05■■■□□ 2.4
ABR-221ENST00000573559 PHF8Q9UPP1 1060 aa30.04■■■□□ 2.4
ABR-221ENST00000573559 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
ABR-221ENST00000573559 PRR36Q9H6K5 1346 aa30.03■■■□□ 2.4
ABR-221ENST00000573559 CDK19Q9BWU1 502 aa30.03■■■□□ 2.4
ABR-221ENST00000573559 XPCQ01831 940 aaPredicted RBP30.02■■■□□ 2.4
ABR-221ENST00000573559 LRRC59Q96AG4 307 aaKnown RBP30.02■■■□□ 2.4
ABR-221ENST00000573559 SOS2Q07890 1332 aaPredicted RBP30.01■■■□□ 2.4
ABR-221ENST00000573559 ATP7BP35670 1465 aa30.01■■■□□ 2.4
ABR-221ENST00000573559 DISP3Q9P2K9 1392 aa30.01■■■□□ 2.39
ABR-221ENST00000573559 PXDNQ92626 1479 aa30■■■□□ 2.39
ABR-221ENST00000573559 PMFBP1Q8TBY8 1022 aa30■■■□□ 2.39
ABR-221ENST00000573559 SRPK2P78362 688 aaKnown RBP29.98■■■□□ 2.39
ABR-221ENST00000573559 NUDT16Q96DE0 195 aaKnown RBP29.98■■■□□ 2.39
ABR-221ENST00000573559 TOPAZ1Q8N9V7 1692 aa29.97■■■□□ 2.39
ABR-221ENST00000573559 PNPLA6Q8IY17 1366 aa29.95■■■□□ 2.39
ABR-221ENST00000573559 SPATA31A6Q5VVP1 1343 aa29.95■■■□□ 2.38
ABR-221ENST00000573559 EVC2Q86UK5 1308 aa29.94■■■□□ 2.38
ABR-221ENST00000573559 KRT28Q7Z3Y7 464 aa29.93■■■□□ 2.38
ABR-221ENST00000573559 CABP2Q9NPB3 220 aa29.93■■■□□ 2.38
ABR-221ENST00000573559 PSME1Q06323 249 aa29.91■■■□□ 2.38
ABR-221ENST00000573559 PHF23Q9BUL5 403 aaPredicted RBP29.91■■■□□ 2.38
ABR-221ENST00000573559 NUTM2BA6NNL0 878 aaPredicted RBP29.9■■■□□ 2.38
ABR-221ENST00000573559 NUTM2EB1AL46 878 aaPredicted RBP29.9■■■□□ 2.38
ABR-221ENST00000573559 NUTM2AQ8IVF1 878 aaPredicted RBP29.9■■■□□ 2.38
ABR-221ENST00000573559 NGDNQ8NEJ9 315 aaKnown RBP29.9■■■□□ 2.38
ABR-221ENST00000573559 LRP6O75581 1613 aa29.89■■■□□ 2.38
ABR-221ENST00000573559 SBNO2Q9Y2G9 1366 aa29.89■■■□□ 2.37
ABR-221ENST00000573559 CCDC61Q9Y6R9 512 aa29.88■■■□□ 2.37
ABR-221ENST00000573559 USP47Q96K76 1375 aa29.87■■■□□ 2.37
ABR-221ENST00000573559 MEX3CQ5U5Q3 659 aaKnown RBP29.86■■■□□ 2.37
ABR-221ENST00000573559 PPIP5K1Q6PFW1 1433 aa29.86■■■□□ 2.37
ABR-221ENST00000573559 COL22A1Q8NFW1 1626 aaPredicted RBP29.85■■■□□ 2.37
ABR-221ENST00000573559 TNS3Q68CZ2 1445 aa29.85■■■□□ 2.37
ABR-221ENST00000573559 ST20-MTHFSA0A0A6YYL1 179 aa29.84■■■□□ 2.37
ABR-221ENST00000573559 SPATA31A3Q5VYP0 1347 aa29.84■■■□□ 2.37
ABR-221ENST00000573559 TRPM3Q9HCF6 1732 aaPredicted RBP29.83■■■□□ 2.37
ABR-221ENST00000573559 SBNO1A3KN83 1393 aa29.82■■■□□ 2.36
ABR-221ENST00000573559 LMOD2Q6P5Q4 547 aa29.81■■■□□ 2.36
ABR-221ENST00000573559 ACEP12821 1306 aa29.8■■■□□ 2.36
ABR-221ENST00000573559 PLEKHG3A1L390 1219 aa29.79■■■□□ 2.36
ABR-221ENST00000573559 POLR3AO14802 1390 aaPredicted RBP29.78■■■□□ 2.36
ABR-221ENST00000573559 ATAD2Q6PL18 1390 aa29.77■■■□□ 2.36
ABR-221ENST00000573559 PAK3O75914 559 aaPredicted RBP29.77■■■□□ 2.36
ABR-221ENST00000573559 CABP1Q9NZU7 370 aa29.77■■■□□ 2.36
ABR-221ENST00000573559 ARHGEF10O15013 1369 aa29.77■■■□□ 2.36
ABR-221ENST00000573559 ALS2Q96Q42 1657 aa29.76■■■□□ 2.36
ABR-221ENST00000573559 PLEKHG5O94827 1062 aa29.76■■■□□ 2.35
ABR-221ENST00000573559 TESK2Q96S53 571 aa29.76■■■□□ 2.35
ABR-221ENST00000573559 ADAMTS2O95450 1211 aa29.74■■■□□ 2.35
ABR-221ENST00000573559 ABCA3Q99758 1704 aa29.71■■■□□ 2.35
ABR-221ENST00000573559 HAP1P54257 671 aaPredicted RBP29.7■■■□□ 2.35
ABR-221ENST00000573559 MARF1Q9Y4F3 1742 aaKnown RBP29.69■■■□□ 2.34
ABR-221ENST00000573559 SLC24A1O60721 1099 aa29.69■■■□□ 2.34
ABR-221ENST00000573559 C8orf37Q96NL8 207 aa29.69■■■□□ 2.34
ABR-221ENST00000573559 AKAP12Q02952 1782 aa29.68■■■□□ 2.34
ABR-221ENST00000573559 RGS17Q9UGC6 210 aaPredicted RBP29.68■■■□□ 2.34
ABR-221ENST00000573559 TMF1P82094 1093 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms